Hydractinia symbiolongicarpus: 130622780
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Entry
130622780 CDS
T09218
Name
(RefSeq) tuftelin-interacting protein 11-like
KO
K13103
tuftelin-interacting protein 11
Organism
hsy
Hydractinia symbiolongicarpus
Brite
KEGG Orthology (KO) [BR:
hsy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hsy03041
]
130622780
Spliceosome [BR:
hsy03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
130622780
Other components
Complex C specific factors
130622780
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Paralog
GFIT
Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
Motif
Other DBs
NCBI-GeneID:
130622780
NCBI-ProteinID:
XP_057294272
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Position
12:11388622..11417264
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AA seq
811 aa
AA seq
DB search
MDSEEEVESFEITDHDLQSELNPGRRHMQTKAEAIYGIWATSDDEEEEGGGYQRGTRKKM
ANYTQPLGFVTGGLFHDKDGEQTGSGDSGDEVINTEDAKKFVSSQNKKNQTLKQDASKKN
FFDGARFKKNTKQFGAWEKYTTGFGSKMLEKMGYKGKGLGKTGEGIVEPVQAFKRGGRAA
IGAYGTEKPAGSDPVYDTDEEEEKEIKKEIEKLHQWKKTGQEVKKPKYVYKTAEEVKKSG
SAKKLAPLLSHSNVKIVDMTGPQTKVLQGYGSLGHQHAKPDEAEKHPGIIEDDKKAFDIP
ELVYNLNLLVDLAESEIINIDRQQRFENDNVVNMTHELVRLEKVCIEEENEINNLEHVCK
IIDRCKAGLQPDKDEALTLKGLIQCFQTLQENYYEEYKLYGLEKLVIPLGFPLLSRHFSA
WHPFINPTYGIDVVKLWKNVLEEDKQNTNFNSEEQRSMGPFERLIWEVWMPHLRTAISQW
IPKESEKLIEVMEAWVQLLPDWVTANILDQLILPKLQAAVEGWNPLTDPTPIHSWLHPWL
PLMRNRLEPLYGPIRQKLAAALNNWYPSDPSAKVILEPWLKVFTRGSVEAFLLRSIYPKL
EQCMIEFKINPHQQLLEPFHWVMAWKDIISVHHMVSILDKHFFPKWLQVLRSWLGNSPNY
DEITKWYLGWKSMFSEEFADNPTIKEHFNRGLTLMNQAVSGTLQPGARENVAYLTSTERR
REAEQAAMKAEKAQVSASVTGGVPTRFKDLVEQAAEDNGILFIPLPNRRHEGKTVYSFGK
CVICIDRDVVFYSSEGNWKPSSLQDLLRMAR
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
atggattcggaagaagaagtggagagttttgaaattaccgatcatgacctacaaagtgaa
ctaaatcctggaagaagacatatgcaaactaaagctgaagcaatttatggaatctgggca
acatcagacgatgaggaagaggaaggtggaggataccaaagaggtacaagaaaaaagatg
gcaaactatactcagccattgggttttgtaacaggtggactatttcatgacaaagacgga
gagcaaactgggagtggagattcaggtgacgaagtaatcaacacagaagatgccaagaaa
tttgtgtcaagtcaaaataagaaaaatcaaacattgaaacaagatgcttccaaaaaaaat
ttttttgatggtgccagatttaaaaagaacacaaaacaatttggagcatgggaaaaatac
accactggttttggaagtaaaatgttggaaaagatgggatacaaaggaaaaggtcttgga
aaaactggtgaaggtatagttgaacctgttcaagcatttaagcgaggaggaagagctgca
ataggtgcttatggtacagaaaagccagctggatctgatcctgtatatgacactgacgaa
gaggaagaaaaagaaattaaaaaagagatagaaaagcttcatcaatggaaaaaaacaggc
caggaagtaaagaaaccaaaatacgtatacaaaacagcagaagaagtgaagaaaagtggt
tcagccaagaagcttgctccactactttctcacagcaatgttaagatagttgacatgact
ggtcctcaaacaaaagttcttcaaggttatggttcattaggccatcaacatgcaaaacct
gatgaagcagagaaacatcctggtataatagaagatgataagaaagccttcgatattcct
gaacttgtttacaatttaaatttacttgttgacctagcagaatcagagattatcaatata
gatcgccaacagcgatttgaaaatgataatgttgtcaatatgacacacgagttggtaaga
cttgaaaaagtttgcattgaagaagaaaatgaaatcaataatttggaacatgtgtgcaaa
ataatagatcgctgcaaagctggtctccaaccggacaaagacgaagcgttgacactgaaa
ggattaatacagtgctttcaaactttacaagaaaattattatgaagagtacaagctttat
ggattggagaaacttgtaatcccgcttggatttcccttgctctctcgacatttttcagca
tggcatccattcattaatccaacatatggaattgatgtcgtgaaattgtggaagaatgta
ttggaagaggataaacagaatacaaacttcaattctgaagaacagagaagtatgggacct
ttcgaacggctgatctgggaagtttggatgcctcacttgagaactgcaatcagccagtgg
attccgaaagaatctgagaagttgattgaagttatggaggcctgggtacaacttttacct
gactgggtaactgcgaatattctagatcaacttattctgccgaaactacaggctgctgta
gaaggttggaatccactgacggatccaactcctattcattcatggcttcatccatggtta
cctctcatgcgtaaccgtcttgaaccactgtatggacctattcgtcagaagctagcagct
gctttaaacaactggtatccatctgatccttctgcaaaagttatactcgaaccatggtta
aaagtctttacaagaggaagtgtggaagcgttcttgttaaggagcatttatccaaagctt
gagcaatgtatgatcgagtttaaaatcaatcctcatcaacagttgttagaaccatttcac
tgggttatggcgtggaaagatatcatcagtgtacaccatatggttagcatactggataag
cactttttcccgaaatggctgcaggtattaaggtcctggcttggaaactctcccaactac
gacgagattacaaagtggtatctcggctggaagtcaatgttttcagaagaatttgcagac
aatccaactataaaagagcatttcaatcgaggtttaactctaatgaatcaagcagttagt
ggaactctccagcctggtgctcgtgagaatgtagcttacttgacgagtactgaaagaagg
cgagaggctgagcaggcagcaatgaaagcagagaaggcgcaagtttctgcatcagttact
ggtggagtgccgacaagattcaaagatttggttgaacaagcagctgaagacaacggcata
ttgttcattccgcttcccaatagacgtcacgaaggcaagactgtgtattcgttcggtaaa
tgtgtcatttgtattgacagagacgttgtgttttattcctctgagggaaattggaaaccg
tcgtctcttcaagacctgttacggatggctagatga
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