Hydractinia symbiolongicarpus: 130624230
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Entry
130624230 CDS
T09218
Name
(RefSeq) ubiquitin-protein ligase E3B-like isoform X1
KO
K10588
ubiquitin-protein ligase E3 B [EC:
2.3.2.26
]
Organism
hsy
Hydractinia symbiolongicarpus
Pathway
hsy04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
hsy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
130624230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hsy04121
]
130624230
Enzymes [BR:
hsy01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
130624230
Ubiquitin system [BR:
hsy04121
]
Ubiquitin ligases (E3)
HECT type E3
130624230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
IQ
Motif
Other DBs
NCBI-GeneID:
130624230
NCBI-ProteinID:
XP_057295784
LinkDB
All DBs
Position
13:13899709..13926269
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AA seq
1063 aa
AA seq
DB search
MYEMFGTSSSKKSQLLQAAQNERQLRLQQKQQEKAVIKIQAYVRMFINKRRFHHNIRNEF
DACFEQKQTNITQPALNVFLQARKLLLVYNSTQDEQRFLLLCKTIVTSLDTGKEPKYWYM
SVMLIKEWTSAWLKHIKQLLVICSNQLKTARTHISSGSKSASIYLSMLVTFTDCTHWKIL
KIKGGENIRPVMQQVCSSVTMELTAKGLIISLQEFLMNGLNRSSICLNTLSLSAVTALII
RIMNTSTMNSTSGIMILILKVLTVPAYIRHVNSLSPDATKLLVDFDAYTKVLDALHNYEN
LSKVYSSLDAHVCLCLIGNLLSLCSINIQKFHSTKDKLKIILSGLLNHCKTFVGGKHSGN
SKWHPVFGWCKDLNKSRSNESYIHVVSQLKCLWKQPLVGTFFENLPNVNELTTTQDNETK
GSILRRAFMKTFKKISSGVVDLNEPIVIDICMTCDLYQTLTATLSQLKLEIVASLSLQEE
VLVRLWRFIYSIGPGAGMKSILNFINENSQTLPKPLSSLLILFCECSAQLIPILDDIELY
ETQKPYTCDDLVQMSAFLNSLVFRLIWNEPDPSMPKEVEKDYTVRNSALELLLLLYDRDC
RRQFTPPNHWLIKEIKVSQFQTELKEKKPRALTIFGFIPHVIPHMERVKIFHRLVSADKR
SLGIDKDSRASALVSIKRSRLLEDGYEQLSRCSGSQLKGIVRVKFINDQGLDEAGIDQDG
VFKEFLEDVISHAFDPQLNLFKLTTGGDEQRLYPSPTSFIHENHLLLFEFVGKMLAKALY
EGILVDVPFASFFLNNLLQRQHSILYSSIDELPSLDPEMYKNLNFIKSYEGDVSDLALVF
AFDEDVLGQLVTHDLKPGGRAIQVNNSNRLTYIHLMARYRIHIQIKEQSSAFKCGFHSII
SPEWLSVFSGPELQRLISGSAETLDLSDLRNNTQYYGGYHAGHQTISWLWDILNNDFSLA
EKKLFLKFVTSCSNPPLLGFKHLEPQFSIRFVDCSEDEDVGDSVGSVVRGLFNVRKRNSS
SVARLPTASTCFNLLKLPSYKKKTILRDKLKYAIKSESGFELS
NT seq
3192 nt
NT seq
+upstream
nt +downstream
nt
atgtacgagatgtttggtacatcatccagtaaaaaatcacaattgcttcaagcagctcaa
aatgaacggcaattacgcttacaacaaaaacagcaagaaaaagcagtgataaaaattcag
gcatatgtacgtatgtttataaacaaaagaagatttcatcacaacattaggaatgagttc
gatgcttgttttgaacaaaagcagacaaacatcactcagccagctttaaatgtatttctc
caagcaagaaaattgttacttgtgtacaactcaactcaggatgaacagcgttttctgttg
ctatgcaagaccatcgttacaagtcttgacaccggcaaagagcctaaatactggtatatg
tcagtgatgttaataaaagaatggaccagtgcttggttgaaacatattaagcagttgttg
gttatttgttccaatcaactgaaaacggcaaggactcatatatcatctggtagcaaatct
gcgagtatttatttaagcatgttggtgacattcacagattgtacacattggaaaatatta
aaaataaaaggaggagaaaatattcgacctgtcatgcagcaagtctgctcatctgttaca
