Hydractinia symbiolongicarpus: 130622731
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Entry
130622731 CDS
T09218
Name
(RefSeq) breast cancer type 1 susceptibility protein homolog isoform X1
Organism
hsy
Hydractinia symbiolongicarpus
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
zf-C3HC4
zf-C3HC4_4
zf-C3HC4_2
RING_XB3-XBAT31
zf-RING_2
zf-RING_UBOX
zf-C3HC4_3
RTT107_BRCT_5
zf-RING_5
PTCB-BRCT
zf-RING_6
BRCT_2
BRCT_3
zf-RING_10
zf-Nse
OB_2TM_halo
zf-rbx1
zf-C3HC4_IRF-2BP1_2
PhzC-PhzF
Motif
Other DBs
NCBI-GeneID:
130622731
NCBI-ProteinID:
XP_057294211
LinkDB
All DBs
Position
12:complement(10122696..10139640)
Genome browser
AA seq
1613 aa
AA seq
DB search
MDAPDNTVTEVRKLLQSLQKSFQCTICLDLLSQPISTKCNHQFCSQCIKELLVKSDKKRP
VTCPLCKNKITKRSINSNPQIAEIVTCVRDVCNAADDDCERIVFLGATPILSQRHKKTIY
RNKVRNKKVKSSLSFVSNNNSKSHSIFDLISDDDEGAPKTDNNKLSRKSDNNIIANLESI
DAVNNKPFEESTTVYKDVKDDQKGIILVNRKLSNHEEMLNKKNIEEYSLLDRIKKGHKNS
KSPELSNPQNLSGKRKSFELSSSTVLTNDAVQPKKRKKLSKKQAKQFKEDILDISPEIEF
ENSEKNFHKTKNGKQTKAKHKNHSLDDLRSSINVSASIEDVTTAKKVLTDMCSSDLITKS
VAVDSTDQTVPQSVSTDATVTPVLPDIFCQEKCESIETTNVTQNQESESILNDGIEDTTI
IEEPEVKETVNEDNPLLTDIVSLPQSKNAMEIDKWDKINDLPIHCAQKNSPNKINPEIVH
HSDIYVRKDETDENTKVNEHLNNNEIVSTPPNVNKSCHIQLSQISVNESPGSIFFPGSKK
SVVSTCRRKESQPLTPWKLSLGNTINETVDIKSFINNIESPNKDHSMFGNVSFSKVPLPV
KNGVMKPVKIMSAERISATEAVVSIKYKMTVEKLSCDLYTGMQKKLIAERLPQKESNSKV
LTGTIIKNEVLVSEDNQEKQIVQSNKQNDFEEENKNIESNKHLKNSKDCVDQNMLLSGKQ
FLLSSKGNSEELIPPTPPGTKVPTSFRKSMDNSLHCQDVVDKKQQTLSHIRDTTKADENV
ALMRNKDPTQELKVNTSDIAENHKLMDSKSVIQDVEPHVEIQYTGGSDQLLYDEAEKMDL
AKSNMCNNQVETLISKKANLTADVTDAFMCDIGDEIDVYTNEKKYVSGGDKSENEENLSE
SLVGSCTNASCIVDGNEKNENSVCQKEEERLDLDLFSENKKDFNLGKKFRENINQLKREK
QLSQNSVDFDVSEPDLIVVECTNSKKGERTRSDDGVKSQVNTGAVKEKIHMHSSDSEDEN
LTLKRKKRKKEAKIVSDEETSSGCEENPVSNLKHEKSKKLKRSSEDGRQPQEVDQLQSVT
LCDTDNDDNDDDHDEKVLPLCISTAKKMESGDSNNKILLNQKAAKRERRRLERDRIAEHL
KKYIDEIKQNDEAESSDDDILERTAFEVKEMLDGKKNKASVGEDKNFLFASEHLEQHEDL
EKTNDVLKENTSQKPSKENKKSISDTNLKLLKQRLLSPITNTDILRLPKEKKFSDWKSST
EDKTDEPSTIISSRMFNKELSPTTPSNLLPVPISQSTILKDMRKNDFKKPVNVKRKSSQD
KTSNISCVDATPKVTCGTPKKMSLPDEVRMYGERNRKNIFATENKYSTNPIKKQSPHTTT
TNMVDEKESVKHQKPVIMTSRLSKKQVNACTKVCQKLGAKIVQTYSESVTHLVVVADENN
AVAKMSYTYKYLMSLVAGLWIVDFKWIMDSFQNDLFVKEEKYEVKGDPAADHQDIPKLYR
RARSKNYCLFDGYRMCLVGKFEQSQIGRDQLLSLLRKSGAEIVYSLNELKCSSSQIQTMM
ITDGLNQLTSRDRELLQQYPLPVIHPEWIVESIINFSIQDTSIFDLSRQKEDR
NT seq
4842 nt
NT seq
+upstream
nt +downstream
nt
atggatgcacctgacaacactgttacagaagttagaaaattattacaaagtctacaaaag
