Hydractinia symbiolongicarpus: 130622396
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Entry
130622396 CDS
T09218
Name
(RefSeq) vacuolar protein sorting-associated protein 16 homolog
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
hsy
Hydractinia symbiolongicarpus
Pathway
hsy04140
Autophagy - animal
hsy04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
hsy00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
130622396
04148 Efferocytosis
130622396
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hsy04131
]
130622396
Membrane trafficking [BR:
hsy04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
130622396
Hops complex
130622396
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps16_N
Vps16_C
CNOT1_HEAT
Motif
Other DBs
NCBI-GeneID:
130622396
NCBI-ProteinID:
XP_057293833
LinkDB
All DBs
Position
12:complement(15678184..15704484)
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AA seq
834 aa
AA seq
DB search
MTDDTPATIDWNPLGEVYYRKLEVYSMFWADRIDLNQYIVSAGAYGGPIALIKENSAEGG
NLNSRAVIHIFTSSGQEQAAFKWDGGRLVTMGWSNCEELICVAEDGAVHVFDMFGNFLRQ
FSLGLEIQRSFILEAKIFSSTYGTGICVLSGDYQFFVVNNINDVKVKPMQCPFTVEAPPS
SWAVLSLPDDQGTKVLMAIDNTIYELDSFQPKTKNPPISHPVKAFIEMAVSFNQKYVAMF
ADTGLLWIGSSNLQEVYCQYNTHLQLRPSQLVWCGSGAVVGYWDNYLMMVGPTKDIVKYF
VDSKVHLSQELDGVRIIGNYHQEFLQKVPVEVEDVFKLGSMKPGAMLHDASREYERKSAR
VDDYMKAIKDHLQEAVHECIKAAGHEFEPVKQRSLVKAAAFGKSFLQDMRPQVFVDMCQM
IRVMNNVRDFKVGIPITYDQLQQLTVPVLIDRLVARRMYYLAIQICNYLRIPKRDGASRI
LAHWACYKVQQDNIDDNDIAKSIADKLGDTPGISYTEIASKALDRGRTALAIKLLDYEPR
AEDQVPLLMRMSRDELALQKAVDSGDTELVYMVTEHMRKNMTLGEFLMKIRKYPVALSLF
IKYCKQQDRRLLIDIYYQEDQFRNSGNAFIQDSFAEKALDSRIKLLSKAKESFDKGVFQF
GSQVTEEHIKLLEFQSRLQDQFGKQFLNLSVSDTLYQLIYQGYHRQAETLKKEFSIPDIR
YWWTKIQALGAARDWSELEKFAKSKKSPIGYEPFVEACWKFGNNRVEAEKYIIKVPLEKR
VRLFIKIGYFEQAADAAFQMKSVNDLNIVFSKCGNNRSVAEKINVYRTQLMQRR
NT seq
2505 nt
NT seq
+upstream
nt +downstream
nt
atgactgatgatacaccagcaactattgattggaatccacttggtgaagtgtactacagg
aagttggaagtgtattctatgttttgggcagatcgtattgatttaaatcaatatattgtt
tcagctggtgcatatggtggtccaatagctcttattaaagaaaacagcgcagaaggaggg
aatttaaattcacgggctgttattcatattttcacttcttctggacaagagcaagcagca
ttcaagtgggatggtggacgtcttgtaactatgggctggagcaactgtgaagaattaatc
tgtgttgctgaagatggtgcagtacatgtctttgatatgtttggtaattttctgcgacag
ttctctttgggcttagaaatacaacggtcgtttattcttgaggcaaaaatattctcaagt
acttatggaacagggatatgtgtgctgtcaggcgattaccaattctttgttgtaaataat
atcaacgatgttaaagttaaacctatgcaatgtccattcactgtggaagcacccccaagt
agctgggctgttcttagcttgccagatgatcaaggcacaaaggttctgatggctattgac
aatacaatatatgaattagactcctttcaaccaaaaacgaagaaccctccaattagccat
cctgtcaaagcttttattgaaatggctgtctcgtttaaccaaaaatatgttgctatgttt
gctgatactggattgttgtggattggatcatcaaacttacaggaagtttattgtcagtac
aatacgcatctacagttaagaccttcacagcttgtatggtgtggttctggtgcagtagtt
ggttactgggataattatttaatgatggtcggtccaacaaaggacatagtaaaatatttt
gttgatagtaaagttcacctatcccaagaattggatggtgtcaggattattggaaattat
caccaagaatttttgcaaaaagtacctgttgaagttgaagatgtttttaagcttggttca
atgaagcctggcgcaatgctgcatgacgcatcaagagaatatgagcgcaaaagtgcacgt
gtggacgattacatgaaagccattaaagaccatttacaggaagctgttcacgaatgcata
aaagcggctggtcatgaatttgaacctgtaaagcaaagaagtcttgtaaaggcagctgca
tttggtaaaagttttctgcaagatatgcgcccacaagtatttgtagatatgtgccaaatg
attcgcgtgatgaataatgttagagattttaaagttggaatcccaattacttatgatcaa
ttacagcaacttacagtacctgtactgatagacagattggtggcaagaaggatgtattat
ttagcaatccaaatttgcaattacttgcggataccaaaaagagatggtgccagcaggata
ttagctcattgggcatgttacaaggttcaacaagacaatattgatgataatgatattgca
aagagtatagctgataaacttggagacactcctggaatttcgtacacagagatagcatca
aaagcacttgacagaggaagaactgcactggcgattaagcttttggattatgaaccgaga
gcggaagatcaagtgccacttctaatgagaatgagtcgagatgagttggctctgcaaaaa
gctgtagatagtggcgacactgaacttgtgtacatggtgacagaacatatgcgtaaaaac
atgacgcttggggaattcttaatgaagatcagaaagtatcctgttgctctaagtttgttc
ataaagtattgtaaacagcaagacagacgtctgcttatagacatttactatcaagaagat
caatttcgcaacagtggaaatgcatttattcaagatagttttgctgaaaaagccttagat
tcgagaatcaaactgttaagtaaggccaaggaatcttttgataaaggcgtgtttcaattt
ggtagccaggttactgaagagcatataaagttgctcgagtttcaaagtcgtttacaagat
cagtttggtaagcagtttctcaacctttctgtgagcgacacattgtatcagctaatatat
caaggctatcaccgccaagctgagacattaaaaaaagagttttccatacctgatatacgc
tactggtggacaaagatacaagccttgggtgcagctagagattggtcagagctagaaaag
tttgcaaaaagtaagaaatcaccaataggctacgagccttttgttgaagcatgttggaag
tttggtaacaacagagtagaagcagagaagtatattattaaagttcctttagaaaaacgt
gtgaggttgttcataaaaattgggtacttcgaacaagctgctgacgctgcatttcagatg
aaaagtgtaaacgacttaaacatagtattttcaaaatgtggtaacaaccgatctgttgca
gaaaaaattaatgtatatcggacacagttaatgcagaggaggtaa
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