Hydractinia symbiolongicarpus: 130622258
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Entry
130622258 CDS
T09218
Name
(RefSeq) gamma-aminobutyric acid receptor subunit beta-3-like
KO
K05181
gamma-aminobutyric acid receptor subunit beta
Organism
hsy
Hydractinia symbiolongicarpus
Pathway
hsy04080
Neuroactive ligand-receptor interaction
hsy04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
hsy00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
130622258
04082 Neuroactive ligand signaling
130622258
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
hsy04040
]
130622258
Ion channels [BR:
hsy04040
]
Ligand-gated channels
GABA-A
130622258
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
PIG-P
Ribosomal_L25p
Motif
Other DBs
NCBI-GeneID:
130622258
NCBI-ProteinID:
XP_057293683
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Position
12:7061562..7074498
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AA seq
512 aa
AA seq
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MEQFFYRLVAMAVLLLLYLDISSSANEKLDKVKNKTKEPKEELENKYITDPASAQWQIQC
GKLNWSISDGCNISGLLHSLLLNYDKRLRPLMDKQTPVTVIVGFWILSIDSINVIDMDYQ
IDFFFRQSWQDPRLEHSYPQTLTVSNSMLEKIWVPDTYFENSKNSHFHAVTVPNKMLKIK
PDGTIMYNARISVRASCPMDLRMFPMDIQECNLNIESYGYSTRDIKFEWEKSDSRISIGT
KVRTLPQYNLTGFKTTSKETVYVVGNWSGLTATFVLERRTGYFFLHLYAPCALIVMISWI
SFCIPKDSTAARVALGITSVLTITTILNMLNTAMPKVSYIKAVDWYLIVSFLFVFAVLIE
YTLVLYLTDKEKQSRNQKLEQLKKSRLRNEGKTPAVANGHTANGKATEVRSRAYHNNQKE
TSFDCSDIDKHSYPSKPLIVVLEGKHFPHNRHADVDEDHSMSLKTNVGRFLCQFRVDIID
EYSRMIFPIAFATFNTVYWLLFFSKKSSSNPG
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atggaacaattcttttaccgactggttgctatggcagtattgttgttgctatatttggat
ataagcagttcagccaatgaaaagttagataaagtaaagaacaagacgaaagaacctaag
gaagaattagaaaacaaatatataacagatcctgccagcgcacagtggcaaattcaatgt
ggaaaattgaattggtcaattagcgatggatgcaatatctctggtctactgcattcgctg
ttattaaattacgataaaagactacgacctttaatggacaagcaaacgccagtgacagtg
attgttggattttggattttatcaattgattccatcaatgttattgatatggattatcaa
attgattttttcttccgtcaaagctggcaagatccgcgtttagaacattcttaccctcaa
acgttaactgtttcaaattcaatgttagaaaaaatctgggttcctgatacatattttgaa
aattctaaaaactctcattttcacgctgtgactgttccaaataaaatgttgaaaattaaa
ccggatgggacgattatgtacaatgccagaatatctgtccgagcctcctgtccaatggat
ttgcgaatgtttcccatggatatacaggagtgtaacctaaacatagagagctatggttat
agcacaagagatataaaatttgaatgggagaaaagtgactccagaatatctatcggcacg
aaagtccgtaccctgccacagtataatttgaccggctttaaaacgacaagtaaagaaaca
gtttacgttgttggaaattggtctggtttaactgctacatttgtgttagaaaggcgtact
ggttatttctttcttcatttatatgcaccatgtgctctcatcgtcatgatttcatggatc
agcttctgtattccaaaagattcaacagcggcacgtgtagctttagggatcacatcagtg
ctgacaataacaacaattttgaacatgctgaatacagcgatgccaaaagtatcttatatt
aaagcagtggattggtatctaatagttagttttttgtttgtgttcgccgtgttgatcgag
tatacgttagttttgtatttaactgataaagaaaagcaatcaaggaatcagaagttagaa
caattgaagaaaagtagactaaggaatgaaggaaaaacgcctgcagtagcaaatggacat
acagcgaatggtaaagcaactgaagtgcgttcaagagcatatcataacaatcagaaggag
acttcatttgattgctcagatatcgataagcattcgtatcctagtaaaccactgatagtt
gtattagaaggaaaacatttccctcacaataggcatgctgatgttgatgaggatcattca
atgtccttaaaaacaaacgtgggaagatttttatgtcaatttcgtgtcgatattatagac
gaatattctagaatgatttttccgattgcgtttgcgactttcaatacagtgtattggtta
ctgttcttcagtaagaagagtagttctaacccaggatga
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