Hydractinia symbiolongicarpus: 130622218
Help
Entry
130622218 CDS
T09218
Name
(RefSeq) WD repeat-containing protein 75-like isoform X1
KO
K14552
NET1-associated nuclear protein 1 (U3 small nucleolar RNA-associated protein 17)
Organism
hsy
Hydractinia symbiolongicarpus
Pathway
hsy03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
hsy00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
130622218
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hsy03009
]
130622218
Ribosome biogenesis [BR:
hsy03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
130622218
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR75_2nd
Beta-prop_WDR75_1st
WD40
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_EML
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT140_1st
Beta-prop_TEP1_2nd
Beta-prop_HPS5
Beta-prop_IFT122_1st
PEP5_VPS11_N
Motif
Other DBs
NCBI-GeneID:
130622218
NCBI-ProteinID:
XP_057293635
LinkDB
All DBs
Position
12:complement(6561267..6575026)
Genome browser
AA seq
861 aa
AA seq
DB search
MASVLEQHNTRSLNEKRGKRTRKKKLAQPNEKKDGEISPELVAVRCNKLGVGLAPVISKD
SKHVICACGKIVAIYRRKTGLLENTFDGHQTPINSLFLNEADPLQVISCSEREMIIWDYN
DLTIAKKYHLRVASSGCFQSSLKPNFVFCKTQDDSNKKQAVLMQCSLKKPYTTTKMGPVS
KNNKSAVVSLNGRYIAFIFKEKLSVYSISKEECFVHNYDDVHLACVAFHPNPKHVATGDM
NGKIIVWYNVCRPTKQVQSVLLHWHNSPVNDLLFTNDANYLMSGGTEGVLVIWQLETQHK
TFVPRIGGAINDIFQSSDSMFVGVTLDCNMIKILSAVDTKLTKTIKFLSEADDLSAGLTY
DPKSECVVTNDKASGVLQFYQPAQDIVKLNLDVVGENLISSVQERLVYPTRVRHVAFSDD
GIWMATVDVREDRILPVERKLKFWKYSEKEKSYTLNTLVNPPHEDEVYSAVFRPLNKTSK
YSHMVATTSKDGYIKTWVLQVGKDSQDKPVETWQLHSLGSYDKESCKQACFSSDGSLLAV
LFSEVTLWDPETLALQTNLAWNLPHENIKAISFGCHDSSQFLIGYSVNYLIVWDIKTCSV
KWQMEADVQLLAVDPYSKYFATCIRFEGDHKTHVYVFNPASPSPAALFYKINKHFDVPKA
AIFTPRKKPLNFKNVWEEMGHFYILTNSTEIITIKERREIEDEKNKKKIDVDDSQTSNFE
DIFGVTSKGKQSIKSSTPDIPLGNPSSVVLRKMMSTPAHVLPSVDVLCKTLMKSLLIQTP
KAKSGKKEEKRENDEDSDDQMEGDLLLTHLWLLLAAYAEFPKMENGVAARKKFYCARADT
KRCSLDQKRNNGKPLGISESF
NT seq
2586 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctgtattggaacaacataacacgaggtcactgaacgaaaaaagagggaagcga
acaagaaaaaaaaagttagcgcaacctaacgaaaaaaaagatggagaaatctcccctgaa
ttagttgctgtgcgctgtaataaattaggtgttggtttggcacctgtaatatctaaagac
tcgaaacatgtcatatgtgcttgtggtaagattgtggctatatatagaagaaaaacaggt
ctactcgagaacacttttgatggacatcaaacaccaattaatagtctttttttaaacgaa
gctgaccctttgcaggttatatcatgcagtgaacgtgagatgataatatgggattacaat
gacttgaccattgcaaagaaatatcatttacgtgtggcaagttcaggttgtttccaatct
tctctgaaacccaattttgtgttttgcaaaacacaagatgacagcaataaaaaacaggca
gttctcatgcaatgttcgttaaaaaagccttacacaaccaccaaaatgggtcctgtctca
aagaataacaaatctgcggtggtcagtcttaatggaaggtatattgcatttattttcaag
gaaaaactttcagtatattcaattagcaaagaagaatgttttgtacacaattatgatgac
gtgcatctcgcttgtgttgcatttcacccaaatccaaagcatgttgctactggcgatatg
aatggaaagattattgtttggtacaatgtgtgtagaccgacaaagcaagtgcagtctgtg
ctactccactggcataactcgcctgttaacgacttattgtttacgaatgatgctaattat
ttgatgtcgggtggaactgaaggagtactagttatctggcaacttgaaacacaacataaa
acatttgtacctcgaattggtggagctattaatgatatatttcaatccagtgacagcatg
tttgttggagttactcttgattgcaacatgataaaaatactttcagctgttgacacaaag
cttactaagacaataaagtttttatcagaagctgatgatttgagtgccggcctaacctat
gacccaaagtcagaatgtgttgtcaccaatgataaagccagtggggtgttacagttttat
caacctgcccaagatatagttaaactaaatctggatgtagttggtgaaaatttaatttca
tcagttcaagaaagacttgtttacccaacaagagttcggcatgtagcatttagtgatgat
ggaatctggatggctactgtcgatgtcagagaagatcgtatacttcccgttgaaagaaaa
ttaaaattctggaaatattcggaaaaggagaaaagttacacgttaaatactttggtgaac
ccaccccatgaagacgaagtgtattcagcagtatttcgtcccttgaataaaacatcaaag
tacagtcacatggttgcgaccaccagtaaagatggctacataaaaacatgggtgcttcaa
gttgggaaagattctcaagacaaaccagttgaaacatggcagcttcattcactgggaagc
tatgacaaagaaagttgcaaacaagcttgtttttccagtgatggttctttgttggctgtt
cttttttcagaggtaactttgtgggatcctgagacacttgcattgcaaaccaatttggct
tggaatctaccacatgagaatatcaaagccatcagttttggctgtcacgactcgtctcag
ttcctgattggctactctgttaactatttgattgtatgggacataaagacatgttctgtc
aaatggcaaatggaagccgatgtacagctactagctgtagatccttacagtaaatatttc
gcaacctgtattaggtttgaaggtgaccacaaaacacacgtttatgtgttcaacccagcc
tctccatcaccagctgcgctcttctacaaaatcaataaacattttgacgtgcctaaagct
gccatctttacaccaagaaagaagccgttaaacttcaaaaacgtttgggaagagatggga
catttttatattttaactaatagtacggaaataataaccatcaaagaacgtagagagatc
gaagatgaaaagaataaaaagaaaattgatgtagatgattctcaaacgtctaatttcgaa
gatatatttggagtcacttctaagggtaaacaaagcataaagagttcaacgcctgacata
cctcttggtaatccatcttcagttgtcttaagaaagatgatgtccacaccagctcatgtt
ttaccttcagtcgatgtgttgtgtaaaactttgatgaaatcactgctaattcagacacca
aaagctaagagcgggaaaaaagaagagaaaagggaaaacgatgaagatagtgatgatcaa
atggaaggcgaccttttattaacgcatctgtggctactgcttgcagcgtatgctgaattt
ccaaaaatggaaaatggcgttgcagccagaaagaaattctattgcgcacgcgcagatact
aagcgctgcagcttggaccaaaaacgcaataatggaaagcctttgggtatctctgaaagt
ttttaa
DBGET
integrated database retrieval system
