Hydractinia symbiolongicarpus: 130622608
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Entry
130622608 CDS
T09218
Name
(RefSeq) integrin alpha-V-like isoform X1
KO
K06487
integrin alpha V
Organism
hsy
Hydractinia symbiolongicarpus
Pathway
hsy04081
Hormone signaling
hsy04145
Phagosome
hsy04148
Efferocytosis
hsy04512
ECM-receptor interaction
hsy04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
hsy00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
130622608
04512 ECM-receptor interaction
130622608
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
130622608
04148 Efferocytosis
130622608
09142 Cell motility
04820 Cytoskeleton in muscle cells
130622608
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hsy04131
]
130622608
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hsy04147
]
130622608
04515 Cell adhesion molecules [BR:
hsy04515
]
130622608
04090 CD molecules [BR:
hsy04090
]
130622608
Membrane trafficking [BR:
hsy04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
130622608
Exosome [BR:
hsy04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
130622608
Exosomal proteins of epithelial cells
130622608
Cell adhesion molecules [BR:
hsy04515
]
Integrins
Integrin alpha subunits
130622608
CD molecules [BR:
hsy04090
]
Proteins
130622608
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_3
FG-GAP
Integrin_A_Ig_2
Integrin_A_Ig_1
FG-GAP_3
Collectrin
DUF997
ITGAX-like_Ig_3
PRIMA1
Motif
Other DBs
NCBI-GeneID:
130622608
NCBI-ProteinID:
XP_057294073
LinkDB
All DBs
Position
12:complement(24501267..24523546)
Genome browser
AA seq
1023 aa
AA seq
DB search
MAETNRLGLTILINLLFLTNIALTFNVDTAIPEYFSNNENGSFFGYSIAFNRYELGLMIG
APLSKEAPSGSGGALYRCGYNKRQDYGCAVVKNADVKEGAGDDRQHQWLGATVSSNNRIT
LACAPRFANRGTSGNDFFLLGKCVNILEKDSSYAWKPCAAHMDRFQEFGYCQAGFAAKIF
GGGDNKLLSGLPNIQLNTGRLAIAPQGGASASFTPKTYLNYSDYMGYAVTSGKFHKDKNT
VIVVGGSPRGNELGGKVIMYFTDNGSPVFSSVINDPSKQTGTYFGSALAAVAIDKVKVYA
DLVVGAPFFAGSTVNEGIVYVYKNNKQNSLELVQRLYGEKQQGAMFGYAIGSVGDLNQDN
YNDIAVGAPWGGENGKGVVYLYYGSANNEPFLLKQTLYASKLDNKLDGFGFSFADYHAYK
VPAVSANILNDVDNNNYPDLAVGSYRSNHVVLFKSRPVIDVLCDIKGLDGVKIDLYDLTD
MCTNPVDKKKYKCITSFDVCFTLTNSDKEEAVNYTVVIDSEKKAGRRGFIQLANGDKVSQ
LTGVLEKVKTVTCITPKYVIYLYNNTKDINKEMYVKVSWLLQPGKDCTSTLCPIANEMSN
LKRVVKIHYIKGCSGDGNNVCNTKLSIKLGKALEGGYETIQVGVTKVLNITATIKNKGEN
AFDNNLRIGYPKEVNPNKVVIKNFAGTPVWDPNINRAGGQAVVGVTLPSPIAPNEEYVVS
VEFGVARVSKGTERLTFEGWLKTESEEMEPADNNDTLTIPVALIANLTVTGNVVPEQIKW
DSAAKADKVGPEVVHTFYFQNLGPSTADTSDVVINFPLKYEGQIMFNIFKAQLEGSDKTK
SAGTCAYGKLNPLGLDVTTSQQGSGNVTAKKLRTRREVDSSIVQLGCGGSVECREIKCSL
GLLKKSDGVTLKITSNLVASTFQQKVKDSRIINVQAKFTSTAVDKPKNAAPDTVIIPFTA
LTPNLTKEEDTEFPYWIVIVCILAAILIIAIIVFIMYKKGFFKRKKMGEEEEEEGLRGNE
AED
NT seq
3072 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaacaaataggctgggtttgacgatacttataaatttactctttttaacaaat
atagcgttaactttcaatgttgatacggcaataccggagtactttagtaataacgagaat
ggatcattttttggttattctatcgcctttaatagatatgaattagggcttatgataggt
gctcctttgagtaaagaagcaccttctggaagtggcggagcattatatcgctgtggatat