agctttcaatgcacaatatgcttggatttgttatctcaaccaatatcaactaagtgcaat
catcaattttgcagtcaatgtataaaagaactgctggtgaaaagcgacaagaagaggccg
gttacttgtcctctttgcaagaataaaattacaaaaagaagcataaattctaatcctcaa
atagcagagatagtaacctgtgtcagagatgtctgcaatgctgctgatgatgattgtgaa
agaatagtatttttaggtgccacaccaattttatcacagcgtcataaaaagacgatatac
agaaacaaagttagaaacaagaaagtaaaaagcagtttatcatttgtctccaataacaac
agcaaatcacattccatatttgatttgatttctgatgatgatgaaggcgcgcctaaaaca
gacaataacaaattgtccagaaaatcagacaataatattattgccaatctggagtctatt
gatgctgtgaataataaaccttttgaggagagcaccacagtgtacaaagatgttaaagac
gatcaaaaaggaattattctagtaaatagaaagctgtcaaatcatgaggaaatgctgaac
aaaaaaaacattgaggaatatagtttgcttgatcgaattaaaaagggacataaaaattca
aaatctcctgagttatccaatcctcaaaatttgtcaggaaaacggaaatcttttgaatta
tcaagttctactgttttaactaatgatgctgtgcagccaaagaaacgtaaaaagttgtct
aaaaagcaagctaaacagttcaaagaggacatattggacatttctcctgagattgaattt
gaaaacagtgagaaaaattttcataaaactaaaaatggaaaacagactaaagcaaaacat
aagaaccacagtctggatgatttaagaagctcgataaatgtttctgcatctattgaagat
gttacaacagcaaagaaagtcctaactgacatgtgcagctctgacttgatcacaaaatct
gtggcagtagattctactgatcaaacagttccacaatctgtctctaccgatgcaactgtc
actccagttttacctgatattttttgtcaggaaaaatgtgaaagcattgaaacaacaaat
gttactcaaaaccaggaaagtgaatctatattaaatgatggtatagaagataccactata
atagaagaacctgaggtaaaagagactgtaaatgaagacaacccgttgttgacagatata
gtctcattaccacagagcaaaaatgccatggaaatcgacaaatgggacaaaataaatgat
ctaccaatacattgtgctcagaaaaattcaccaaataaaataaatcctgaaattgttcac
cattctgacatttatgttagaaaagatgaaactgatgaaaataccaaagtgaatgaacat
ttaaataataatgaaattgtaagtacaccgccaaacgtaaacaaatcgtgtcatatacaa
ctctcgcaaatttctgttaacgaatcccctggtagcattttctttcctggtagtaagaaa
tccgtagttagtacttgcagaaggaaagagagtcagccattgacaccatggaaattatca
ttaggtaataccataaatgagactgttgacatcaagtcatttatcaataatattgaaagt
cctaacaaagaccactccatgtttggtaacgtatccttttcaaaagttcctcttcctgtg
aaaaatggtgtaatgaagccagttaaaatcatgtctgctgaaagaatatctgcaacagag
gctgttgtatcaataaaatataaaatgactgttgaaaaattaagttgtgatttatacaca
ggaatgcagaagaaattgatcgcagagagattgcctcaaaaagaaagtaactcaaaggta
ttgactggtacgataatcaaaaacgaagttttagttagtgaagataatcaagaaaaacaa
attgttcaatcaaataaacaaaatgattttgaagaagagaataaaaacatagagagtaat
aaacacttaaagaactcaaaagactgtgtggaccaaaatatgttgttatcagggaagcag
tttttgttgtcatcaaaaggcaacagtgaagaattaattccacccacaccacctggaacg
aaagtaccaacatcattcagaaagagtatggataattctttacattgtcaagacgtagtg
gacaaaaagcagcagacactttctcatattcgtgacaccactaaggctgatgaaaatgtt
gcattgatgcgcaacaaagatcctacacaagaactaaaagtaaacacttctgatatcgct
gaaaatcataaactaatggatagcaaaagtgtaattcaagatgtagagccgcatgtagag
