Hydractinia symbiolongicarpus: 130614875
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Entry
130614875 CDS
T09218
Name
(RefSeq) nuclear pore complex protein Nup93-like isoform X1
KO
K14309
nuclear pore complex protein Nup93
Organism
hsy
Hydractinia symbiolongicarpus
Pathway
hsy03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
hsy00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
130614875
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsy03019
]
130614875
Messenger RNA biogenesis [BR:
hsy03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
130614875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nic96
ANAPC3
Motif
Other DBs
NCBI-GeneID:
130614875
NCBI-ProteinID:
XP_057292324
LinkDB
All DBs
Position
11:complement(12263146..12274777)
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AA seq
817 aa
AA seq
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MSNVSFSDLLHCAEQLTADVDTGTELPRIERNLPQLAEASQRLLSKTWTNVGEGSDVKAS
LLLSTKGVELPKLSQRLESLNTTKTFEPIEPLVETDIHGFLKNERENSILATIEETKRKT
FVNAEKQFWDSLENEWEREKQKILNSLLSAGKQALSFPVDAGRFEENSISKGRSTLSAIE
MAYARQVYLCNELSINGQKYNFLEALKQVGLKTEDINVKDLWGLVEQIILNLPLQENNTR
KLRQSKEFQTSLVTNAKMFLEDRYRGFIEKRVHDNLQQAHLGGVPGLYNYVQSYLKIKMM
STASGYEDGYVNGVPVWPLVYYCLRCGDVEATKQAAEALPPQYSEFKTYLKEYFASNERR
LHPNNEAKLRVEYKRTVRSSPDPFKRIVYCIVGHCDSTDPHPDVAKKTDDYIWLKLNQIQ
FANADHMNQEGNTLQSLQKLLLEEYGESHFRAYDQPYLYCRVLFLTGQFEAGLEFLSRLD
HCRSHAVHIAIVLKMQKLLLTPDLIHAPLLSADTLDPPPLKRLNYARLITIYTRKFEVTD
PREALEYFYLLRHLNSPNGDNLFASCVSELALETREFETILGCINPDGSKKAGSVSKFEL
DVTNIIATVAKDAENKGQFEDAAMLYDLSDKHEKVLELLSNLLCQLVSLANSPQSSRQRI
QTLSRSIAERYKTRGHNGSRMRSSTFYLLLDLMYYFDLYQEQQYDSSLDVMQKIKLIPLS
VDEVDLKVSSFKQYSDEVRQCLPDVLLAVMNTLYEKYKRSKISSQSSYMGVRKEKDESFL
SNLRKQAGAIVTFAGLLPYRMPGDTNARLVQMEVMMN
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
atgtctaatgtttcgttttccgacctcttgcattgtgcagaacagttaactgctgatgtt
gatactggaactgaacttccaagaattgaaagaaacttgccacagttggctgaagcatca
cagagattactttcaaaaacttggacaaatgttggggaagggtctgatgtaaaagcatct
cttttgttgagtacaaaaggtgttgaacttccaaagttgtcacaaaggctggaatccctt
aacaccaccaagacatttgagccaattgagcctcttgttgaaacggatatacatgggttt
ttaaaaaatgagagagaaaactcaattcttgcgacgattgaagaaacaaagagaaaaaca
tttgttaatgcagaaaaacaattttgggacagtttggaaaacgaatgggagagagaaaaa
caaaaaatattaaattcattgcttagtgcaggaaaacaagcgctcagttttcctgtcgat
gcaggaagatttgaagaaaattccatttccaagggaaggagtacactcagtgctattgaa
atggcatatgcacgtcaagtttatctgtgtaatgaattaagcataaatggacaaaaatat
aatttcttagaggccttaaagcaggttgggttaaaaacagaggatattaatgttaaagat
ctatgggggttggtcgaacaaatcatcttgaacttgccacttcaggaaaataacacgcgt
aagctaaggcagtccaaagaatttcagacaagtttagtaacaaatgctaaaatgtttctc
gaagacagataccgaggttttattgaaaagcgtgtgcatgataacttgcaacaagcccac
ctgggtggtgtaccaggattatacaattatgtacaaagttatttgaaaataaaaatgatg
agcactgcttctggctatgaggatggttatgtgaatggtgttcctgtatggcctttagtt
tattattgtttacggtgtggggatgtcgaagccacaaaacaagcagcagaagccttgcct
cctcaatactctgaattcaaaacatatttaaaggaatactttgcaagcaatgaacgtcgt
ttgcaccccaacaatgaagctaagctgcgagtggagtacaagaggacagttcggtcaagc
cctgatccttttaagcgcattgtgtattgtattgttggtcattgcgattcgactgaccca
catccagatgtggcaaagaaaaccgatgattatatatggttaaaattaaaccagattcaa
tttgcaaatgctgaccatatgaatcaagaaggcaatacactgcaaagtttacaaaaatta
ttgcttgaagagtatggtgaaagtcatttccgagcatatgatcagccatacctctattgt
cgggtgttatttttaacagggcagtttgaagctggtttggagtttttgtcacgccttgac
cactgtcgaagtcatgctgttcacattgctattgtattaaagatgcaaaagttgttactg
accccagaccttattcatgctccactcttgtctgcagatactctggatccacctccatta
aagcggctaaattatgctagactaattacaatatacacaagaaaatttgaagtcacggat
ccaagagaagccttggagtatttctatttactgaggcatctgaacagtcccaatggtgat
aatttgtttgcttcttgtgtcagtgaattggctcttgagacaagagagtttgaaaccata
ttaggatgtattaatccagacggttcaaaaaaggctggctctgtgtcaaagtttgaattg
gatgtcacaaatataatagcaacggttgcaaaggatgctgagaataagggacaatttgag
gatgctgctatgttgtacgatctatccgataaacatgaaaaggtgttggagttattgagt
aatcttttatgccagcttgtatccctagccaacagtccacaatcctctcggcaacgtatt
cagacactgtctagatctattgcagaaaggtacaaaacacgtggccataatggtagccgc
atgagaagttcgacattttatttgctgcttgatcttatgtactattttgatttgtatcaa
gagcaacagtatgactcttcacttgatgttatgcagaaaattaagttaattccattgtcg
gttgatgaagtggatttgaaagtttcgtctttcaaacaatacagcgatgaggtacgtcaa
tgcttacctgatgttttattggctgtgatgaacacattatatgagaaatacaagagaagc
aaaatttcttcacagtcatcatatatgggagtacgtaaagaaaaagatgaatcatttttg
agcaacttgagaaaacaagcgggagctattgtgacgttcgctggtttgttgccgtatcgt
atgcctggagatacgaatgctcgattggtacaaatggaagtgatgatgaattga
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