atggaattaactgcaaaagggttaattatctcattacaggaatttctcatgaatggttta
aacagatcttcaatatgtcttaatacgttgtccctatctgctgttactgctttaatcatc
agaattatgaacacgtccacgatgaacagtacgtctggtataatgatcctgatactgaaa
gtacttactgttcctgcatatatacgtcatgttaatagtctctctcctgatgcaaccaaa
cttttagttgattttgatgcttatactaaagtattggacgcgcttcacaattacgaaaac
ctttccaaagtgtattcttcacttgatgctcatgtttgtttatgtctcataggaaatctt
cttagtttgtgctctatcaatatacagaaatttcattcaactaaggataaacttaagata
attcttagtggccttctaaatcattgtaagacatttgttggtggaaagcattctggaaat
tcaaaatggcatccagtttttggttggtgcaaagatttaaataagtcaaggtccaatgaa
agttatattcatgttgtgtcacaattaaaatgtttgtggaagcaacctttggttggtaca
tttttcgaaaatttaccaaatgtaaatgaattgacaacaactcaggacaatgaaactaaa
ggaagcattcttcgtagagcgtttatgaaaacatttaagaaaatatcctctggtgttgtt
gatcttaacgaaccaatagttattgacatctgcatgacatgtgatttgtatcaaacatta
acagcaactttgtcacaattaaaattggaaattgttgcaagtttaagcctacaagaagaa
gtgttggtgcgattgtggcgcttcatatattcaattggacctggtgctggaatgaaaagc
attttaaacttcatcaatgaaaacagccagacgttacctaaacctttgtcatctttgttg
atcctgttttgtgaatgctcagcccagttaatacctatcctggacgatattgagttgtat
gaaacacaaaaaccatacacatgtgatgacttggtacagatgtcggctttcttaaattcg
ctcgtcttcagattaatatggaacgaaccagatccatcaatgccaaaggaagttgaaaag
gattatacagttcgtaactccgcattagaattgctactgttgttgtatgatcgcgattgt
cggagacagtttacaccgcctaatcattggctaatcaaagaaataaaagtgtcccaattt
caaactgaattaaaagagaagaagccaagagctcttacaatatttggtttcattcctcac
gtcattccacacatggaaagagtaaagatatttcatcgtcttgtgagtgctgacaaaagg
tcacttggtatcgataaagattcacgagcctcggcgctagtttccatcaaaagatctcgc
ttactcgaggatgggtatgagcagttgagtcgatgctcaggcagccaattgaaaggtatc
gttagagtgaagtttataaatgaccagggtcttgatgaagctggcattgatcaagatgga
gtttttaaagaatttcttgaagatgtcatctcacatgcttttgacccacagttgaattta
ttcaagttgacaacaggtggtgatgagcagagattgtatccttcccctacctctttcatc
cacgagaatcatttgttattgtttgaatttgttggaaagatgttggcaaaagctctttat
gagggtattttagtcgatgtaccgttcgcttcgttttttcttaacaatttattgcaacgc
cagcattctattctgtacagttccatcgacgagctgccatctttagatcctgaaatgtat
aaaaatttaaattttatcaagagctatgaaggcgatgtttcagatttagcgttggtgttt
gctttcgatgaagacgtacttggtcaactggttacacatgacctgaaacctggtggccga
gccattcaagtcaacaactcaaacagattgacctatattcatctgatggcgcgatatcgt
attcacattcaaattaaagaacaaagttcggcatttaaatgtggttttcattcaattatc
tcaccagaatggctgtcggtattttcaggaccagaacttcagcgtcttatatcagggtct
gcggaaacgttggatctatctgatttaagaaacaatactcaatattatggaggttaccat
gctggccatcaaactatatcgtggctttgggacatattgaacaatgactttagtttggct
gagaaaaagcttttcttaaagttcgtaacgagttgctcgaatccaccgctgttgggattc
aaacatttagagccacaattttcgatacgcttcgtggactgctccgaggatgaggatgtt
ggcgattcagtgggcagtgttgttcgtggtctgtttaacgttcgtaaacgcaattcatcg
tcagtagctcgtttgccaaccgcctcaacgtgttttaacttgttaaaacttcctagttac
aaaaagaaaactattttgagggacaaattaaagtatgctatcaaatccgagtctgggttt
gagctttcgtaa
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