aacaagaggcaggattatggttgtgcagttgtgaaaaatgcagatgtaaaagaaggtgca
ggggatgatagacagcaccagtggcttggagcaacagtttcttcaaataaccgaataaca
ttggcttgtgctccacgttttgcaaatagaggcactagtgggaatgatttttttttgcta
ggaaaatgcgtaaatattctagaaaaggacagcagttatgcttggaagccatgtgctgca
catatggatagatttcaggaattcggttactgccaagcagggtttgccgctaagattttt
ggaggaggggataataaattgctgtctggtcttcctaatatacagttaaatacaggacga
ttggctattgcaccacagggaggagcaagtgcaagttttacaccaaaaacatatttgaat
tattcagattatatgggttatgctgtgaccagtggaaagtttcacaaggataaaaataca
gtcattgtggttggtggaagtccacgtggaaatgaattgggtggaaaggtgattatgtac
ttcactgacaatggctcccctgttttctcaagtgtgattaatgacccttccaaacagacc
ggaacttactttggatctgctttggcagctgtggcaatagataaagtaaaagtatatgca
gatttagttgttggtgcacctttttttgccggctccactgtcaatgaaggaattgtttat
gtttataaaaataacaaacagaattctttggaactggttcaaagattgtatggtgaaaaa
caacaaggagccatgtttggatatgctattggtagtgttggagatctaaatcaggataac
tataatgatattgctgtgggcgcaccatggggtggagaaaatggtaaaggtgttgtttat
ttgtattatggtagtgcgaacaatgaaccttttttattaaaacagacgttatatgcaagt
aaattggataataaattagatgggtttggtttttcttttgctgactatcatgcgtataaa
gtgccagcagttagtgctaatattttgaacgatgttgacaataacaattacccggatctt
gctgttggttcatacagatctaatcacgttgttttgttcaagtcaagacctgttattgat
gtgttatgtgatatcaaaggtctagatggtgttaaaattgatttgtatgatcttacagat
atgtgcacaaatccagttgataaaaagaaatacaagtgcattacatcttttgatgtatgt
ttcacattgacgaacagtgataaagaagaagctgtaaattatactgtagtcattgactca
gagaaaaaggctggtcgaagaggtttcattcaacttgcaaatggtgataaagtcagtcaa
cttacgggtgtactggagaaagttaaaacagttacatgtattacaccgaaatatgtaatt
tatttatataataacactaaggatatcaataaggaaatgtatgttaaagtcagttggctg
ttacaaccaggaaaagactgtaccagcacgctatgtccaatagcaaacgagatgtctaat
ttaaagcgagtggtgaagattcactacataaaaggatgtagcggtgatggcaataatgtt
tgtaacaccaaattaagtattaagttagggaaagctcttgaaggaggctatgagactatt
caagttggtgtcacaaaagttctgaacatcactgcgactatcaaaaataaaggagagaat
gctttcgacaataacttaagaattggttatcccaaagaagttaaccctaacaaagttgtg
atcaaaaattttgctggtactcctgtgtgggatccaaatataaatagagcaggcggacag
gctgttgtcggggtcacactaccttctccaattgcaccgaatgaagagtatgtggtgtcc
gtagaattcggagttgccagagtctctaaaggaactgagcgtctcacatttgaaggatgg
cttaaaaccgaaagtgaagagatggaaccagctgataataatgatacattaaccatcccg
gttgccttaatagcaaatttaactgtaacaggaaatgtggtaccagaacaaatcaaatgg
gacagcgctgccaaagctgataaagttggtcccgaagtcgtgcatactttttattttcaa
aaccttggtccgagtactgctgacacatctgacgtagtaatcaatttccctttgaaatat
gaaggtcaaattatgtttaacatattcaaggcgcagctcgaagggagtgacaagacaaag
agtgctgggacttgcgcttacggaaaactaaacccgttgggcctggacgtaacaacatca
cagcaaggtagtggaaacgtaacagcgaagaaattgagaacgcgtcgagaagtcgacagc
agtatagtgcagctaggttgcggtggaagtgtagaatgtagagaaattaagtgttcacta
ggtttgttgaagaagtcagacggcgtcactctcaaaatcacttcgaatctagttgcaagc
acctttcaacagaaggtgaaagatagtcgaataatcaatgttcaagcgaaatttacatca
acagctgttgacaagccaaaaaatgctgccccagatactgtcattattccctttacagcg
ttaacaccaaatttaacaaaggaagaagacacggaatttccatattggattgtaattgtt
tgcatcttagctgccatcttgattattgctattatagtgtttatcatgtacaagaaaggg
ttcttcaaacgtaagaagatgggcgaagaagaagaagaagaaggattacgaggtaacgaa
gcggaagattaa
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