Hydractinia symbiolongicarpus: 130621650
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Entry
130621650 CDS
T09218
Name
(RefSeq) low-density lipoprotein receptor-related protein 5-like isoform X1
KO
K03068
low density lipoprotein receptor-related protein 5/6
Organism
hsy
Hydractinia symbiolongicarpus
Pathway
hsy04150
mTOR signaling pathway
hsy04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
hsy00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
130621650
04150 mTOR signaling pathway
130621650
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hsy04131
]
130621650
Membrane trafficking [BR:
hsy04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
130621650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_b
FXa_inhibition
DUF5050
EGF_LRP2
SGL
Ldl_recept_a
cEGF
Motif
Other DBs
NCBI-GeneID:
130621650
NCBI-ProteinID:
XP_057292960
LinkDB
All DBs
Position
12:5244198..5258955
Genome browser
AA seq
1725 aa
AA seq
DB search
MKRWIYLTILTYVVPILNEGLQTEDVLFTQNNAIYLYHISSRNYSKITEVLHQAIDDMDY
DFETQMMFFIVGKKNIYSMNLITKEVKVILTTDEMGLKNLQVDWITKKLYFSDIDTGRMK
VSNFDGSIQRVILSGITQYILINLSPTNGLLFYTDIHNDQNILARVNMDGSDRRILINGN
NIWPTVLTVDSTSKTVYWYNFMTTMIEKVSINGSNRQTFYQAKNIHVMALVGLRLFYSEL
SQTSITSCNIRGRNLSNCVTEVDGLQSVNSVRSYGKLSQPFLNSGCHIKNGGCSHLCLLR
QNGYSCGCPTGIKLLSDKHSCAREREKFLLLSIKSGLRIIYLDADEGMDVRLPFKKRGII
QGVDYDPVSRMIYWADSSEDGYVMRAHLNESRSEIVIPDGFTLPDTPAVDWVARNLYWTC
SKFKKIYVSRLDGSAHTVIIDSNLKEPRGLAVDPTEGRLYWSDWGDEAKIEAADLDGKNR
VVLVNTSLKWPNGISLDYQNQRLYWCDGGKGGLEFYDLRHKTRHKLGEEAISTHPYGVSV
MGDYIYWTDWMRTLYQFNLVTKKRKILMHSVADIMDVKAIDTNMKHGSNPCQLNNYNCSH
FCFHKSSGTPVCGCPDGYTLDETLKSCLPITGFILYSTGSYINLLPLDPSLVSSVPKKKG
HVISHVAALSRKHQIIWVENTHDGGHAKIKTGLINNTDQDSVIQKGFYKAIGGFDVDFIS
ENIYWSQRNLNRIEVSRIDGRFRKTLVHTEKKGVKSTLLSVNPVIRKLYWFEVQGIHSCL
LESNLNGSSQRVIKNITGEVTGLAVDVNDSRIYYISKMSFHNIESIDLNGKDHRVVVSSL
GTSVGLTVFRDRLYFCELEREDSVVSAISSVKKQDGSGMKKLKEEVAWFHDVAALYDRLD
AGENICDQNNGGCEHLCFATAVGARSCMCENHYKLSIDNTSCIGPKKFVLLSEKSVIYRV
SLQEQEAEVPLHIPFEISVNSIGYNIQTATVYWLDERTNEIKFPSRDVNKTVDLGIEGGK
PISFAIDFFTNTLYWIDKNNHTIHFVNLYDRQKSGVIFDNKKYHPTKLIVLPERGLVFFI
NTFLSRNNHGADSIESMNMDGSNVKRLHLFNEKDIPKRLRQTQPNTVVKPTYDIAVDQKS
NRLFWVHMTEYRIYSMDFNGQKKRERVAFHGNEYKAKAIAVHENLLYWVDNEIKTAREKL
KRSELHHLEQNRKISYFPRIYELVNDILVVDFTRMEVDNPCKIDNGGCSHVCYSTLTKSG
HTVTQCGCPLGYVLPYGNTTHCTVRDRKTCPVVCNNQCQVPTTHCSEITECEIGLTESDC
TCREKEFRCVRGNCVPASAMCDGTFHCVNGEDEDERSCRIFFTVFIDSTKDKISTLTPTK
TVKIHDEGSEYSYTAGIISGALVTTLIFVCVLYIVCMRHHKRMRLLNKDQNLQTKYTVSE
EPVIFFPSIGDRQKSVAESLISTGVTLAPNFDLRYITGSSTAVADSVLLPLNPPPSVMSS
EMTLSRRADDYNSNYYDERELPVPPATPLYMPSDVESILTDNEKVASIKPKVQQPPQCIY
CQKESCGYMSQTSSTDGVSCVNPPSLASSYISSNRKPFYRSHRYISLETLNSQPLTRKLS
YLTSIADTVGNEERILPSPASEASFSRYASEESVVTVRELKNSEDEDGFSSSANFCSYAP
PPSPGTEYASDMNDFQEFRHDEEEAFEVDFLLDSHRSVSMESGLF
