Hydractinia symbiolongicarpus: 130614735 Help Entry 130614735         CDS       T09218                                  Name (RefSeq) vam6/Vps39-like protein   KO K20183   Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39 Organism hsy  Hydractinia symbiolongicarpus Pathway hsy04140   Autophagy - animal hsy04148   Efferocytosis Brite KEGG Orthology (KO) [BR:hsy00001]  09140 Cellular Processes   09141 Transport and catabolism    04140 Autophagy - animal     130614735    04148 Efferocytosis     130614735  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:hsy04131]     130614735 Membrane trafficking [BR:hsy04131]  Endosome - Lysosome transport   Tethering complex    Hops complex     130614735 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Vps39_1 CNH zf-Vps39_C TPR_Vps41 Clathrin WD40_like Motif Other DBs NCBI-GeneID:  130614735 NCBI-ProteinID:  XP_057292160 LinkDB All DBs Position 11:complement(16793808..16818562) Genome browser AA seq 874 aa AA seqDB search MHDAFDCVAILEKLPLEIECIATSGNKLLVGTNKGHLLVYGIQEDLSSGRSDQRFEVELQ RSNKAFGRKPISQLVVEEQYGVLISLCDGMISVHDFDTYSCKTQFPKGKGVNYFAINTST YSGKDSMRLCTISKRKIQTYVWIKNEFQELHGELGLPETPRTVIWVGTYLCVGTKKEYML IKADSGHVINLFDTGKKQEPLIVPMPSGEIALCRDEVTVFLSIDTHGQHHQKHAVTWSDV PLDLQFSQPYIIAALSRNIEICSRDPRLLVQRIDITGTRNIVCGPHCYAASITHVWRLVP VLISTQVEQLIKDKEFKLALTLTSSIDNEGVKKKKMQQIKTLYAFELFYMKRFEEALKMF KEVDAEPTYVIGLYPDLLPEEYRKQLDYPSAPPKLSQGDLEKGFVSLTEYLTRIRNKSLS NQASAEIPGTTESRKMLLQIIDTSLLKCYLKTNENMIAPLLRLKDNNCHVEECERVLVKE KKVNELVLLYQSKGIHKKALDLLLRQADLPSSPLKGPKKTIEYLQKLGAEYIGLIFDYSK WVLKKTPEEGLKIFTNDIPEVEGLPRQKVLVHLENNAAQLVIKYLEHIIFDWKENRVEFH NKLITCYKEKIMPLLKDYLVSLFDSDIRKKAGKESGELGDLRSRLLFFLETSTSYQPMKL LRFFPQDVLFEERALLLGRAGRHEEALAIYIYVLKDAKMAEQYCRRQHEMNLDENRNVYL SLVKMYLKPNHLPSLGLSQSVFSKCSMKANVGAALTVLNTHYQKIDVSQALDLLPAATEV NDITVFLLNVLKDKMQERRNCLLLKSLLYAEHLQMHEQRVFYQSKKCTITEERACCVCHK RIGTSAFAMYPNDVIVHYYCCKDRRVCPPESFYF NT seq 2625 nt NT seq  +upstreamnt  +downstreamnt atgcatgatgcatttgactgtgtggcaatattggaaaaattgccattagagattgaatgt atagcaacatctggcaataaactgctagtagggacaaacaaaggccatctcctggtatat ggtattcaggaagatttatcaagtggaagatctgatcaacgatttgaagtagaacttcaa agatcaaacaaagcatttggccgaaagccaatttcacaacttgtagttgaggagcagtat ggtgtcttaattagtttatgtgatggtatgatcagtgttcatgatttcgacacatattct tgtaaaacccagtttcctaaaggcaaaggtgtcaactactttgcaattaatacttctaca tattctggtaaggattccatgaggttgtgcacaatttcaaaaaggaaaattcagacctat gtatggattaagaatgaatttcaggaattacatggtgagttaggattgccggaaacaccg cgaactgtcatatgggtcggaacatatctttgtgttggtacgaagaaggaatacatgttg atcaaagcagatagtggtcacgtgattaatttattcgacactggtaaaaagcaggaacca ttgattgttccaatgccatctggtgaaattgcactgtgccgcgacgaggttacagttttt ctgagtatagatactcatggtcagcatcatcaaaaacatgcagtcacttggtctgatgtg cctttagacttgcaattctctcaaccatatattattgcagctttgtctagaaatattgag atttgttctcgagatccacgcttgcttgtccaaagaattgatatcactggtacaagaaat attgtatgtggtcctcattgttatgctgcttccatcacacatgtttggaggcttgtccct gttctgatttcaacacaagtagaacagcttattaaggacaaagaattcaaactggcactt actctgaccagcagtattgataacgaaggtgtaaaaaagaaaaaaatgcaacagattaag acactgtatgcatttgagttgttctacatgaaacgttttgaagaggctttgaaaatgttc aaagaggtcgatgcagaacctacttatgtcattgggttgtatcctgatttacttcctgag gaatatcgaaaacaacttgactacccatcggcacctcctaagctgtctcagggtgatctg gaaaaaggttttgtatcactcacggaatatttgaccaggatacgaaataaaagtttgtct aaccaggcaagtgcagaaataccaggaacaaccgagtcacgtaaaatgttgttacaaata attgacacttcattactaaagtgctacctaaaaacaaatgaaaatatgattgcgccactg ttacgattaaaggataacaattgtcatgtagaagaatgcgagagggtacttgtcaaagaa aaaaaagtcaatgaactagttttactttaccaaagtaaaggcattcacaagaaagcgtta gatctgctattgcgtcaggccgatttaccatcaagtccactgaagggtcctaaaaaaact atagagtatttacaaaaattaggagcagaatatattggattgatattcgattattccaaa tgggttttgaaaaaaacaccagaagaaggtttaaaaatattcacgaacgacattcctgag gttgaaggactgccaagacagaaagttcttgtacatttagaaaacaatgcagctcagtta gtgataaaatatctggaacatattatatttgattggaaagagaacagggtagaatttcat aataaattgattacttgctataaagagaagataatgcctttattgaaagactatctggtg tcattatttgacagtgatatcagaaagaaagctggaaaggaatctggcgagctaggggac cttcgatctagactgctattctttttagagacatcaacaagttaccaaccaatgaaatta ctccgtttttttcctcaagatgtattatttgaagagagggctttgcttttgggacgagct ggacggcatgaagaagctttagcaatctatatctatgtgttgaaggatgcaaagatggct gaacagtattgtagacgtcagcatgagatgaatttggatgaaaataggaacgtttacctc agcttggtaaaaatgtatttaaagcctaatcatttgccatcattgggattatcacaatct gtattttctaaatgttcaatgaaagcaaatgttggtgccgctcttactgtgttgaatact cattatcaaaaaattgatgtttctcaggcattagatttgttgccggctgcaacagaagta aatgatattacagttttcttgttgaatgttctaaaggacaaaatgcaagaaagaagaaac tgtcttttgttgaagagccttttgtatgcggagcatttacaaatgcatgagcaaagggtg ttttatcaaagtaagaaatgtactatcactgaagagagagcgtgttgtgtatgtcacaaa agaattggtacaagcgcatttgctatgtatccaaatgatgttattgttcattactactgt tgtaaagaccgacgtgtttgccctcctgagagtttttatttttag

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