Hydractinia symbiolongicarpus: 130622676
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Entry
130622676 CDS
T09218
Name
(RefSeq) glycine receptor subunit alpha-2-like
KO
K05190
gamma-aminobutyric acid receptor subunit rho
Organism
hsy
Hydractinia symbiolongicarpus
Pathway
hsy04080
Neuroactive ligand-receptor interaction
hsy04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
hsy00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
130622676
04082 Neuroactive ligand signaling
130622676
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
hsy04040
]
130622676
Ion channels [BR:
hsy04040
]
Ligand-gated channels
GABA-A
130622676
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GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
130622676
NCBI-ProteinID:
XP_057294148
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All DBs
Position
12:17648469..17662062
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AA seq
468 aa
AA seq
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MLKQLLFTFLLLGGMHECVQALSVDDHDFEVAEQFRKLLVNYDKRMRPNYMGNITTVDVD
IAILSFGAISELKMTFLLDIFLRQKWIDYRLRHNMTNKIIPLLGRNTPPDFIWTPDTHFI
NAIKAIKHTVTVSNEKLDIYPDGTVFWGTRVTLVATCDMDFKTYPMDIQTCGIALESYAY
TEEHVRYRWFQKGLSIVSPEISQYTLVNFSKSAHLTKYLSSGVYSILEGTFVFQRRMAVS
LMQIFFPSTAIVCISFVSFWVHKNCVSARVGLGIIPLLTISTIWGSVNRSLPRVNYVKAI
DVYFIGSFCFIFCALLEYTVVQNLNFKAKKKKSLTIKRQSSFRGKEGRADSAPLFNDMFT
GSCRKPVPPQSVFKIKENVTKTELDNRGRYIAYTYTKEADKKKPSPPKLDRDKMPYYYKA
YRVQGKPTTLDVICRFFFPFSYFCFNMVFWVSYHMTHHTTSKLLDGPH
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgttgaaacaattattatttacgtttttactattgggcggaatgcatgagtgtgtacaa
gcgttgtccgttgatgatcacgatttcgaagtggctgaacagtttcgaaaattactggtt
aactatgacaaaagaatgcgaccaaattatatgggtaatatcacaactgtcgatgtggat
atagcaattttgagttttggtgcaataagcgagcttaaaatgacgttcttacttgatatt
tttcttcgtcaaaaatggatcgactatcggctgcgtcataacatgacaaacaaaatcatt
ccgctattagggcgaaacacaccaccggactttatttggactccggacacacatttcatc
aacgctataaaagcaataaagcatacagttactgtgagtaacgaaaaacttgatatatac
ccggatggaaccgtgttctggggaacaagagtgacgttagttgctacatgcgatatggat
ttcaaaacatacccgatggatattcaaacttgtggcattgcattggaaagctatgcatac
acagaagagcatgttcgatatcggtggttccagaaaggactgagcatagtgtcgccggag
atctcacaatacactcttgtgaatttcagtaaatcagcacacttaacgaaatatttatca
agtggtgtgtacagtatcttggaaggtaccttcgtatttcaaagacgcatggcagtctct
ctgatgcaaatcttcttcccttccaccgctattgtttgcatttctttcgtttcattttgg
gttcataagaactgtgtgtcagcgagggttggacttggtattataccacttcttactatt
agtaccatatggggatcagtcaatcgaagtttaccaagagtgaattacgttaaagctatt
gatgtttacttcatcggatcattctgttttatattttgcgcccttctagaatatactgtt
gtgcagaacttaaatttcaaggcgaaaaaaaagaaaagtctaacaataaaaagacaaagt
tcatttcgtggcaaagaaggtagagcagattcagcgccgttatttaatgacatgttcaca
ggcagctgcaggaaacctgttcctcctcaaagcgtgttcaaaattaaagaaaatgttact
aaaacagaattagataatcgaggcagatatattgcttacacttacacgaaagaagcagat
aagaaaaaaccatcaccgcctaaacttgatcgagacaagatgccatactattataaagca
taccgtgttcagggaaaaccaaccacacttgatgttatctgcagatttttctttcccttc
agctatttttgctttaacatggtgttttgggtatcatatcatatgactcatcacactaca
tcgaaacttttagacggacctcactaa
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