Hydractinia symbiolongicarpus: 130624097
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Entry
130624097 CDS
T09218
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1-like
KO
K11648
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
hsy
Hydractinia symbiolongicarpus
Pathway
hsy03082
ATP-dependent chromatin remodeling
hsy03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
hsy00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
130624097
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
130624097
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
hsy01009
]
130624097
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hsy03021
]
130624097
03036 Chromosome and associated proteins [BR:
hsy03036
]
130624097
Protein phosphatases and associated proteins [BR:
hsy01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
130624097
Transcription machinery [BR:
hsy03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
130624097
SWI/SNF complex
130624097
Chromosome and associated proteins [BR:
hsy03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
130624097
PBAF complex
130624097
SWI/SNF complex
130624097
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF5
INI1_DNA-bd
TdIF1_2nd
DHHW
CRC_subunit
Motif
Other DBs
NCBI-GeneID:
130624097
NCBI-ProteinID:
XP_057295648
LinkDB
All DBs
Position
13:20107103..20117933
Genome browser
AA seq
372 aa
AA seq
DB search
MPLQTYGEKPKSFLLSDNSDELYMIGSEAGSYLRMMRGSIYKRYPYLWKRMATSEERKKM
TKYAIHQLPAHVMIVKAQEIEDLIDGKDAKFKSENALSKESPQSSGSKTRQRGKQDVWQP
SIPNSSHHLDAVPAGTPISRHRVGSKRVKTFPTCYDDHDMAAIHEAAKEPEELIPIRLDI
EIDGQKLRDTFTWNKNEKLISPESFAEVLCDDLDLPTLTFVPAIVQAMLQQIKQNSIESE
ISLSEMTDQRIIIKLNLHVGNVSLQDQFEWDMSEPLNDPEQFALSLCTELGLGGEFVTAI
AYSIRGQLNWNRKTYAFSEKQLPTLDMALRTGMDIDKWCPYLETLTDAEMEKKLRDQDRN
TRRMRRLANTYI
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgcccttgcaaacgtacggagagaagccaaagtcttttctgttaagtgataacagtgac
gaattgtacatgattggcagcgaagcaggtagttatctacgaatgatgcgtggttccatt
tacaaacggtacccatatttatggaaacgcatggctacgtcagaggaacgaaagaaaatg
acaaaatatgcaatccatcaactacccgctcatgttatgattgtgaaggcacaagaaatt
gaggatttaattgatggtaaagatgcaaaatttaaaagtgaaaatgctctaagtaaagaa
tccccacagtcttcaggaagtaaaactcgtcaaagaggaaagcaagatgtgtggcagcca
agtataccaaatagttctcatcacttggatgctgtaccagctggcactcctataagtcgt
catcgtgttgggtcaaaacgtgttaaaacatttccaacatgttacgatgatcatgacatg
gccgcaatacatgaagctgcaaaagaaccagaagaattaatcccaataaggcttgatatc
gagatagatggtcaaaaacttcgtgatacttttacttggaacaagaacgagaaacttata
agccccgaatcatttgcagaagttctttgcgacgacctagatctcccaacactgactttc
gtaccagctattgtacaagccatgctgcagcaaatcaaacaaaacagtatagagtcggaa
atatctttatcagagatgaccgatcagagaataattatcaagcttaatttgcacgttgga
aatgtatcactgcaagatcaatttgaatgggacatgtcagaacctttaaacgatccggag
cagtttgctttatctctttgtaccgaactcggcttgggaggtgaattcgttactgccatc
gcatatagtatacgtggccaactaaactggaatagaaaaacgtatgcttttagcgaaaaa
cagttacccactctggacatggccttacgtactggaatggatatcgacaagtggtgtcca
tacctcgaaactttaacagatgctgaaatggagaaaaaacttagagatcaagatcgtaat
acgaggaggatgcgtcgacttgcaaatacgtatatctag
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integrated database retrieval system
