KEGG   Hydractinia symbiolongicarpus: 130621177
Entry
130621177         CDS       T09218                                 
Name
(RefSeq) splicing factor 3B subunit 1-like
  KO
K12828  splicing factor 3B subunit 1
Organism
hsy  Hydractinia symbiolongicarpus
Pathway
hsy03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:hsy00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    130621177
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:hsy03041]
    130621177
   03036 Chromosome and associated proteins [BR:hsy03036]
    130621177
Spliceosome [BR:hsy03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    130621177
 Complex B
    130621177
 Complex C
   U2 SnRNP specific factors
    130621177
Chromosome and associated proteins [BR:hsy03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    130621177
SSDB
Motif
Pfam: SF3b1 PPP2R1A-like_HEAT TOR1L1_N HEAT_EZ HEAT_EF3_N HEAT_ECM29 Htt_N-HEAT_1 HEAT_2 XMAP215_CLASP_TOG Cnd1
Other DBs
NCBI-GeneID: 130621177
NCBI-ProteinID: XP_057292479
LinkDB
Position
12:23943346..23957644
AA seq 1330 aa
MTDIETQIKELQNLRKAENGNDKENNDEESTAKGIAFGTAVEAELYGNGDKYAGYDMSIA
TNDQEDDEDDYSAASLGTSKLSSFTAPQAVLNDLAKNGSNVDPFADHKRPTIADRQNEYQ
QRMRNLLISPARTDPFADGGKTPDPKLRSYTDVIKEQRLIKEQAAVVKKIQEKAKAGELT
VQPEVKKKRRRWDQTTGDEVPAKKKWDQAETPSNSRWDETPGRTKPTGAETPSFVGNETP
GTLRGEETPGRTPGATPSARMWEATPSYIPSGSATPGAATPGGTTPSGQSSRRKRWDETP
GRATETPGRTPGWAETPKTDRTGAETPGMTPTPGGKRRSRWDETPQVGSTPSSATPSSAT
PLGMGTPAGTPSMITGTPGVTPGGTVAMHMQTPTPGHLISMTPEQMQAYRWEKEIDERNR
PMTDDELNALMPFDGYKVLQPPANYQPIRTPARKLAATPTPLNMGTGFRMQTDERGNVKG
VIEEQPPGNLPSLKPDDYQYFDKLLVDVDETKLSAEEQRERKIMKLLLKIKNGTPPMRKA
ALRQVTDKAREFGAGPLFNQILPLLMSPTLEDQERHLLVKVIDRILYKLDDLVRPYVHKI
LVVIEPLLIDEDYYARVEGREIISNLAKAAGLATMISTMRPDIDNIDEYVRNTTARAFAV
VASALGIPSLLPFLKAVCKSKKSWQARHTGIKIVQQIAILMGCAILPHLRNLVEIIEHGL
VDEQQKVRTITALAIAALAEAATPYGIESFDSVLKPLWKGIKQHRGKGLAAFLKAIGYLI
PLMDAEYAYHYTREVMIILIREFQSPDEEMKKIVLKVVKQCCATDGVEANYIKEEILPEF
FKHFWTHRMALDRRNYRQLVDTTVEVANKVGAAHIIGRVVDDLKDENEQYRKMVLETIEK
VMANLGASEVDSRLEEQLIDGILYAFQEQTNEDVVMLNGFGTVINAFGPRTKPYLPQICG
TILWRLNNKSAKVRQQAADLIARISYVMKTCGEEKLMGHLGVVLYEYLGEEYPEVLGSIL
GALKSIVNVIGMNKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEHVSARE
WMRICFELLELLKAHKKAIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQERQNRVCTTV
AIAIVAETCSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLE
DALMDRDLVHRQTACAAIKHMAIGVFGFDCEDSLTHLVNYIWPNIFETSPHVINAVIEAI
EGLRVGLGPLKLIQYILQGLFHPARKVRDVYWKIYNGLYIASQDALVAGYPSVPNEKENT
YLRNELHYFL
NT seq 3993 nt   +upstreamnt  +downstreamnt
atgacggacattgaaacacaaataaaggaacttcaaaacctcagaaaagcagaaaatgga
aatgacaaagaaaataatgacgaagagtctactgcgaaaggaattgcttttggcacagca
gttgaggctgaactttatggaaatggagacaaatacgcaggttatgacatgtctattgca
actaatgatcaagaagatgatgaggatgactattcggcagcctctcttggaacctcaaaa
ctatcatcatttactgcgcctcaagcagtgttaaatgatttggctaaaaatggtagcaat
gtcgatccatttgctgatcacaaaagaccaactattgcagaccgacaaaacgagtatcaa
caaagaatgcgcaatttgcttatatcacctgctcgaactgatccatttgctgatggtggg
aaaacacctgatccaaagttaagatcatacacagatgttattaaagaacaaagattgata
aaggaacaggctgctgttgtgaagaaaattcaagagaaagctaaagctggggagcttact
gtacaaccagaagttaaaaagaaaagacgacgttgggatcaaacaacaggtgacgaagtt
ccagcaaagaaaaagtgggatcaggctgaaactccttcaaatagtagatgggatgaaacc
ccagggagaaccaaacctactggagcagaaacaccttcatttgttggaaatgaaacacct
ggaacactaagaggtgaagaaactcctggtcgcactcctggagccacacccagtgctagg
