Hydractinia symbiolongicarpus: 130622585
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Entry
130622585 CDS
T09218
Name
(RefSeq) transcription termination factor 2-like
KO
K15173
transcription termination factor 2 [EC:5.6.2.-]
Organism
hsy
Hydractinia symbiolongicarpus
Brite
KEGG Orthology (KO) [BR:
hsy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hsy03021
]
130622585
Transcription machinery [BR:
hsy03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
130622585
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
Zn_ribbon_GRF
Motif
Other DBs
NCBI-GeneID:
130622585
NCBI-ProteinID:
XP_057294043
LinkDB
All DBs
Position
12:complement(17787663..17816599)
Genome browser
AA seq
1033 aa
AA seq
DB search
MAGVLSYTDVQRIPKCPNHDVGCIIKTGTKNNTTHGKSFYLCNNTKERCAFAEPASDIEA
TVCPVHQQMVELKAFATKQDGIRCYFRCMYGKELGSAWCGNELVKMVNKDGVVNPREKLK
DIKNYAHTLKEKQKKVFNAFEGQQKRVESHYFKDKTTVEQQIIESQQSKQLQGDHHSHSS
LQDSHVEESKVFHIPRDSCLSESAVEHTTKLSEENLADLDTSRSVFHIPRNARISDVSEN
SSMNSSASSNKSATFDSNPTDKKSSSNTIEIISSDEEDEVKSENTMEYHTSSNPAKNILH
GTIESIELEIKKQTNLLQKIGPHAPDGGQKIRSNIDLLNSKLREMKMHGHQKVLPQAPLK
IALPSMAAPVPHSVINIGYDHPGSLYNLAQNRSAPLFGGRMTETRLKEVGRITKGAIEQL
HKSLDTCPASAEEAEDPIGLCVTLMTHQRQAMAWLLWREKQIPSGGILADDMGLGKTLTM
ISLALKSKQDNTSKIQELGSDSTLQFSRCTVVICPASLVHQWHKEIEKRVKKLQLRVCLY
HGSNREKRVKRLAAHDIVLTTYNIVSIEGKPFVEKEKEKPKAGLSEWLDSTAPKKLEEGP
LFKIFWRRIILDEGHNIKNHKTATSIAICALEGESRWIVTGTPIQNQTMDLYSLVKFLRV
SPFDELKVWKREVDNKNASGTKRMNSIVNSILLRRTKDQTDSKTGKPIVSLPNRSSVLHK
LELSKDEMAVYEVLQKFSKNMFTQFLDTRHGGHSTTSQPRRSSSDEMPTTVLGMDIDKAL
SVFGLRGVNAVNAGCLLVLVLRLRQCCGHLSLMCDALDSELCKTEGIDLPLDEQFGNLSI
DADSPLFKESRPVQLQPTYKSTKISALLDCLREISKKPTEGKSVIVSQWTRMLDTIAYHL
KNEGFNFEFITGSVNAKKRSELVELFNTERNPQVMLVSLKAGGVGLNLIGGNNLFLLDQH
WNPALEEQACDRIYRVGQKKDVVIHRFLCVNTVEERIVQLQEKKKSIANSVLYGGKSQKL
TLDDLKTIFGLSR
NT seq
3102 nt
NT seq
+upstream
nt +downstream
nt
atggcgggagttttgagctacacagatgttcaaagaattcccaagtgcccaaaccatgat
gttggctgcatcattaaaactggaacaaagaacaatacaacacatgggaagtcattctac
ttgtgcaataacacaaaagaaagatgtgcttttgctgagcctgcaagcgatattgaagcc
actgtatgtcctgttcatcagcagatggtagaattaaaagcatttgcaacaaaacaggat
gggataaggtgctattttcgttgtatgtatggaaaagaattaggtagtgcttggtgtggt
aacgaattggttaaaatggttaacaaggatggtgtggtgaatcctagggagaaactgaaa
gacattaaaaattatgcacacactttaaaagagaaacagaaaaaggtttttaatgcattt
gaaggtcaacaaaaaagagtagaatcacattatttcaaggataaaacgactgtggagcaa
caaataatcgaaagtcaacaatcaaagcaattacaaggtgaccatcactcccacagttct
ttacaagacagtcatgtagaggaatctaaagtgtttcacataccgcgggatagttgttta
tcagaaagtgccgtagaacacactactaaactcagtgaagagaatttggctgaccttgat
