Hydractinia symbiolongicarpus: 130622237
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Entry
130622237 CDS
T09218
Name
(RefSeq) cytoplasmic dynein 1 intermediate chain 2-like
KO
K10415
dynein cytoplasmic 1 intermediate chain
Organism
hsy
Hydractinia symbiolongicarpus
Pathway
hsy04145
Phagosome
hsy04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
hsy00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
130622237
09142 Cell motility
04814 Motor proteins
130622237
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hsy03036
]
130622237
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
hsy04812
]
130622237
Chromosome and associated proteins [BR:
hsy03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Motor proteins
Dynein complex
130622237
Cytoskeleton proteins [BR:
hsy04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
130622237
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
Beta-prop_EML_2
Beta-prop_EML
WDR55
WD40_WDHD1_1st
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
EIF3I
Beta-prop_IFT140_1st
Dynein_IC2
Beta-prop_TEP1_2nd
Beta-prop_WDR19_1st
Beta-prop_TEP1_C
Beta-prop_HPS5
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
WD40_RFWD3
Glyco_transf_5
Tli4_N
Motif
Other DBs
NCBI-GeneID:
130622237
NCBI-ProteinID:
XP_057293662
LinkDB
All DBs
Position
12:complement(15215587..15230375)
Genome browser
AA seq
608 aa
AA seq
DB search
MADRKAELERKKKRLEEIRAARSKKTGSSPIATKMPLGETASSTFSDTASTTNEIDNILK
DFDLPSTPSVSSYGASDTHSVDSDSKPTSPPPARKAVNLSMCTREPVNVPPKELVHYEKQ
TQTIAVEIKSEEPELPVVKRVEETKEPNIQEEKDKKKEESAPKMVELSEEARNKIIHSQD
FVHFFDHAARIIEKAIYEEDFAFDYGAATDEGEGDSLTAKKLALNRKFCDERWSKHRCVT
CMDWSVQHSELLVASYNQNEDSPQDPDGIALIWNMKYHKHTPEYIFHNQSPIMSVCFAQF
HPNLLVGGSYSGQIVLWDNRSRKRTPVQKTPLSAAAHTHPVYCVEVVGTQNAHNLISFST
DGKMCSWSLDMLSQPQDVMDLQHTHSKAVSVTSASFLPGDVNNFVVGSEDGSVYSALRHG
SKAGIAEQFEGHHGPVTAIDYNAVPGAIDFSHLFLTSSFDWTIKLWSNKSSKVLYSFEDN
GDYVYDVQWSPIHPALFASVDGMGKLDLWNLNHDTEVPTTSVTVEPLAAINRVKWAGSGH
QLAAGDDDGCIYIYDVGEQLAVPRPEEWNRLVGTLQELQANAITVGESERSLSPTSSLTS
NLISPSRT
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atggcagacagaaaggcagaattggaacggaaaaaaaaaagattggaagaaattcgagct
gccagaagtaaaaagactggttccagtccaattgccactaaaatgccattgggtgaaaca
gcatcttcaacattcagtgacactgccagtactacaaatgaaattgataacattttaaaa
gattttgatttaccctctaccccttcagtatcttcctatggtgcatcagacactcactct
gttgattcagacagtaagccaacctcaccacctcctgctcgtaaagcagtaaatttatca
atgtgcactcgtgagcctgtcaatgtcccaccaaaggagttggtgcactacgagaaacaa
acacagacaattgcagtagaaataaaatctgaagaacctgaacttccagtagtcaaaagg
gttgaagaaacaaaggagccaaacatacaagaagaaaaagacaagaagaaagaagaaagt
gctccgaaaatggtggaacttagtgaagaggctcgtaataaaattatacactcccaagat
tttgtccactttttcgatcatgctgcccgtattattgagaaagcaatttacgaggaagac
ttcgcattcgattatggtgctgccactgatgaaggagaaggagattcgctgactgcaaaa
aaattagcattaaatcgcaagttttgtgatgaaagatggtccaagcacagatgtgtaaca
tgcatggattggtctgttcagcattcagaacttttagtcgcttcttacaatcaaaatgaa
gactctccacaagatccagatgggattgctttgatttggaatatgaagtatcataagcat
acgccagagtacatctttcataatcagtcgccaattatgtctgtttgtttcgcccaattt
catccaaatcttttggtgggtggttcatactctggtcaaattgttctgtgggataacaga
agtcgaaaacgaactcccgtccaaaagacaccactgtcggctgctgctcatacacatcct
gtctactgcgttgaagttgtgggcacgcaaaacgcacacaatttaatcagcttctcaact
gatggtaaaatgtgttcatggagtttagatatgttgtctcaaccgcaagacgtgatggat
ttacagcacactcattcaaaagcggtgtctgtaacaagtgcttcctttctacctggtgac
gtcaataattttgttgttggaagcgaagatggatctgtgtactcagccttacgtcatgga
agtaaagctggtattgctgaacaatttgaaggtcaccatggtccagttacagcaatcgat
tataacgctgttcctggagcgatcgatttttcccacctttttttaaccagctcatttgat
tggacgatcaagttgtggagtaacaaaagttcaaaagtgctgtattcatttgaagacaat
ggcgattacgtgtacgatgttcagtggtcgcctattcatcctgctctcttcgcatctgtt
gatggcatgggaaagttggatttatggaatctcaaccatgacactgaggtcccaaccaca
agcgttactgttgaaccgttagcagctattaaccgcgtcaaatgggcaggatctgggcac
cagctagctgcgggtgatgatgacggatgcatatacatctatgatgtcggcgagcaactt
gctgttcctcgacctgaagaatggaatcgactggtaggtacgctgcaagagctacaagct
aacgctatcactgtcggtgaatccgagaggtcgttgtcacccacatccagcttaacttct
aatttaatctcgccctcaagaacatag
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integrated database retrieval system