NT seq
5178 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgctggatatatttaacaatattgacttatgttgttcctattcttaatgaaggt
ctacagactgaagatgtgctatttactcaaaacaatgctatttatttgtatcacatcagt
agtagaaactacagcaaaatcactgaagtccttcatcaagccattgatgatatggactat
gactttgaaacacaaatgatgttcttcattgttggtaaaaaaaacatctactccatgaat
ttgataacaaaggaagtaaaggtgatattaactacagatgaaatgggactgaagaatcta
caggttgactggattacaaagaaattatacttctctgatattgacactggtcgaatgaaa
gtttctaattttgatggttctattcaacgtgttatattaagtggtattacccaatacatt
ttaataaatctgtctccaactaatggtttgttgttctatactgatattcataatgatcag
aatatattggctcgagttaacatggacggcagtgatcgtcgcatattgattaatggcaac
aacatctggccaactgtccttactgttgattcaacgagcaagactgtttactggtacaat
ttcatgacaacaatgattgaaaaagttagcataaatgggtcgaatagacaaacattttac
caggcaaaaaatattcatgttatggcccttgttggtttaagacttttttattctgaattg
agccaaaccagcataacttcatgtaatattcgaggtagaaatttatcaaattgtgtcaca
gaagttgatggactgcagtcagttaactctgtaagaagttacggaaaactctcgcaaccc
ttcttgaattctggatgtcatatcaaaaatggtggttgtagccacttgtgtttgcttagg
caaaatggatattcatgtggttgtccaactggaattaagctgttgagtgataaacactca
tgtgcaagagaacgcgaaaagttccttttattaagtatcaagagtggtttgcgtattata
tacttggatgcagacgaaggtatggatgttaggttgccatttaagaagaggggaataatt
caaggtgttgattacgatcctgtttcaagaatgatttattgggcagattcgtcagaagat
ggctatgtaatgcgagcacacctaaatgagtcacgttctgaaattgttatacctgatggc
tttacattacctgatactccagctgtggactgggtggccagaaatttgtattggacatgt
tctaaattcaagaagatttatgtttcacgcttggatggctctgcgcatacagtcattata
gattccaatctgaaggaacctcgtggtctggcagttgatccaactgaagggcgattatat
tggagtgattggggagatgaagcaaagatagaagctgcagatttagatggtaaaaatcgt
gttgttctagtcaacacatcattaaagtggccaaatggcatatccttggattaccaaaat
cagcgcctatactggtgtgatggaggaaaaggtgggttggaattttacgacctccgacat
aaaaccaggcacaaacttggcgaagaggcaatttctacacatccatatggcgtttctgtt
atgggtgattacatttattggactgattggatgcgaactttataccagtttaatcttgtt
acaaaaaagagaaagatattgatgcatagtgtggcagacatcatggatgtaaaagcaatt
gatacaaacatgaaacatggcagcaatccatgccaattgaacaactacaactgcagtcac
ttttgttttcataaatcttctggtacaccagtgtgtggatgccctgatggttacacattg
gatgagacactcaaaagttgtttgccaatcactggctttatactgtactcaactggttca
tacattaatttattacctctggatccctcacttgtttcaagtgttccaaagaaaaaggga
catgtcatcagtcatgttgctgcactgtccagaaaacatcagataatttgggttgaaaat
acacacgacggcggccatgcaaaaataaaaacaggacttataaacaatactgatcaagac
agtgttattcaaaagggattttataaagctattggtgggtttgatgtagattttattagt
gaaaatatatattggtcccaaagaaatttaaatcgtatcgaagtatcaagaattgatggc
agatttaggaagaccttagttcatacagagaaaaaaggagttaagtccacgttgctttcg
gttaaccctgtgatcagaaaactttattggtttgaagttcagggaattcattcttgtttg
cttgaatcaaatttaaatggttcttcacaacgtgtaattaaaaatattactggggaggtc
actggtctggctgttgatgtaaatgacagtcgtatatattacatttccaaaatgagcttt
cacaatattgaaagcatagacttaaatggcaaagatcacagagtcgttgtctcttcactg
ggtacgtcagttggattgacagtttttagagatcgactttatttttgtgaactggaaaga
