Hydractinia symbiolongicarpus: 130624142
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Entry
130624142 CDS
T09218
Name
(RefSeq) protein strawberry notch homolog 1-like
KO
K26273
protein strawberry notch
Organism
hsy
Hydractinia symbiolongicarpus
Brite
KEGG Orthology (KO) [BR:
hsy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hsy03036
]
130624142
Chromosome and associated proteins [BR:
hsy03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
130624142
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
SBNO
ResIII
Zot
TPR_TRIP12_N
Motif
Other DBs
NCBI-GeneID:
130624142
NCBI-ProteinID:
XP_057295690
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All DBs
Position
13:14846142..14861733
Genome browser
AA seq
1456 aa
AA seq
DB search
MDDILSAALGQSGLNLSFLEEQHESVGKTSTNSQVTSKHNIVINAGNPVQNEETGENEDV
TDLLNLLDDPVNPVTTSKLTPGSSNGSDMLNFLLNYNSDEEVNTPTTVPSPSLERLLENT
SDFRGLSTQFPKIKPQVAKPKKVNPPNLGGKNIMCTSPKISLHTPQRINKSISVISRSNQ
IIINKISSNKTSRSNSPVTRLTTPSGVDLTKNVNSTFQKDEITDLERKKQSIEHVLASPN
LTLREREFIMKTALSHNVKPTLPPNNSSRGLSSLLNMSLNQKIENNEEEDDEDEENGMIR
SETFAEYMPAKVKVGYLHPDPVVETSSMASVAPPDVWYSLQLPLDIINERKLSALQLESV
VYASQQHEKLLPSGKRAGFLIGDGAGVGKGRTVAGVIFENYLRGRKRAIWLSVSNDLRFD
AIRDLRDIGCHAKVHALNKFKYDDKITSKANGKFKKGCIFSTYSALIGETSGKARFKSRL
DQLLHWCGKDFDGVIILDECHKAKNLMPVGSSKPTKTGLTVLMLQDQLPKARVVYCSATG
ASEPKNMAYMNRLGLWGQGTAFRDFAGFLQSVEKRGVGAMEMVAMDMKLRGMYIARQLSF
AGVTFDIKEVKLCSSFIEMYDASVKLWLDARTKFEEAANLVGLDGKGRKTMWGQFWSAHQ
RFFKYLCIAAKVGKAVIIAKEAIETGKCVIFGLQSTGEARTLDQIDELGGELNDFISTTK
GVFSTLVEKHFPTTETVNNCYNTEVDERKRKRDWRKPLRKSSKRRKVVNGDVEFMTSDSS
SESENEIESANDSNKDTVDSTQSEKDSDAESESEEKDPFADTSSGSDDEDAWLRAADNKK
AKKEEKISKLKLKRVGTSVDSSMNALAAAGFNLGRQYSWTNTSLSGMASTENMKSNRSDK
VVAPQGLSQQISNLKRSQSMKFETKSQQCRQMKQSLLDQLEIIAPYLPPNTLDELIDELG
GPEYVAEMTGRKGRVVAKSDGSFAYEPRSKDDVPLEVLNVEEKKRFMRGEKLVAVISEAA
SSGISLQADRREQNQRRRVHITLELPWSADKAIQQFGRSHRSNQVSAPEYLFLISELAGE
QRFASIVAKRLESLGALTHGDRRATESRDLSRYNFDTKYGRQALDVVFKSVIGHEKPLVN
PEPPTYKGVFMEDVKKSLIGIGLVQKDERTGVYSIADKDYTNISRFLNRILGLTVALQNA
LFSYFTETLAAVIKEAKRSGRWDEGIVDLGSQGESVVQSEVKTFLCPSTCGQVTTELRTV
SVERGLSFSKAVDMARQCQDPNEGFYLSSQLRNGKKTAVLILRQGSAKKTNSYTYSVYRP
NIGLVQKAETIKEIRKKYEKASASDVELNWNEQYDYSESNCSHAFWRGYCKRKLVGLSCE
VGARKKTCHILCGSVLSVWSKVETILSCQPGPHSKMQIIRSKLDNGLKLVGLLIPSNCID
ALVRVLTADDTIEQQF
NT seq
4371 nt
NT seq
+upstream