acgtctcgctcagtttttcatattccaagaaatgcgcgtatcagtgacgtttcagaaaat
agctcaatgaattccagtgcatcatcaaataaaagtgcaacatttgattcaaatcctaca
gataaaaaatcaagttcaaacacaatagaaattataagtagtgatgaagaagatgaggta
aaatcagagaatacaatggaataccacacgtcaagtaatcctgcaaaaaacattctgcat
ggaacaattgagtcaattgagcttgaaatcaaaaaacaaactaatttgttacaaaagatt
ggtccacatgctcctgatggaggacaaaaaataagatccaatattgacttattgaattca
aaattaagggaaatgaaaatgcacggacatcaaaaagtattaccgcaagctccactgaag
attgccttgccatcaatggcagctccagtaccacattctgtgataaacattggatatgac
catccaggaagtctgtataatttagctcaaaaccgatcagccccactttttggtggccga
atgacagagaccagactaaaagaagtcggtaggattacaaaaggagcaattgaacagctg
cacaagtcacttgatacttgtcctgcttctgcagaggaagcagaagacccgattggcttg
tgtgtgacattaatgactcatcaaagacaagcaatggcttggttgctatggagagaaaaa
caaatcccctctggaggaatacttgctgacgatatgggacttggaaaaacattaaccatg
atctcacttgccttaaaaagcaaacaagacaatactagtaaaattcaagaactagggtcg
gattcaacattgcagttttcaagatgtactgtggtgatatgtccggcttcactggttcat
cagtggcacaaagaaatcgagaaaagagtgaaaaaactacaattgcgtgtttgtttatat
catggttctaacagagaaaaaagagtgaaaagattagcagctcatgacattgttctaact
acgtacaacatagttagtatagaaggcaaaccatttgttgaaaaggagaaggaaaaacca
aaggctggcttatcagaatggctagattccactgctccgaagaaactggaagaaggaccc
ctgtttaaaatattttggaggcgtataatattagatgaaggtcacaatattaaaaaccac
aaaactgctacctctatagctatctgtgctcttgaaggagagagtcgttggatagtaaca
ggaacccctatacaaaaccaaacgatggatttgtactcacttgtaaaatttcttcgagtc
tctccctttgacgaactaaaagtttggaagagagaggtggacaataagaacgcgagtgga
acgaaaagaatgaattctattgtcaacagcattttgttgcgccgtacaaaagaccaaact
gattcaaagacaggcaaacccatagtgtcgttaccgaaccgcagtagtgttttgcacaaa
ctagaattatcaaaagatgaaatggctgtttacgaagtcctccaaaaattctcgaagaac
atgttcacacaatttttggacactcgccatggcggtcactccacaacgtctcaaccgaga
agatcttctagtgatgaaatgccgaccactgttctgggaatggatattgacaaagctctg
tctgtgtttggcttaagaggtgtgaacgctgtaaatgctggatgtcttctagtgcttgtg
ttaagattgcggcagtgctgtggacacctcagtttaatgtgtgatgctttggatagtgaa
ttatgtaaaacagaaggtatcgatttaccattggatgaacagtttggaaatctttctatt
gatgcagatagtccattgtttaaagaaagtcgaccagttcaactgcagccaacttataag
agtaccaagatatcagcattactggattgtctcagagagataagtaaaaaaccaactgaa
ggaaaaagcgttattgtatcgcaatggactcgcatgctagacacaatagcgtatcatttg
aagaatgaaggatttaactttgagtttattactggaagtgtgaacgcgaaaaaacgatcg
gagttagtggagttgttcaatactgagagaaatccacaggttatgttagtgtctctaaaa
gctggtggtgttggcttgaatttgattggtggaaataatctatttttacttgatcagcat
tggaatcctgctttagaagaacaggcgtgtgataggatataccgagttggccagaaaaaa
gatgtcgttattcatagatttttgtgtgtgaacacagttgaggagaggattgtgcagttg
caagaaaaaaagaaatcgatcgccaacagtgttttatatggtggaaaatcacagaaactt
acccttgatgatctcaagacaatatttgggttatcgaggtaa
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