Hydractinia symbiolongicarpus: 130621689
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Entry
130621689 CDS
T09218
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1-like isoform X1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
hsy
Hydractinia symbiolongicarpus
Pathway
hsy03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
hsy00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
130621689
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hsy03021
]
130621689
03036 Chromosome and associated proteins [BR:
hsy03036
]
130621689
Transcription machinery [BR:
hsy03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
130621689
Chromosome and associated proteins [BR:
hsy03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
130621689
PBAF complex
130621689
GBAF(ncBAF) complex
130621689
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
MMR_HSR1_Xtn
Motif
Other DBs
NCBI-GeneID:
130621689
NCBI-ProteinID:
XP_057293002
LinkDB
All DBs
Position
12:24240258..24261923
Genome browser
AA seq
456 aa
AA seq
DB search
MFRPGLQGSPGPNMTGNWQRNMRASQSPAGMQMRQQNMGGQHTPEGVKRSSDGKSRSKSS
KKRKIKDRIITQQVIELVPESQAYMDLLAFENKLDSTIMRKRLDIQEALKRPVKQKRTLR
IFVSTNFYQPKAEDATRETFPAAVPEWEVRIEGRLIDDPLLQQKENNQKKKKFSCFFKNL
VIELDRDIYGPDNHLVEWHRTTGTQETDGFQVKRPLSVNKSIKCSIYMMMEYQPSKFKLS
AQLARVLGIHTQTRPMIISTLWQYIKRNKLQDPEEREYVTCDKYLKEIFSCDRMKFCEIP
QRLQVHLLPPDPIIIHYTVDPSKPEDKNPSCFDIDIDLDDSLRDIMQSFLLSTASQQEIA
SLESKIHETVEGINQLKVHRDFFLSFSTNPQKFMNDWLTSQCADLKTMTDVSGNPEEERT
SEFYNQPWAEEAVHRYFYRQVQLKRAELEQALGIRN
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgtttcgtccaggattgcaaggatccccaggtccaaatatgactggaaattggcaaaga
aatatgagagctagtcaaagtcctgcaggcatgcaaatgcgacaacaaaatatgggaggt
caacatactccagaaggtgtgaaacgttcttcagacggcaaatcacgctccaaaagttct
aagaagagaaagataaaagatcgtattataacacaacaggttattgagttagttccagaa
tcacaagcatatatggacttgcttgcttttgaaaataaacttgattctaccattatgcgt
aaaagactcgatattcaagaggctcttaagcgaccagttaagcaaaagcgaacactgcgt
atctttgtatcaactaacttttatcaaccaaaagcagaggatgctacgagagagactttt
cctgctgccgttccagaatgggaggttcgcattgagggacgtcttattgatgatccactt
ttacaacaaaaagaaaataatcaaaaaaagaaaaagttttcatgcttctttaaaaatctg
gtaatagagttggatcgcgacatatacggaccagacaaccatcttgtggagtggcatcga
acaacaggtactcaagaaacagatggtttccaggttaaaagaccgttatcagtaaacaaa
tcaattaagtgctccatatatatgatgatggaatatcaaccttcaaagtttaaactttct
gcacaactggccagagtgttgggaatacatactcaaactagacctatgataattagcact
ttatggcaatacatcaagagaaataagttgcaagatcctgaagaacgagagtatgtcaca
tgtgataaatatttaaaagagattttcagttgcgacagaatgaagttctgtgaaatacca
caacgtttacaagtccatcttctacctccagatcccattatcatccactataccgtagat
ccatctaaacctgaagataaaaatccatcctgctttgatatcgacatcgacctcgatgac
agtctacgtgatatcatgcaatcctttcttttatccaccgcaagtcagcaagaaatagcc
tcgcttgaatcgaagatccatgagacggttgaaggtatcaaccaattgaaggttcaccgt
gacttcttcctttccttctctacaaatccacagaaatttatgaacgattggctgacgtca
caatgcgccgatttaaagacgatgactgatgtgtcaggtaatcccgaggaagaacgcaca
tctgagttttacaaccaaccgtgggcagaagaagccgttcaccgttatttttacagacag
gttcaacttaagcgagctgaattagaacaagccttgggcatccgtaactga
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