Hydractinia symbiolongicarpus: 130624241
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Entry
130624241 CDS
T09218
Name
(RefSeq) probable ATP-dependent RNA helicase DDX52
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
hsy
Hydractinia symbiolongicarpus
Brite
KEGG Orthology (KO) [BR:
hsy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hsy03009
]
130624241
Enzymes [BR:
hsy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
130624241
Ribosome biogenesis [BR:
hsy03009
]
Eukaryotic type
90S particles
Helicases
130624241
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
DUF8065
HEM4
Motif
Other DBs
NCBI-GeneID:
130624241
NCBI-ProteinID:
XP_057295797
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All DBs
Position
13:complement(20934241..20947963)
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AA seq
591 aa
AA seq
DB search
MVDTHDLFKKLGCGAKFDLKRFKDDADKFQIINKYKKADITSDAAEVLDFFGSKTNHTTT
HHADGKKTENKEDTIEIETLGKKKKKIKKIILNDEEGQDESDIQLLRGAKKKKKISEIKE
KKLNKDQLKEKHMEKINLFRKEHKIYIHGSDISDPIKCFKDLRKRYEVSSVILRNITTNN
YTTPTPIQMQATPLMLQNRELLACAPTGSGKTLAFIIPLLCHLKEPRKVGFRAVVISPTR
ELSQQIYREFVRMNEGIGFRIHTLSKAKASSNNFGPNSSNKLDILIATPNRLVHLLKQDP
PGINLSNVEWLVLDEGDKLFEEGDTGFREQVAMIYQACDNPSIKHALFSATLANQVEEWC
KLHLDNVVRVTVGARNSATDTVNQELMFVGQESGKLLAMRQIIQKGFQPPVLVFVQSKDR
AKELFNELIYDGLNVDVIHADRTQAQRENVVKCFRTGKIWILIATELMGRGIDFKGVNMV
VNYDFPPTAVSYIHRIGRTGRAGRKGKAITMFTEDDVVNLRSIANVVRSSGCDVPAWMLQ
VKKPDRRTKKKLEKAPLKRAHINTISKYDQQHTNKRKQMIEMSKAKKSKNT
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atggtagacacacatgatttatttaaaaaacttggttgtggtgcgaaatttgatttaaag
cgatttaaagatgatgctgacaaatttcagattatcaacaaatacaagaaagcagatatc
actagtgatgcagcagaggtattggatttctttggcagcaaaaccaatcacacaacaaca
catcatgcagatggtaaaaaaacagaaaataaagaagacacaattgaaattgaaacactg
ggtaaaaagaaaaagaaaattaaaaaaattattttaaatgatgaggaagggcaagatgaa
agtgatatacaattattgcgtggagctaaaaagaaaaagaagatctccgaaataaaagaa
aagaaactaaacaaagatcaactcaaagaaaaacacatggagaaaatcaatctgtttcgc
aaagagcataaaatatatattcatggctctgacatttctgatcctataaaatgttttaag
gatttgcggaaaagatatgaagtttcaagcgtaattttaagaaatattactactaataac
tacacaacaccaacaccgatacaaatgcaagctacacccctaatgctgcagaatcgtgag
cttttagcttgtgcaccaactggaagtggtaaaacgctagctttcataattccactgtta
tgtcacttaaaggaaccaagaaaagttggatttcgtgcagtagttatttcacctaccaga
gaactgtcacagcagatatacagagaatttgtacgcatgaatgaagggatcgggttcagg
atacacacgttatcgaaggctaaagcatcatcaaataactttggtcccaattcgtccaat
aaattagatattttaatagcaactccaaacagacttgttcatcttttaaaacaagatcca
cctggcataaatctaagcaatgtggaatggttagttctcgacgaaggtgataaattattt
gaagaaggtgatacaggattcagagaacaggtcgctatgatatatcaagcttgtgacaat
ccatccattaaacatgcgctgttcagcgctacattagccaatcaggtggaagaatggtgc
aaacttcatcttgataacgttgtcagggtaacagtcggtgcaagaaactcagccacagac
acagtgaatcaggaactaatgtttgttggtcaagaatctggaaaactgcttgccatgaga
caaataattcaaaagggatttcaaccgcctgttcttgtcttcgtgcagagcaaagaccga
gctaaagaactttttaatgaactgatatacgatggtttaaatgtcgacgtcatacatgca
gatcgaacacaagcacagcgagaaaatgttgtgaagtgtttccgaactggcaagatctgg
attttgattgcaacagaactaatggggcgcggtattgactttaaaggagtgaacatggtt
gtgaattatgactttccacccactgctgtcagctatatacatagaataggtcgaacaggt
cgagcaggaagaaaagggaaagctatcacaatgtttactgaagacgatgtagttaatctc
agaagcattgcaaatgttgtgaggtcgtctgggtgtgatgtgccagcatggatgctacaa
gtaaaaaaaccggacagacgaacgaagaagaaactggagaaagcgccgttaaaacgtgcc
cacatcaatacaatatccaaatatgaccaacaacacactaacaaaagaaaacaaatgatt
gaaatgtcgaaagcaaagaaaagtaaaaacacgtga
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