KEGG   Hydractinia symbiolongicarpus: 130614565
Entry
130614565         CDS       T09218                                 
Name
(RefSeq) nucleoporin SEH1-like
  KO
K14299  nucleoporin SEH1
Organism
hsy  Hydractinia symbiolongicarpus
Pathway
hsy03013  Nucleocytoplasmic transport
hsy04150  mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:hsy00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    130614565
 09130 Environmental Information Processing
  09132 Signal transduction
   04150 mTOR signaling pathway
    130614565
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hsy03019]
    130614565
   04131 Membrane trafficking [BR:hsy04131]
    130614565
Messenger RNA biogenesis [BR:hsy03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     130614565
Membrane trafficking [BR:hsy04131]
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    130614565
SSDB
Motif
Pfam: Beta-prop_THOC3 WD40 Beta-prop_WDR5 WD40_Prp19 Beta-prop_WDR3_1st Beta-prop_EML_2 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 Beta-prop_RIG_2nd Beta-prop_WDR3_2nd ANAPC4_WD40 Beta-prop_IFT140_1st EIF3I WDR55 WD40_MABP1-WDR62_2nd Beta-prop_TEP1_2nd WDR90_beta-prop_4th Beta-prop_WDR90_POC16_2nd Beta-prop_EIPR1 Beta-prop_Vps41 Ge1_WD40 Beta-prop_WDR35_TULP_N Beta-prop_WDR36-Utp21_2nd Beta-prop_TEP1_C Beta-prop_WDR19_1st NBCH_WD40 Beta-prop_EML
Other DBs
NCBI-GeneID: 130614565
NCBI-ProteinID: XP_057291974
LinkDB
Position
11:12841866..12850720
AA seq 361 aa
MYLAKSIPTEHKDIIHDVSFDFYGRRMATCSSDHTVKIWDLYDNGEWVCKADWKTHSGSV
WKVTWAHPEFGQVIATCSFDRTAVVWEEQVGEVSTSSHGRANQWIQRASLVDSSNSVTDL
KFSPKHLGLLLAMCYKDGVVRIYEAPDVMNLSHWSVQHVINCKLASASCISWNPSRSHAP
MLAVGSDDPRPTAGGKVEIHECSSSGRKWTKIATLMGITDPVHDVAFAPNVGRSRHLLAI
ASKDIHIVAMKPLKEKPSQSASGFPEKPDITVIATLQEHEAQVWRVEWNLTGTILSSTGD
DGRVRLWKANYLDNWKCIAEMKGDDSQAQQNATPQRSMSTTSTTGQNVIDITTLQKTHPL
F
NT seq 1086 nt   +upstreamnt  +downstreamnt
atgtatctcgcaaagtctattccaacggaacataaggacataatacatgatgtttcattt
gatttctatggcaggcgtatggcaacatgttcttctgatcacactgtgaagatttgggat
ttatatgataatggagaatgggtttgtaaagctgattggaagactcattcaggctctgta
tggaaagtaacatgggcacacccagaatttgggcaggtaatagcgacatgctcatttgat
cgtactgcagttgtatgggaagaacaagttggtgaagtgagcacttcgtcacatggaaga
gcaaatcagtggattcaaagagcttccttggttgacagcagtaattctgtgactgattta
aaattctcacctaaacatcttggtcttctcttggcgatgtgttacaaagacggggtagta
agaatatacgaagctcctgatgtaatgaatcttagccactggtctgtacagcatgttatc
aattgcaaattagcaagcgccagctgtatttcgtggaatccgtctagatcacatgcaccc
atgttggctgttggcagtgatgatccaaggcccaccgctggtgggaaggttgaaatacat
gaatgtagttcgtcgggaagaaagtggaccaagattgcaacccttatgggaatcaccgat
cctgtccatgacgttgcgtttgcaccaaacgttggaagatctcgacacctgcttgccatt
gcatccaaagatatccacattgtcgccatgaaacctctgaaagagaagccaagtcaatct
gcgtctggttttcctgaaaaacctgatatcacagttatcgctactctgcaggaacacgag
gcacaggtgtggagggtggaatggaatttaactggaactattttatcttcaactggtgat
gatggacgagtgcgtttatggaaagcaaattatctcgataattggaagtgcatagctgag
atgaaaggggatgacagtcaggcacaacaaaacgccaccccgcaaaggagcatgtcgact
acttcgacaacaggacaaaacgttatagatattacgacgttacagaaaacacatccgtta
ttttaa

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