Hydractinia symbiolongicarpus: 130614569
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Entry
130614569 CDS
T09218
Name
(RefSeq) probable ATP-dependent RNA helicase DDX27 isoform X1
KO
K13181
ATP-dependent RNA helicase DDX27 [EC:
5.6.2.7
]
Organism
hsy
Hydractinia symbiolongicarpus
Brite
KEGG Orthology (KO) [BR:
hsy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hsy03041
]
130614569
03009 Ribosome biogenesis [BR:
hsy03009
]
130614569
Enzymes [BR:
hsy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
130614569
Spliceosome [BR:
hsy03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
130614569
Ribosome biogenesis [BR:
hsy03009
]
Eukaryotic type
Pre-60S particles
Helicases
130614569
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
TilS_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
130614569
NCBI-ProteinID:
XP_057291977
LinkDB
All DBs
Position
11:8569607..8593852
Genome browser
AA seq
707 aa
AA seq
DB search
MADFLHGTKTINSDEELSLDDEEEVEKEESHMKGKKKKKTKIPSDFNNEFNMVFEKSDGS
DMWRIHGDIKSKAKGLVSSEILEEKIKAKRRERKINTLKENKDSENNEHEKESVVKKENE
EIQESDDEDDVDFSESENESEPERENGDFFEQAPKQVKHESFVQMNLSRPLLKALNTLGF
LHPTPIQLSTIPLALLGKDICACATTGSGKTAAFMLPILERLLFKPKQSSVSRVLVLVPT
RELAIQVHSVSLSLAKHTNVQICIATGGLDSKTQEANLRKSPDIIIATPGRLIDHLHNAP
SFDLQTIEILVLDEADRMLEEHFKDQMKELIRLCPRGRQTMLFSATMTDEVEELASLSLN
RPVKLFVDHNTDVAKSLHQEFVRIRENREADRLAIVTALCCRSFNDHTLIFLQTKRLAHR
LRIILGLFGLKAAELHGDLTQLQRIEALEKYKNNDVDILVATDLAARGLDIAGVKTVISY
NMPTTIKSYIHRVGRTARAGKVGKSITLVGEKERKMLKEVVKNAHVPVKNRIISQEVVLK
YKQKLEELEKDIKDLLKQEEEEKELRIAEMQATRAHNLIVHRDKILSRPARTFIKTTKDK
NTKEKKSKNSVISAEDRKIAKEQEFQKRTMKRERKPKRIRACDENDNPKTKTKGSKKAKL
VPAKTSFSKELTDTSRRGLKALRSTEHIPKKKKVAGGFKSKNKYRRR
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atggctgactttcttcatggaacaaaaaccattaattccgacgaagagcttagtcttgac
gatgaggaggaagtagagaaagaagaatcacatatgaaaggtaaaaaaaagaagaagaca
aagattccatctgattttaacaatgaatttaatatggtatttgagaaatctgatggttca
gatatgtggcgaatccatggtgatatcaaaagtaaagcaaagggattggtatcatctgaa
attctagaagaaaaaataaaagcaaaacgtcgtgaaagaaagatcaatacactaaaggaa
aataaagacagtgagaataatgagcatgaaaaggaatcggtagtaaaaaaagaaaatgaa
gaaatacaagaatcagacgatgaagatgatgttgattttagcgaaagtgaaaatgaaagt
gagccagaaagagaaaatggtgatttttttgaacaagctccaaaacaagttaaacacgaa
agctttgtacagatgaatctatcccggccattgttgaaggctctaaatacacttggtttt
ttacatccaacaccaattcagttatctacaataccattagctttacttgggaaagacatt
tgtgcgtgtgctaccactggttctggtaaaactgctgcttttatgctacccatacttgaa
cgcttactatttaaaccaaaacaatctagtgtaagcagggtacttgtgttagtgccaaca
agagagttagctatacaggttcattcagtaagcttatctcttgcaaaacatacaaatgta
cagatatgtattgccactggtgggctagattccaaaacacaggaagctaacctgcgaaag
tcaccggatattatcattgctacacctggtcgattgattgaccacttacataatgcacct
tcctttgatcttcagacgattgaaatactggttctagatgaagctgacagaatgttagag
gaacactttaaagatcaaatgaaagagttgattcgattatgtcctagaggtcgacaaaca
atgctgttttcagctactatgacagatgaggtagaagaattggcttcactgtcactgaat
cgacctgtcaagttgtttgttgatcataatacagacgtggcgaagagtttacaccaagag
tttgtacgaatcagagaaaacagagaagctgatagactggcaattgtaacagctttgtgc
tgccgttcttttaatgatcacaccttaatctttctacaaaccaaacggttagctcacaga
ctgcgcattattctgggtttgtttggtttaaaagctgcagaacttcatggcgatctaaca
caattacagcgtatagaagcgcttgaaaaatataaaaacaacgatgttgatattcttgtc
gcaacagatcttgctgcaagagggttggacatcgctggtgttaaaacggttatatcatat
aacatgccgaccactataaaaagttatatccatcgggtaggaagaacagctcgagctggg
aaggttgggaaatcaataactttagtcggtgagaaggaacgtaaaatgttgaaggaggtt
gtcaaaaatgcgcatgttcctgttaaaaacagaattatatcacaagaagttgtgcttaaa
tacaaacagaaactggaagaattggagaaagacatcaaagatttgttaaagcaagaagaa
gaagaaaaggagttgcgtattgcagaaatgcaagccaccagagctcataatttaattgta
catcgagataaaattctgagtcgtccagctcgaacattcatcaaaactacaaaagacaaa
aataccaaagagaaaaaatcaaaaaattcggtcatatcagcggaagacagaaaaattgca
aaagaacaagaatttcagaaacgtactatgaaacgcgagagaaaaccgaaacgtattcgt
gcatgtgacgaaaacgataatccgaaaacgaaaactaaaggttcaaagaaagcaaaactt
gttcccgccaaaacttcattttcaaaagaactaacagacacaagtcgacgtggtttgaaa
gcactacgtagcacggaacatattcccaaaaagaaaaaagtggccggtggctttaaatca
aaaaataaatatcgtagacggtga
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