nt +downstream
nt
atggatgatatactatctgctgcgttaggtcagagcgggctaaacctttcatttttggag
gaacaacatgaatcagttggtaaaacctcaacgaattcgcaggtaactagtaaacacaac
attgtaataaatgcaggaaatcctgtccaaaatgaagaaactggtgaaaacgaagacgtc
actgatttattaaatcttcttgatgacccagtcaaccctgtgacaacatcaaaactaact
cctggtagcagcaatggtagtgatatgttaaattttttattaaactacaactctgacgag
gaggtaaataccccgacaacagttccgtcaccatcacttgaaagactgttagaaaatact
tcagacttcagaggattgtcaacgcaatttccaaaaataaaacctcaggttgctaaacca
aaaaaagttaatccaccaaacttgggaggtaaaaatatcatgtgcacttcaccaaagatt
tccctgcatacacctcaaagaattaataaaagtatatcagttatatctagatctaaccaa
attataataaataaaatcagtagtaacaaaactagtagatccaactcaccagtaacaaga
ttaacaacacctagtggtgttgatctgactaaaaatgtgaactcaacttttcaaaaagac
gaaattactgacttagaaagaaaaaaacagtcaatagaacacgtactagcttctccaaat
ttgacattacgggaaagggaatttatcatgaagactgcattatctcataatgtcaaacct
acacttccacccaacaattcttccaggggattgtcgtcattgttgaacatgtccctgaat
caaaagatagagaataatgaggaggaagatgatgaagatgaagaaaatgggatgatccgc
tctgaaacttttgcagagtacatgccagctaaagtaaaagttggataccttcatcctgat
cctgttgttgaaaccagctctatggcaagcgttgctccgccagatgtttggtatagtttg
caacttccactggatataattaacgaaagaaagttatctgctttgcaactcgaatctgta
gtttatgcatcacagcagcatgagaaattgttgcctagtggcaaacgtgctggctttctg
ataggtgatggagctggtgtcggaaaaggcagaacagtagcaggagtcatatttgaaaat
tatttgcgtgggcgtaaaagagctatctggttgagtgtatccaacgacttgagatttgat
gccattcgtgatttaagagatattggttgtcatgcaaaagttcatgctttaaataagttc
aagtatgatgataaaataacttcaaaggcaaatggcaagtttaagaagggctgcatcttt
tccacatattcagccttaattggcgaaaccagtggtaaagcccgatttaaaagtcgtttg
gaccaactcctacattggtgtggaaaagactttgatggagttataatattagatgaatgt
cataaagcaaaaaatctgatgcctgttggttcttcaaaaccgacaaaaactggattaact
gttctaatgctacaagaccagttgccaaaagctcgcgtggtatattgttctgctacaggc
gcttctgagcccaaaaatatggcatacatgaacagacttggcctatggggtcaaggaacc
gccttccgtgactttgcaggttttctccagtctgttgaaaaacgtggtgttggtgcaatg
gagatggtagcaatggacatgaagcttcgtggcatgtatattgctcgccaactgagtttt
gctggtgtcacattcgatattaaagaagttaaattgtgttcatcgtttattgagatgtat
gatgcatctgtaaagctatggcttgatgctcgaaccaaatttgaagaggcagctaattta
gttgggttggatggaaagggaagaaagactatgtggggacaattttggtcagcccatcag
cgtttcttcaaatatctgtgcatagcagctaaagttggaaaagctgtgatcattgctaaa
gaggcaattgaaacaggaaagtgtgtaatctttggtttgcaatccactggtgaagctaga
actctagatcaaattgatgaattagggggtgaattaaacgactttatttccacgacaaaa
ggggtgtttagcactttggttgaaaagcactttccaacaactgaaactgttaacaattgt
