Hydractinia symbiolongicarpus: 130623354
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Entry
130623354 CDS
T09218
Name
(RefSeq) clathrin heavy chain 1-like
KO
K04646
clathrin heavy chain
Organism
hsy
Hydractinia symbiolongicarpus
Pathway
hsy04142
Lysosome
hsy04144
Endocytosis
hsy05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
hsy00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
130623354
04142 Lysosome
130623354
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
130623354
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hsy04131
]
130623354
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hsy04147
]
130623354
Membrane trafficking [BR:
hsy04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
130623354
Exosome [BR:
hsy04147
]
Exosomal proteins
Proteins found in most exosomes
130623354
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
TPR_COPA_B
TPR_PEP5_VPS11
TPR_1
TPR_Vps41
Fez1
TPR_2
Motif
Other DBs
NCBI-GeneID:
130623354
NCBI-ProteinID:
XP_057294808
LinkDB
All DBs
Position
13:6812157..6826140
Genome browser
AA seq
1693 aa
AA seq
DB search
MAQLLPIRFQEHLQLQNVGINAANIGFSTLTMESDKFICVREKVGEQAQVVIVDMADPNN
PTRRPISADSAIMNPASKVIALKAAKTLQIFNIEMKSKMKAHNLTEDVIFWKWISVNTIG
LVTELAVYHWSMEGDSSPIKMFDRHQSLAGCQIINYKVDHSGQWLLLVGISAQQNRVVGA
MQLYSVERKVSQPIEGHAAVFSQFKLSGNAQPSNIFCFAVRGAAASKLHIIEVGTPPTGN
QPFPKKAENIFFPPEADKDFPVAMQASQKYGVLYLVTKYGYIHLYDVESAQCIYSNRISG
DTIFVTAAYEPTEGIIGVNRKGQVLSVSVDEDKMVPFLIQVKQNGELARRLAERCNLPGA
DNLFVQAFNEKFAAGQYPEAAKIAAKAPKGILRTPQTIQRFQQLPSQPGQTSPLLQYFGI
LLDQGQLNKYESVELCRPVLMQSRKQLMEKWLKEDKLDCSEELGDLAKQFDNTLALSVYL
RANVPNKVILCFAETGQFQKIVLYAKKVGFEPDYVSLLRNVMRSNPDSGVQFAGMLIQDD
EPLADLSQLVDVFMEFNFVPQCTSFLLDALKNNRPAEGPLQTRLLEMNLLSAPQVADAIL
GNQMVTHYDRAHIAQLCEQAGLLQRALEHYSDIYDIKRAIVHTHMLNAEWLVNYFGTLSV
EDSVECIKAMLEHNIRQNLQICVQIASKYHEQLTTTALIEIFESFKSFEGLFYFLGSIVN
FSQEADVHFKYIQAACKTGQMKEVERICRESNCYDPERVKNFLKEAKLTDQLPLIIVCDR
FEFVHDLVLYLYKNNLQKYIEIYVQKVNPSRLPIVAGGLLDVDCGEDVIKSLILSVKGQF
STDELVAEAEKRNRLKLLLPWLESRIHEGSEEPATHNALAKIYIDANNNPERFLRENTFY
DSQVVGKYCEKRDPHLACIAYERGQCDIELINVCNENSLFKSLARYLVRRRNPELWAGVL
EEDNKYRRQLIDQVVQTALSETQDPEDVSVTVKAFMTADLPNELIELLEKIVLENSVFSD
HRNLQNLLILTAIKADRTRVMEYITRLDNYDAPDIASIAIGSELYEEAFAIFKKFDVNTS
AIQVLIENIQNLDRAYEFAERCNDPAVWSILGKAQLDQGMVKEAIDSYTKADDPSAYMEV
VETSKKSGNFEELVKFLQMARKKAKETFIDTELIFAFAHTGRLAELEEFISSPNHANIVQ
VGERCYDEKMYEAAKILFNNISNFARLASTLVLLGEYQAAVDSARKANSTRTWKEVCFSC
VDGEEFRLAQMCGLNIVVHADELEDLIRYYESRGYFEELITLMEAALGLERAHMGMFTEL
SILYSKYKPSKMKEHLELFWSRVNIPKVLRACEQAHLWSELVFLYDKYEEFDNAVVTMMK
YPTVAWKEGLFKEVITKVANIELYYKAIQFYLDTKPLLINDLLVVLTPRMDHTRAVNFFQ
KSGHLSLVKQYLRSVQNHNNKAINEALNSLLIDEEDYNGLRASIDAFDNFDNIALAQQLE
KHELIEFRRISGYLYKGNNRWKQSVELCKKDHLYKDAMQFACESRDAAVAEDLLQWFLEI
