Hydractinia symbiolongicarpus: 130622776
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Entry
130622776 CDS
T09218
Name
(RefSeq) sorting nexin-4-like isoform X1
KO
K17919
sorting nexin-4
Organism
hsy
Hydractinia symbiolongicarpus
Pathway
hsy04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
hsy00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
130622776
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hsy04131
]
130622776
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
hsy04990
]
130622776
Membrane trafficking [BR:
hsy04131
]
SNARE
SNARE associated proteins
Others
130622776
Protein recycling
Rab GTPases and associated proteins
Rab4 associated proteins
130622776
Autophagy
Cytoplasm to vacuolar targeting (CVT) pathway
Other Cvt associated proteins
130622776
Domain-containing proteins not elsewhere classified [BR:
hsy04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
130622776
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PX
Vps5
Arfaptin
FapA
Motif
Other DBs
NCBI-GeneID:
130622776
NCBI-ProteinID:
XP_057294267
LinkDB
All DBs
Position
12:complement(22183880..22198590)
Genome browser
AA seq
430 aa
AA seq
DB search
MANYRKGDHSDGKKLYFPEGALLNQMEVAVVESERRKSEILKEPFVVYLVESRPLENTIG
IEQGCALWRRYSEFELLRNYLMAIYPFIVMPPLPEKRPFYFQINVAKFQLAADKFDPDFI
ERRRQGLECFLLRLASHPVVSQDPIFRGFLNQEDSWKESVASTQWQQKADSRFKSISASM
SIKKPDERFDNIRSYSESLNTNISSLLKVQQRISHRQQLILKQHTEYGKLFSEWSAIEDE
LGDILQQAGHQMDTLSSQTETVLNEEEVAYIDQLKEYLYFTESLKAIVRKQHLRHYDLEK
AEEALSIKSKQKDELAKEITALENGEEVPQSGFTLKSVSNMLFGQDSLEAKQEKMLTLEE
QVRDAEQTMKMAENDVNVFVEKSLKDFDRFKKQKVRDVNEIMENYVKTQIKANRNGIQQW
QAMKEYFMSM
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atggcgaactaccgaaaaggtgatcattcggatggaaaaaagttatattttccagaaggt
gctctgttaaatcaaatggaggtcgctgttgttgaatcagaaagaaggaaaagtgaaatt
ctcaaggagccatttgttgtttaccttgtcgaatcgaggccattggaaaacactattggt
attgagcaagggtgtgcactatggagacgatacagtgagtttgaattgctgagaaattat
ttgatggcaatatatccatttattgtaatgccaccattaccagagaaacgaccattctat
tttcagatcaatgtagcaaaatttcagcttgctgctgacaaatttgatcccgattttata
gaacgcagaagacaaggtcttgagtgttttcttttgagacttgcttcacatcctgttgtt
tcacaagatccaatatttagaggtttcctgaatcaggaagacagctggaaagaaagtgta
gcatcaacacaatggcaacaaaaggctgatagtcgctttaaaagtatcagtgcttcaatg
agcataaaaaagccagatgagcggtttgacaacattagaagttatagtgaaagcttgaat
acaaatataagttcattactgaaagttcaacagagaatttcacacagacaacagttgata
ctgaaacaacacacagaatatggaaaactttttagtgaatggagtgcaattgaagacgaa
cttggtgatattttacaacaagctggccatcaaatggacacactgagtagtcaaacagag
actgttttaaatgaggaggaagttgcatacattgatcagttgaaagagtatttatatttc
actgaatcattgaaagcgattgttcgaaagcaacatctgagacactatgatttagaaaaa
gctgaagaggccttgtcaatcaaaagtaaacaaaaagatgaactagctaaagaaattact
gctctagagaatggtgaagaggtaccacaatctggcttcacattgaaatcagtatccaac
atgttatttggacaagactcgcttgaagcgaaacaggagaaaatgttgactttagaagag
caagtccgagatgcagagcaaacaatgaagatggcggaaaatgatgtcaatgtgtttgtg
gaaaaatcattaaaagattttgacaggtttaagaaacaaaaagttcgagatgtaaacgaa
ataatggaaaattatgtcaaaacacaaattaaagcaaatagaaacggtatacagcagtgg
caagctatgaaagaatatttcatgtcgatgtaa
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