gaagattcggttgtctcagcaatttcgtcagtcaaaaaacaagatggttcaggtatgaag
aaattgaaggaagaagttgcttggtttcatgatgtagcagcgctctatgataggctggat
gcgggagagaacatttgtgaccagaataatggaggttgcgagcacttatgttttgcaacg
gctgttggagctcgaagttgcatgtgtgagaatcactacaagctcagcatagataacact
tcttgtattggtccgaaaaaatttgttttgctcagtgaaaagtccgtcatttatcgagta
tcgttgcaagaacaagaagccgaagtaccactgcatattccattcgaaatctccgtgaat
agtattggatataacattcaaaccgccacagtctactggttagatgaaagaaccaatgaa
atcaagtttccatcacgtgacgtaaacaaaaccgtagatttgggaattgagggcgggaaa
ccaatttcgtttgccatcgattttttcacaaacactttatactggattgataaaaacaac
cacactattcacttcgtgaacctatacgacagacagaaaagtggtgtaatatttgataat
aaaaagtatcatccaacaaagttgattgtgctaccagaaagagggttagtgttctttatc
aacacgtttttatcacggaacaatcacggggctgattcgatcgaatcgatgaacatggat
ggctccaacgtaaaacgactccatctcttcaatgagaaagacataccaaagcgactccga
caaacgcagcccaatactgtcgtgaagccgacgtatgatatagcggtggatcaaaaatcg
aacaggcttttctgggtgcatatgacagagtatcgaatttatagcatggattttaatgga
caaaagaaaagggagcgtgttgcatttcatgggaacgagtataaagcaaaagcaattgct
gttcatgaaaatttgttgtattgggtggataacgaaatcaaaacagcgcgagagaagtta
aagaggtccgagcttcatcatctagaacagaatcgcaagatttcttattttccgcgaata
tacgaactcgtgaatgacattctcgtggttgatttcacacggatggaagttgataatccg
tgcaagattgataatggcgggtgcagtcatgtttgttatagcaccctaacaaagagcgga
catacggtgactcaatgtgggtgcccacttggatacgtgttgccgtatggtaacacaaca
cattgcacagtgagagatcgaaaaacttgtcccgttgtgtgcaataatcaatgtcaggta
ccgaccactcattgcagtgaaattactgaatgtgaaattggattgacggagtcggattgc
acatgcagagagaaggagtttcgttgtgttcgtggaaattgtgtccctgctagtgctatg
tgtgatgggacatttcattgcgttaatggtgaagatgaagatgaaaggtcatgcagaatt
tttttcactgtttttatagactcgacaaaagataaaatatcaacgttgactccaacgaag
acagtgaaaattcacgacgaaggtagcgaatactcttacactgctggtataatctcgggt
gcgcttgtcacaactctcatctttgtgtgtgtgctttacatcgtgtgcatgcgccatcac
aaaagaatgagactgctcaacaaagatcaaaatcttcagaccaaatatacagttagtgaa
gagcctgttattttcttcccgtccattggcgatagacaaaaatcagtcgcagagtcttta
atttcgaccggagttactttagcgcccaacttcgatttaagatacatcactggctcttct
actgctgtggcagatagtgttttgcttccgttaaatccgccaccatcagtaatgtcttct
gagatgactctcagtaggagggcggatgattataatagcaactattacgacgagagggaa
ctccctgtaccgccagccacgcctctgtacatgccaagcgatgttgagtcgattctaaca
gataatgagaaagttgcttcaatcaaaccaaaagtgcaacaaccgccgcaatgtatttat
tgtcaaaaagaatcctgtggatatatgagccagacgtcgagtactgacggtgtgtcatgt
gtaaatccgccatctttggcaagctcttatatttcatcaaaccgcaaaccattttacaga
agtcatcgctatatttcactagagactttaaatagccaacctttgacacgtaagttgtct
tacctaaccagcatcgcggatacagtgggtaacgaagaaagaatattaccttcccccgcc
agcgaggcaagtttttcacggtacgcatcggaagaaagtgttgttaccgtaagggaatta
aaaaactccgaggatgaggatggattctcttcaagcgcgaacttttgttcttatgcccct
cctccgtcgccagggacagaatatgcatctgacatgaatgactttcaagagtttaggcac
gacgaagaggaagcgtttgaggtagattttttattggattcacaccgatcagtatcgatg
gaaagtggattattttaa
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integrated database retrieval system
