Hydractinia symbiolongicarpus: 130621490
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Entry
130621490 CDS
T09218
Name
(RefSeq) aladin-like isoform X1
KO
K14320
aladin
Organism
hsy
Hydractinia symbiolongicarpus
Pathway
hsy03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
hsy00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
130621490
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsy03019
]
130621490
Messenger RNA biogenesis [BR:
hsy03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
130621490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_Aladin
Beta-prop_THOC3
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_WDR19_1st
WD40
ANAPC4_WD40
Beta-prop_WDR5
WD40_Prp19
Beta-prop_RIG_2nd
Beta-prop_WDR3_1st
Beta-prop_IFT140_1st
Beta-prop_CAF1B_HIR1
Tricorn_2nd
Beta-prop_WDR36-Utp21_2nd
EIF3I
Motif
Other DBs
NCBI-GeneID:
130621490
NCBI-ProteinID:
XP_057292765
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Position
12:17210839..17234916
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AA seq
519 aa
AA seq
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MLKNVFCLLRPKEKKLSSMSTLAEFPPPGRQPTIGERNSKLVSTDESCVITDYRRIDLTD
TTSHTKSLACLETTCKAAFVNEEQHLIEKLQEEWNKNGFSGVFKELQSSKNVHTSIKSLS
LALHNGLELLSSWREKIMPKKTFHYTSNNSPLLACHPHLPRMAIVLKDQTIKVMTVNKIN
EQDVLLKDKRIKKVTCLAWRPKSSLSLAVGSSKGILVWLLDPNITTVRSGSNMTRFLQSR
DMSSDVNSISWSSDGKLLACSSVNSSCFWIWSIVSERNTPIHRVGSAITFVDWSPCGQKL
LSVNQSQTFRVWETMQWTCEKWADLNGTCSNACWSSCGSYLLFTVACEPIIYYVHFDSKS
NIDVGSTGVALKCADLSACVDTEDENEIGGLITDMVWDPTNSRLAVTCQGPSSNQPYVVL
FHTRIAPLLQLIPCGFIRGEDCEVPLKIDFLHGYDMGALMAVYWSSETISLIPLLYNQNL
SSSPRYHLAHINELNTTTNKNRDYSTVENETVIYSQFHD
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgttgaaaaatgtattttgtttgctaaggcctaaagaaaaaaagttatcaagcatgtca
acccttgctgagtttccacctccaggaagacaaccaacaattggagaaagaaactcaaaa
cttgtttcaactgatgaaagctgtgttataactgactacagaaggattgatttaacagat
acaacctcacacacaaaaagtttagcttgcttagaaactacatgcaaagcagcttttgtt
aacgaagaacaacatttgattgagaaacttcaagaagaatggaataaaaatgggttttca
ggagtatttaaagaacttcaatcttcaaaaaatgttcatacttctataaaatcgctgtca
ttagcgcttcacaatggattggaactactaagctcctggcgtgaaaaaattatgcctaaa
aaaacatttcattacacatctaacaattcaccactattagcatgtcatccacaccttcca
agaatggccattgtgttaaaggatcaaacaataaaagtgatgacagtgaataaaataaac
gaacaagacgtcttgttaaaagataaaagaataaaaaaagtgacttgtcttgcttggagg
ccgaagtcgtcattaagtttggctgtgggtagcagtaaaggaattcttgtctggttattg
gacccaaatatcaccacagtaaggtctggttcgaatatgacgaggtttttacagtcacgt
gacatgtcttctgatgttaactcaataagttggagttcagatggaaagcttttagcatgt
tctagcgtcaactcatcctgtttttggatttggagtatagtgtcagaacggaatacccct
atacaccgtgtaggtagtgcaataacgtttgtggactggtcgccatgtgggcaaaaattg
ttatctgtaaatcaatcccagacattcagggtgtgggagacaatgcagtggacgtgtgaa
aaatgggctgatctaaacggcacttgttccaatgcttgctggagctcctgtgggtcttac
ttattgtttacagtggcttgtgaaccaattatatattacgttcatttcgatagcaaaagc
aatattgatgtggggagtactggagtagctttgaaatgtgcggatctgtctgcgtgtgtg
gatactgaagatgaaaatgaaataggtggacttattacagatatggtatgggatccaaca
aattcaagattagcagtcacatgtcaaggaccttcgagtaaccaaccatatgtcgttttg
tttcacacaagaatcgctccgttgttgcagctaattccttgtggttttattcgtggggaa
gattgtgaggttccattgaagattgattttttgcatggctatgatatgggagctctcatg
gctgtttactggtcaagcgagacgatctcacttattccacttttatataaccagaacttg
tcttcgtcacccagatatcatcttgcacacataaatgaactgaataccacaacgaataaa
aatagagattacagtacggtggaaaacgaaactgtaatatacagtcagttccatgattga
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