NKTECFAATLFMCYDLLKPDVVLELAWRHNLIDFAMPYMIQVMREYLTKVDKLAESNAKR
DEEKESTPEPPIMGVETLMIAAGPAYPPQPNMYGMPPGMAPGMPPQGMPPQGMPGMAPPQ
PGFPQQGGFYGQM
NT seq
5082 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagcttttaccaattaggtttcaagagcatcttcagcttcaaaatgttggaatc
aatgctgctaacattggtttttcaacactcaccatggaatcagacaaatttatttgtgtg
cgagaaaaagttggagaacaggcacaagttgttattgtggacatggctgacccaaacaat
ccaacacgtcgtcccatttcagcagactctgccatcatgaatccagcatctaaagtaatt
gcacttaaagctgccaagaccctgcagatttttaacattgaaatgaaaagtaaaatgaag
gctcacaacctaacagaagatgtcattttctggaagtggatatcagttaacaccatcggc
cttgtaacagagttggctgtgtatcactggtcaatggaaggggattcaagtcctattaaa
atgtttgatcgtcaccaatccttggctgggtgtcaaattattaattacaaggttgatcat
tctggacagtggctgttgttagtaggtatttctgctcaacagaatcgtgttgttggagct
atgcagctgtattcagttgaaagaaaagttagccaaccaatagaaggacatgctgctgtt
ttttctcagttcaaattaagtggaaatgcgcaaccatctaacatattttgttttgctgtg
agaggagcagctgcatcaaagttacatattattgaagtaggaacaccacccacaggaaac
caaccctttccaaaaaaggctgaaaatattttctttccaccagaggctgacaaagatttc
cctgttgctatgcaagcaagtcaaaagtatggtgttttgtatttggttacgaagtatggc
tacatacatttatatgatgtagaaagtgctcagtgcatctattctaacagaattagtggt
gatacaatatttgttactgcagcttacgagcctactgaggggataattggtgtgaacaga
aaaggacaggttctatctgttagtgtggatgaggataaaatggttccattcttgatccaa
gtcaaacaaaatggagagctagcaagacgacttgctgaacgatgcaacttacctggtgca
gacaatctatttgtgcaagcatttaatgaaaaatttgctgctgggcaatatccagaggct
gcaaaaattgctgcaaaagcacccaagggaatattacgaacacctcaaacaattcaaaga
ttccaacaattaccttcccaaccaggacaaacatcacctttgcttcaatattttggaata
ttacttgatcaaggccaacttaacaagtatgaatcagtagaactttgtcgtccagtgctt
atgcaaagtcgtaaacaactaatggagaaatggctgaaggaagataagcttgattgcagt
gaagaacttggagatcttgctaagcaatttgacaacacactggcattgtctgtttacctg
agggcaaatgtaccaaacaaggttatcctttgctttgctgaaaccggccaatttcaaaag
atcgttttatacgccaagaaggttggttttgaaccagactatgtgtctttgttgcgcaat
gttatgagatcaaatccagactctggtgttcagtttgctggtatgttgatccaagatgat
gaacctttggctgatttgagtcagcttgtagatgttttcatggagttcaattttgttcct
caatgcacatcatttttgttggacgcattaaaaaacaacagacctgctgagggtccactt
caaactagactattagagatgaacctgctttcagctcctcaggttgcagatgctattctt
ggtaatcagatggtgacgcattatgatcgtgctcacatcgcgcagttatgtgagcaggct
ggtttgttacaaagagctcttgaacattacagcgatatctacgacatcaaacgagctatt
gtacacacacacatgcttaatgcagagtggcttgtcaactattttggcactttgtcagta
gaagattctgttgaatgcatcaaagccatgctggagcacaatatccgtcaaaatttacaa
atctgtgtccaaattgcctcgaaataccatgagcagctgacaactactgctttgattgaa
atttttgaatcttttaaaagttttgagggattgttttattttctgggatctattgtcaac
ttttcccaagaagcagatgtacatttcaaatacattcaggctgcttgcaaaactggacaa
atgaaggaggttgaaagaatttgcagagaaagcaattgttatgatcctgaacgtgtgaag
aacttcttaaaggaagccaagcttactgatcagttaccattgatcattgtgtgtgaccga
tttgaatttgttcatgatttggttttgtacctatataaaaacaatctgcaaaaatatata
gagatctatgttcaaaaggtcaacccatctcgattgcccattgttgcaggaggattattg
gatgttgattgtggtgaagatgtcatcaaaagtttgatattatcagtaaaaggacagttt