tacaatacagaagttgatgaaagaaagagaaaacgtgattggcgcaaaccattaagaaaa
tcatccaaacgaaggaaagtggtgaatggagatgttgaattcatgacatctgatagctct
agtgagagtgaaaatgaaattgaaagtgcgaatgattcgaataaagataccgttgattca
acacaatcagagaaagacagtgatgctgaaagcgaaagtgaagaaaaggatccctttgct
gatacttcttctggatctgatgacgaagatgcttggctgcgggcagctgacaacaaaaaa
gcgaaaaaagaagaaaaaatcagtaaactgaagctaaaaagggtgggaacgtctgttgat
tcaagcatgaacgcacttgccgcagctggattcaatcttggtagacaatattcatggacg
aatacatcactatccggcatggcatccacagagaacatgaagagcaatcgatcagataaa
gttgttgctccgcagggtttgtctcagcaaatttccaatttgaaacgttcccaatcgatg
aagtttgaaaccaagtcgcagcagtgtcgacaaatgaaacaaagccttttggatcagttg
gaaatcattgcaccgtatttaccgccaaacactttagatgaactaatcgatgaattaggc
ggacctgaatacgttgctgagatgactggcagaaaaggccgtgtcgtcgccaaaagcgac
ggttcttttgcctatgaaccaagaagcaaagatgacgttccgttagaagttttaaatgtt
gaggagaagaaaagatttatgagaggggaaaaacttgttgcagtgatatctgaggctgca
agttctggcatatctttgcaagcagatcgcagggaacaaaatcaaagacgaagggtacac
ataactctggaactaccatggagtgcggacaaagccattcaacaattcggtcgaagccac
agatcaaatcaagtatctgcgccggaatatttgtttctcatatcagaattggctggtgag
caaagatttgcgtctattgttgcgaaaagattagagagtctgggagccttgacgcatggt
gaccgaagagcaacagagtcacgtgatctcagccgttataacttcgatacgaaatatgga
cgtcaagcactagatgttgtttttaagtctgttattggccatgaaaaacctttggtgaat
ccggaaccacctacgtataaaggcgtcttcatggaagatgtcaaaaaaagtttgattggc
attggactagtgcagaaagatgaaaggacaggtgtttattcaatagctgacaaagattac
acgaatatctcccgatttctaaacagaatattaggtttgaccgtagctcttcaaaatgct
ttgttttcgtactttactgaaacgttggctgctgtaattaaagaagcaaaacggtctgga
agatgggacgaagggattgtagatcttggctctcagggagaatctgtggtgcagagtgaa
gttaaaacattcctgtgtccatccacttgtggtcaagtaacgacagaactgagaacggta
agcgtcgaacgcggactttctttcagcaaggctgttgatatggccagacaatgccaggat
ccaaatgagggtttttatctttcttcacagcttcgcaatggaaaaaagaccgcagttctg
atattgagacaaggttctgcgaagaaaactaattcctacacttactcagtgtatcggccg
aacatcggtctagtgcaaaaagctgaaacgataaaagaaatccgaaagaaatatgagaag
gcatcggcaagtgatgttgaactaaattggaacgaacagtacgactattctgaaagcaac
tgttctcacgcgttttggcgtggatattgcaaaagaaaactcgttggcctttcctgtgag
gtcggtgctcgcaagaaaacctgtcatattttgtgcggttcagttttgagcgtgtggtcg
aaggtggaaaccatcctgtcttgtcagccaggaccgcactcaaaaatgcaaatcattcga
tccaaacttgacaacggcctaaagttagtaggcttgcttataccaagtaattgtatcgat
gctttggtgcgagttttaactgccgacgatacaatcgaacaacaattctag
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integrated database retrieval system