atgtgggaagccaccccaagttacattccatctggatcggcaacacctggagctgccaca
cctggtggcaccaccccatctggccaaagttcgcgcaggaagagatgggatgaaactcct
ggtcgcgcaactgaaacacctggtcgaacaccaggttgggcagagacacctaaaacagat
agaactggtgctgaaacaccaggcatgacacccacccctggtggaaaaaggcgttcacgt
tgggatgagactcctcaagtgggatctactccaagttcagctactcctagttctgcaaca
ccattgggcatgggaacacctgcagggacaccatccatgattacaggtactccaggtgtt
acaccaggaggtacagtcgccatgcatatgcaaacaccaacaccaggtcaccttatatca
atgactccagagcagatgcaagcctatcgctgggaaaaagaaatagatgaaagaaacaga
cctatgacagatgatgagctaaatgctttgatgccttttgatggatacaaggtattgcaa
cctcctgctaactatcaaccaattcgtactcctgctcgaaagcttgctgctacaccaaca
cctcttaatatgggcacaggcttccgtatgcaaactgatgaacgtggaaatgtgaaaggt
gttatcgaggaacagccacctggtaacttaccaagcttaaaacctgatgactaccaatat
tttgacaaactcttggttgatgtggacgaaacgaaactcagtgctgaggaacagagagaa
cgaaagattatgaaattgcttttaaaaattaaaaatggtaccccacctatgagaaaggct
gcccttagacaagtaactgataaggcaagagaatttggagctgggccattattcaatcaa
attttaccgctactcatgtcaccgactttagaagatcaggaacgtcacttgcttgttaaa
gttattgatcgtattttgtacaagttggatgatcttgtacgaccatatgtccacaagatc
ttggtcgttattgagcctctgttaattgatgaagattattatgcacgtgtagaaggacga
gaaatcatttcgaatcttgccaaggctgccggtcttgctactatgatttccacaatgaga
cctgatattgataacattgacgagtatgttcgtaacacaaccgctcgtgctttcgccgtc
gttgcgtctgctcttggtataccttcacttctgccatttttaaaggctgtttgtaagagt
aaaaaatcttggcaagctcgtcatacgggtattaaaatcgtgcagcagattgccattctg
atgggatgtgctatactgccgcatctgagaaacttggtggaaatcattgaacacggtttg
gttgatgaacaacaaaaagtacgaactatcacagctttggctattgctgccttggctgaa
gccgctactccatatggtattgaatcatttgacagtgtgttgaaacctttatggaagggt
attaaacaacacagaggaaagggtttagcagcgttcttgaaagctattggttacttgatt
ccacttatggatgctgagtatgcgtatcattacacaagagaagtgatgattatcctgatt
cgtgagtttcagtctcctgatgaagaaatgaaaaagattgtgttaaaggtggttaaacaa
tgttgtgctactgacggtgtcgaagcgaattacatcaaagaagaaatccttcccgagttc
tttaaacatttctggacgcatcgtatggcgttagatagacgtaactacagacagctcgtc
gatactacagtcgaagtggcgaataaagtgggcgcggcgcatatcatcggtcgcgttgtg
gacgatttaaaagacgaaaatgagcagtacagaaagatggtgctggaaaccatcgaaaaa
gtaatggctaaccttggcgcttcggaagttgattctcgacttgaggaacagttgatcgac
ggcatcttgtatgcgtttcaagaacagaccaacgaggatgttgtgatgttaaacggattt
ggcactgtaatcaatgcgtttggtcctcgtacaaagccatacttaccgcagatatgtggt
acaattttatggcgtctaaataacaagtcggcaaaagttcgtcaacaggcagcagattta
attgcaagaatttcctatgttatgaagacatgtggagaggaaaaacttatgggtcatctt
ggcgtagtattgtatgagtatctcggtgaagagtatcctgaagtgttaggaagtatcctt
ggagcgttgaagtccatcgtaaatgttattggaatgaataaaatgactcctcctatcaaa
gatctgttacctcgtttgacaccaatcttgaaaaacagacacgagaaagtacaagaaaat
tgtattgatcttgttggaaggatcgctgatcgaggtgcagaacatgtaagcgcgcgtgaa
tggatgagaatatgtttcgagctgttggagttattaaaagctcacaagaaagctattcgt
cgtgccactgttaatacgtttggttatattgctaaagcaatcgggccacaggatgtcctt
gcaaccttacttaacaacctcaaagtacaagaacgtcaaaatcgtgtctgtacaacggtt
gccattgctattgtggctgaaacatgctcgcctttcacagtgctgccggctttaatgaac
gaatacagagtacctgaactgaacgtgcaaaacggtgtgttaaagtctctctccttttta
tttgagtatattggagagatggggaaagattacatttacgcagtcacgccactgttagag
gacgcgctcatggatcgggacttggtgcatcgtcaaacagcctgcgcagccatcaaacac
atggcgattggagtttttggatttgactgtgaagactcacttacacatcttgtaaattac
atttggcctaacatatttgagacgtcgcctcacgttattaatgctgtcatcgaagctata
gaaggactacgtgttggactgggtcctcttaaactaatacaatacatcctacagggactg
tttcatccagcccgaaaagtgagagatgtgtattggaagatttacaacggactttatata
gcatcccaggatgctttagttgccggctatccatcagttccaaacgagaaggaaaacact
tacctacgaaacgaactgcattattttctctaa

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