Hydractinia symbiolongicarpus: 130622903
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Entry
130622903 CDS
T09218
Name
(RefSeq) small nuclear ribonucleoprotein Sm D3-like
KO
K11088
small nuclear ribonucleoprotein D3
Organism
hsy
Hydractinia symbiolongicarpus
Pathway
hsy03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hsy00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
130622903
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsy03019
]
130622903
03041 Spliceosome [BR:
hsy03041
]
130622903
03032 DNA replication proteins [BR:
hsy03032
]
130622903
Messenger RNA biogenesis [BR:
hsy03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
130622903
Spliceosome [BR:
hsy03041
]
Complex A
U1 snRNP components
Sm proteins
130622903
U2 snRNP components
130622903
Complex B
U1 snRNP components
130622903
U4/U6.U5 tri-snRNP components
130622903
Complex C
U2 snRNP components
130622903
DNA replication proteins [BR:
hsy03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
130622903
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
130622903
NCBI-ProteinID:
XP_057294346
LinkDB
All DBs
Position
13:complement(21154079..21155403)
Genome browser
AA seq
129 aa
AA seq
DB search
MSASIGVPIKVLHEAEGHIITLETLTGEVYRGKLLEAEDNMNCQLTQITMTARDGRVSQL
EQIFIRGSKIRFVILPDMLKNAPMFKKMLTQKTGGVGRGKSALLKAQVAARGRGTDRGRG
GRGFFPRRR
NT seq
390 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcttctataggtgttccaattaaagtacttcatgaagcagaagggcacatcatt
acactggaaacactcacaggtgaagtatatcgaggcaaattgttagaagcagaggacaat
atgaactgtcaattgactcaaattacaatgacggctagagatggtcgagtttcacaatta
gaacagatatttattcgtggaagtaaaattcggtttgttatactaccagacatgttaaaa
aatgcacctatgtttaagaaaatgttgacacagaaaacaggtggtgttggacgtggaaaa
tctgctttattgaaagcacaagttgctgctagagggcgtggcaccgatagaggaagaggt
ggaagaggtttctttcccagaagacgttag
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