Hydractinia symbiolongicarpus: 130622908
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Entry
130622908 CDS
T09218
Name
(RefSeq) RNA-binding protein Musashi homolog 2-like
KO
K14411
RNA-binding protein Musashi
Organism
hsy
Hydractinia symbiolongicarpus
Pathway
hsy03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
hsy00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
130622908
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsy03019
]
130622908
Messenger RNA biogenesis [BR:
hsy03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
130622908
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
PHM7_cyt
Motif
Other DBs
NCBI-GeneID:
130622908
NCBI-ProteinID:
XP_057294350
LinkDB
All DBs
Position
13:21284969..21300146
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AA seq
387 aa
AA seq
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MDDDGQPGVDLNPMEPDPGKMFIGGLHSQTTADSLQRYFEQFGEVKECVVMRDAVTKRSR
GFGFVRFVDASTVELVQNASPHNVDGKKIDPKRAIPKRPPPGQNQFKKVFVGGLPPDINA
QELTEYFEAFGKVTEVLLMHDKNTKRLRGFGFITFESDASGKHVCETGFHKLKGKNVECK
RAQPKEAMMLQGKGRGFVVNLAPFPFGRGYPNGLGTSPVGYGFTDWTVNPQLYQQLANVM
QYSRGRGGFANNYASQGFLNMPDHRRSYTEYGNVQTAANAVLTQEPTSVTASNVVSADNI
HAEYDQHNVYSNVQLNQYGSQQNPVVTPASPLTQAFTQTTSPRLDVSYMNASSRTGIAPE
HLFHNGHTAASPQGPFGHGMSQIALRH
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atggacgatgatggacaacctggagtggatttaaatcccatggaaccagacccaggtaaa
atgttcatcggaggattgcacagccaaacaactgcagacagtttacaaagatatttcgaa
cagtttggagaagtcaaagagtgtgttgtaatgcgcgatgccgtaactaaacgatcaaga
ggtttcggctttgttagatttgtggatgcaagtacagtggagctggttcaaaatgcttcc
ccacataatgtagatggaaaaaagatcgaccctaaacgcgccattccgaaaagaccacct
cctggccaaaatcagtttaaaaaagtgtttgttggtggtttgcctccagatatcaatgca
caagagctgacagaatattttgaagctttcggcaaggttactgaagttttgttgatgcat
gataaaaatactaaaagattaagaggttttggtttcataacatttgaatcagatgcttct
ggaaagcatgtatgtgaaacaggatttcacaagctgaaaggcaaaaatgttgaatgtaaa
agagcccaaccaaaagaagcaatgatgctgcagggaaaaggacgtggtttcgtagtcaat
cttgctccgtttccatttggaaggggatatcccaatggattaggaactagtccagttgga
tatggatttacagattggactgtaaaccctcagctatatcaacaattagcaaatgttatg
caatatagtcgaggccgaggtggcttcgctaacaattacgcatcacaaggctttttaaac
atgcctgatcatagacgctcgtacacagaatatggtaacgtccaaacagcagctaacgct
gtcctaacgcaagagcctactagtgtgactgcatctaatgttgtttcagctgataacatt
catgcagaatatgatcagcacaatgtctacagtaacgttcagctaaatcagtatggttct
caacaaaacccagttgtcacacctgcgtcgcctttaacgcaagcattcacacaaaccact
tcaccgcgtcttgatgtcagttacatgaatgcgtcatctcgtacaggaattgcacctgaa
catttatttcacaatggtcacacagctgcgtcaccgcaggggccgtttggccatgggatg
tcgcagatagcattgcgacattga
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