Hydractinia symbiolongicarpus: 130623500
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Entry
130623500 CDS
T09218
Name
(RefSeq) replication factor C subunit 5-like
KO
K10756
replication factor C subunit 3/5
Organism
hsy
Hydractinia symbiolongicarpus
Pathway
hsy03030
DNA replication
hsy03410
Base excision repair
hsy03420
Nucleotide excision repair
hsy03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hsy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
130623500
03410 Base excision repair
130623500
03420 Nucleotide excision repair
130623500
03430 Mismatch repair
130623500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hsy03032
]
130623500
03036 Chromosome and associated proteins [BR:
hsy03036
]
130623500
03400 DNA repair and recombination proteins [BR:
hsy03400
]
130623500
DNA replication proteins [BR:
hsy03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
130623500
DNA Replication Termination Factors
ELG1-RFC complex
130623500
Chromosome and associated proteins [BR:
hsy03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
130623500
DNA repair and recombination proteins [BR:
hsy03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
130623500
Check point factors
HRAD17(Rad24)-RFC complex
130623500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
AAA_22
AAA_11
RuvB_N
AAA_14
AAA_24
ResIII
AAA_30
AAA_assoc_2
DEAD
AAA_16
RCF1-5-like_lid
DUF815
AAA_19
AAA_7
AAA_5
PhoH
AAA_3
TIP49
bpMoxR
AAA_28
DNAX_ATPase_lid
AAA_2
nSTAND3
Mg_chelatase
ATPase_2
IstB_IS21
Thioredoxin_6
RNA_helicase
NPHP3_N
BrkDBD
Motif
Other DBs
NCBI-GeneID:
130623500
NCBI-ProteinID:
XP_057294972
LinkDB
All DBs
Position
13:complement(7652991..7664918)
Genome browser
AA seq
337 aa
AA seq
DB search
MLKGDTKMPISEIDRRLPWVEKYRPKCLEDLISHKDIITTIQRFISEDKLPHLLFYGPPG
TGKTSTILAVAKQLYAAKEFQSMVLELNASDDRGIGIVREQILGFASTRTIFKSKFKLVI
LDEADAMTNDAQNALRRIMEKYTENTRFCLICNYLTGIIPAIQSRCTRFRFGPLDTEQMS
SRLTHVINTENVSITEDGKKALLRLAKGDMRRSLNILQSTHIGYGNVTEETVYTCTGNPL
RQEIQNIVDWMLNESFATAYKKITELKTRKGLALQDILSEVHLLVHRIDFPPNVRITLLS
KMAEIEYNLSAGTSEKIQMSGLIAAFQCVRDTVAAEA
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atgttaaaaggagacacaaaaatgccaatttcagaaatagacagaagactgccatgggtg
gagaaatacagaccaaaatgtttggaagatttaatttctcacaaagacataataaccaca
atacaacggtttatctctgaagataaacttccgcatcttttattttatggaccacctggt
actggcaaaacatcaacaatactagcagttgctaagcaactatatgcagcaaaagaattt
caatccatggtgctagagctaaatgcatcagatgaccgtggcataggaattgttcgagag
cagattttgggatttgcaagtaccagaacaatattcaagtcaaagttcaaacttgtcatt
cttgatgaagctgatgcaatgacaaatgatgctcaaaatgctctcagaagaattatggaa
aaatacacagagaatacaagattctgtttgatttgcaattatttgactggaattatacct
gctatacagtcgcgttgcacacgatttcgatttggaccattagacacggagcaaatgtca
tcaagattaacacatgtcatcaacacagaaaatgtttctataacagaagatggaaagaaa
gctttgcttagactcgcgaaaggtgacatgagacgatctttaaatatattacagagtacg
cacatcggttacggtaatgttacggaagaaaccgtttacacatgtactggtaatcctttg
cgacaggaaattcaaaatattgtcgactggatgcttaatgagagttttgcgaccgcttat
aaaaaaatcacagaacttaagacgagaaaaggtcttgcattacaagatattttgtctgaa
gttcatttgcttgttcacagaattgatttcccacccaatgtgcgtataacattattaagc
aagatggcggaaattgaatataatttgtcggctggtacgtcagaaaagattcaaatgagt
ggcttgatagctgcttttcaatgcgtacgagacacggttgctgctgaagcatag
DBGET
integrated database retrieval system