atacaatatacaggtggtagtgatcaattgctttatgatgaagctgaaaaaatggatctt
gcaaaatctaatatgtgtaataaccaggttgagactttaatatcaaaaaaagctaattta
actgctgatgtcactgatgcattcatgtgtgacataggagatgaaattgatgtgtataca
aatgaaaaaaaatatgtttcaggtggagataaaagtgaaaatgaagaaaacctgagtgaa
agtctagttggcagttgcacgaatgctagttgtattgtagacggcaatgaaaaaaatgaa
aatagtgtatgtcaaaaagaggaagaacgactcgatcttgatttattttccgagaataaa
aaagattttaaccttggcaagaagtttcgtgagaacattaaccaacttaaacgtgaaaaa
caattaagtcagaacagtgttgattttgatgtttcagagcctgatttgatagtagtcgaa
tgtacaaacagtaaaaaaggcgagagaacaaggagtgacgacggagttaaatcgcaagtt
aacactggtgcagttaaggagaagatacatatgcatagtagtgacagtgaagatgaaaat
ttaacactgaaaagaaagaaaagaaagaaggaggcgaaaattgtaagtgatgaagaaact
agtagtggttgtgaggagaatccagtaagcaatttgaaacacgagaagagtaagaaacta
aaaaggagtagtgaggatggtcgtcaaccacaggaggtagatcagttacagtctgttacc
ttgtgtgatacagataacgatgataatgatgatgatcatgatgagaaagttctaccactg
tgtatcagtacagcaaagaagatggaaagtggtgatagtaataataaaattttattgaat
cagaaagctgcaaaacgtgaacgtcgtcgtttggaaagggacagaattgctgagcactta
aaaaaatacattgatgaaataaagcaaaacgatgaggctgagagcagtgatgacgacatt
ttagagagaacagcttttgaagtaaaagaaatgcttgatggaaaaaaaaacaaagcatcg
gttggtgaagataagaacttcttatttgccagcgagcatctggaacaacatgaagatctc
gagaaaacaaatgatgtcttaaaagagaacacgagtcagaaaccttcaaaggaaaacaag
aaaagtatttcagataccaatttaaaacttttgaagcaacgtttactatcacccataact
aacacagatattttaagacttccaaaagaaaaaaagttctctgattggaaatcgtcaact
gaggataaaactgatgagccttctacaatcatttcttcaagaatgtttaataaagaactt
tctccaacaacaccatcaaatcttttaccggttccaatatcacaatcaacaattcttaag
gatatgaggaagaatgattttaaaaagccagtgaatgttaaacggaagtcctcacaagat
aaaacttctaatatctcctgtgtggatgcgacgcctaaagtcacatgtggtacaccaaaa
aaaatgtctctccctgatgaagtaagaatgtacggtgaaagaaatagaaaaaatatattt
gctacagaaaataaatattctacaaatccaatcaagaagcagtccccacacacaacaaca
acaaatatggttgatgagaaagaaagcgtgaaacatcagaaacctgttattatgacgtca
cggttgtctaagaaacaggtgaatgcgtgtacaaaagtttgtcaaaaacttggagctaaa
atcgttcaaacatattcagaaagtgtaactcatcttgttgttgtggcagacgaaaacaat
gcagtagccaaaatgtcgtatacatacaaatatcttatgagcttagtggctggcttatgg
attgtagattttaaatggataatggattcatttcaaaatgatttgtttgtgaaagaggag
aagtatgaagtaaaaggtgaccccgccgctgatcatcaagatattccgaaattatacagg
cgagctcgaagcaagaattactgtttatttgatggttatcgaatgtgtcttgtgggtaaa
tttgaacaaagtcaaattggaagagatcaacttttatcacttcttcgaaaatctggagca
gaaattgtatactctttaaatgaattgaagtgctcatcaagtcaaatccagacgatgatg
ataactgatggtttgaatcaactgacatcaagagacagagaacttcttcagcagtaccca
ttacctgttattcatccagaatggatcgtcgaatcaatcataaatttcagtattcaggat
accagtatcttcgatttaagtcgacaaaaagaagatcgctaa
DBGET
integrated database retrieval system
