Hydractinia symbiolongicarpus: 130623295
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Entry
130623295 CDS
T09218
Name
(RefSeq) serine/arginine-rich splicing factor 1A-like
KO
K12890
serine/arginine-rich splicing factor 1
Organism
hsy
Hydractinia symbiolongicarpus
Pathway
hsy03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hsy00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
130623295
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hsy03041
]
130623295
Spliceosome [BR:
hsy03041
]
Common components
Common spliceosomal components
SR proteins
130623295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Nup35_RRM_2
RRM_3
RRM_7
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
130623295
NCBI-ProteinID:
XP_057294745
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All DBs
Position
13:10520739..10530544
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AA seq
214 aa
AA seq
DB search
MDRMSRSNDNKCRVYVGNLPQDIRSRDVENLFSKYGKIIDVNVKDGHGGRGPSFAFLEFE
DPRDAEDAIRYRDGYDFEGSRLRVEYPQGKKDFGSGGSFRGGFSRGRGRGRGGGPPRRSD
YRVLVSGLPATGSWQDIKDHLREAGEVVYADVFRDGTGVVEFSRRDDMEWAVRNMDDSKF
KSHEGETGIIRVKQDGSSSRRRKSYSRSRSRSPR
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atggacagaatgagcagatcaaatgataacaagtgtcgtgtttacgtgggaaacctccca
caagacattagaagtagagatgttgaaaatcttttctccaagtatggaaaaattattgat
gtaaacgtgaaggatggccatggaggaaggggaccttcatttgcatttttggaatttgaa
gatcccagagatgcagaagatgccatcagatacagggatggttatgattttgaaggtagt
cgactgagagttgaatacccacaaggaaaaaaagattttggttctggtggttcatttcgt
ggtggtttttcaagaggaagaggaagaggacgtggaggaggaccacccagaagatctgat
taccgcgtgttggtttcaggactgccagccactggaagctggcaggacataaaagatcat
cttcgagaagcaggcgaggtggtatatgcagatgtcttccgtgatggcacaggtgtggtg
gaattttcacgccgtgatgacatggaatgggctgttagaaatatggatgattcaaagttt
aaatcacacgaaggtgagacaggtattatacgagtgaagcaggacggttcctcaagcagg
cgaagaaaaagttactcgcgttcacgatctcgatctcccagatga
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