tctactgatgagttagtcgctgaagcagagaagagaaaccgattgaaacttttattacct
tggttagaatctagaattcacgaaggctctgaagaacctgctacacataacgcattagct
aaaatttacatagatgcaaacaacaatccagaaagattcttaagagaaaacacattctat
gacagtcaggtggttggaaaatattgtgaaaaacgtgatcctcacttggcatgtatagcg
tatgaaagaggacaatgcgatatagaattaattaatgtatgtaatgaaaactcactgttc
aagagtctggctcgttacttagtgcgaagaagaaatccggaattatgggcaggtgtgtta
gaagaagacaacaaatacagaagacaactgatcgatcaggttgttcaaacagctttgtct
gagactcaagacccagaagatgtatcagttacagtgaaagccttcatgactgctgatcta
ccaaacgaacttatcgaactcttagaaaagattgttttagaaaattcagtgttcagtgat
cataggaacttgcagaatttattgatactaactgcaataaaggctgacagaacacgagtt
atggagtatatcacacgcttagacaactatgatgcaccagatattgcaagtatcgcaatc
ggaagtgaattgtacgaagaagcctttgccattttcaagaagtttgacgttaacacatca
gctattcaagtcttgattgaaaatattcaaaatctcgacagagcttatgaatttgcagaa
cgctgcaatgatcctgcagtttggagtatactaggaaaggctcagttagatcagggtatg
gttaaagaagctattgattcctacactaaagctgatgacccatctgcgtacatggaagtg
gttgaaacatcaaagaaatcagggaactttgaagagcttgttaaattcttacagatggct
cgtaagaaggccaaagaaacatttatcgatacggagttgatttttgccttcgctcatact
ggacgacttgcagagttagaagaattcatctccagtcctaatcacgccaacatcgttcaa
gtcggcgagcgctgttacgatgagaagatgtacgaagctgccaaaattttgtttaacaat
atatctaacttcgctcgacttgcatctactttggtattgttaggagaatatcaagctgct
gtggatagcgcacgcaaagcaaacagtacaagaacgtggaaagaggtctgtttctcctgt
gttgatggagaagaattccgtctcgcgcaaatgtgtggtttaaacatagttgtgcacgca
gacgagctagaagacttgataagatattatgaaagtcgtggatacttcgaggagctgatc
actttgatggaagctgcattaggattggaacgtgctcatatggggatgttcactgaattg
tctattctctactcaaaatacaagccttcgaaaatgaaggaacacttggaactattctgg
tcaagagttaatatcccaaaggttctcagagcatgcgagcaagctcatttatggtccgaa
ctagtatttttatacgataaatatgaagaattcgacaacgccgttgtaacaatgatgaaa
tatccaactgttgcatggaaggagggtttattcaaagaagttatcaccaaagtagccaac
atagaactatattacaaagctatccaattttatttagacaccaagccattattaataaat
gatttattagtcgttcttacgccgcgtatggatcacacacgagcggtgaatttctttcaa
aaatccggtcatttgtctctagttaagcaatatttacgttctgttcaaaaccacaataac
aaagctatcaatgaagctttgaactcactgctcatcgacgaagaagactacaatggcctc
cgtgcttcgattgatgcgttcgataactttgataacatcgctttagctcaacaacttgaa
aaacacgaattgatcgaattcagaagaatcagtggttacttgtacaaaggaaataatcgc
tggaaacaatctgttgaattatgtaagaaagatcatttgtacaaggatgcaatgcaattc
gcttgcgaatcacgcgacgctgcagttgcagaagatcttcttcagtggttcttagaaatc
aacaaaaccgaatgttttgctgctactttattcatgtgttacgatttactaaaacctgac
gtggtgttggagttagcttggagacacaacttaatcgactttgcaatgccgtatatgatt
caagtcatgagggaatacttaactaaagtcgacaaattagctgaatctaatgcaaaacgt
gacgaagagaaggaatctacacctgaacctccaatcatgggagtggaaacgctgatgatc
gccgctggaccagcttatccgccacagccaaatatgtacggtatgccacccggtatggct
ccaggaatgccgccccagggcatgcctccgcaaggaatgcctggaatggctccaccacaa
cctggttttcctcagcaaggtggattctatggtcaaatgtaa
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integrated database retrieval system
