Hydractinia symbiolongicarpus: 130624330
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Entry
130624330 CDS
T09218
Name
(RefSeq) F-box/WD repeat-containing protein 8-like
KO
K10264
F-box and WD-40 domain protein 8
Organism
hsy
Hydractinia symbiolongicarpus
Pathway
hsy04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
hsy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
130624330
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hsy04121
]
130624330
Ubiquitin system [BR:
hsy04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
130624330
Cul7 complex
Target recognizing subunit
130624330
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
F-box-like
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_SCAP
Beta-prop_EML
Beta-prop_EML_2
WDR55
WD40_Prp19
F-box
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
EIF3I
BBS2_Mid
Beta-prop_IFT140_1st
ANAPC4_WD40
WD40_2
Beta-prop_Nup120_160
Motif
Other DBs
NCBI-GeneID:
130624330
NCBI-ProteinID:
XP_057295900
LinkDB
All DBs
Position
13:11435656..11450364
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AA seq
691 aa
AA seq
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MDNTNLQKFRAEWVAEIVTKKKDPNSIGDSTADVKVGNVTDSDIHAASSNCSELQSRSYP
NVLADVKVDNVTDSDIHVASSNCSELQGRSYPNAFEIANKYLRDVNPECCMCVKQKKKIQ
KEKQSNEKHNMCKCCNNTSKRLKLDVNTKFHEDATVNEYNEKSENLIDLLIADIDEITCI
PFFDLELPKEIAVRIFQYLSLADLASCCLVNSKWKLIAEDDLIWLYWCDALGVREDTDCV
AGRSGWKIYIKEKLLERRRIRSKWKERYCEVRDLENETGGILCSAAIYDATLISAYINGS
VKLWDLSSGSYGQNLKEKYSRDEDIVTSSCTCVAMNNDICVAGFQNGDLMVWQRNADGRL
SAQLIFMRHFEVDVIRSVHVSEVSSKYNMLVCVVSISNFFVLRPDENKSLQEWTWETLLN
EQLGDRIVSFLLIDSSVDTPKLAVTIHNQLRVYTLLHGAFIVFDTLIGASFSNIDHKSES
LVAGINSFGYNILGGFRIRKYSLSSGKQVSNIIGPHTRITSLNYADCHNDEVVIGCSDHK
IRIYDLKTEKLLFVINAIDSEITTLQMDEWKVVSGHKDGNVCLWDRSNDALCWQTTLKHP
VQLCRFNENFLTIVNIPTDKFPQNSNWFADDLIQHRRYRGSIRVMDFTKDTFNFTVPHEC
RAEYNNITGYDYNIQLIAPYDDVAALNLPKL
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atggataatactaacttacaaaagtttcgagcagaatgggtagcagaaattgttacgaaa
aagaaagaccccaattcaattggtgatagtacagctgatgtcaaagttggcaatgttact
gattcagacatacatgcagccagtagcaattgtagtgaattgcaaagtagatcgtatcca
aacgtgttagctgatgtcaaagttgataatgttactgattcagacatacatgtagccagt
agcaattgtagtgaattgcaaggtagatcgtatccaaacgcgtttgaaattgcaaataaa
tatttaagagatgttaatccagaatgttgtatgtgtgtgaaacaaaaaaagaagattcaa
aaagaaaagcaatccaatgaaaagcataatatgtgcaaatgttgtaataatacctcgaaa
agattgaaattagatgtgaacacgaaattccatgaagatgcaacagtaaatgaatacaat
gaaaaaagcgaaaacttgatcgatttgttaattgcagatattgatgaaataacttgcatt
cctttctttgatcttgaattgccaaaagaaattgctgttcggatattccaatatttgtct
ttggcagatttagctagttgttgtttagtgaactccaaatggaaattaattgctgaagat
gacttgatatggttgtattggtgcgatgcattgggcgtgcgtgaggatacagattgtgtt
gcagggcgtagcggatggaaaatatatataaaagagaagttgttagaaagaagaagaata
cgcagcaaatggaaagaaagatattgcgaggtacgagacttggaaaatgaaacaggtgga
attctatgctcagcagccatatatgacgccacattgatatctgcttacattaatggatct
gtaaaactttgggacctctcatcaggaagttatggtcaaaatttgaaggaaaaatacagc
agagatgaggatattgtaacgtcctcgtgtacatgtgtagccatgaataatgacatttgt
gttgctggatttcaaaatggtgatctgatggtgtggcaacgaaatgctgatggtcgttta
tcggctcaattgatatttatgcgccattttgaagttgacgtcatacgtagcgtgcacgtg
agtgaagtcagcagtaaatacaacatgctggtctgtgttgtatcaatatccaattttttt
gtccttcgacctgatgaaaataaatcgctgcaagaatggacatgggagacgcttttaaac
gagcaactgggagataggatagtgagttttctgttaattgattcgagtgtggacacaccc
aaacttgcagttaccattcataaccagctacgcgtatacactctccttcatggggctttt
atcgtattcgacactttgattggtgcatctttttctaatattgaccacaaaagtgaatct
cttgttgctggtattaacagctttggttataacattcttggtggctttcggatcagaaaa
tattctttaagcagtggtaaacaagtctccaatataattggtccgcacacaagaatcaca
agtcttaattatgctgattgtcataacgacgaagttgtgattggttgttcagatcacaag
attcgaatttatgatttaaaaacagaaaaattgttgtttgtgatcaacgcaatagactct
gagatcacgaccttacagatggatgagtggaaagtggtaagtggtcataaagatggcaat
gtttgcttgtgggatcgatcaaatgatgctttgtgttggcagacgacacttaagcatcct
gtgcagttgtgtcgcttcaatgaaaactttttaacgattgtgaatattccaacagataaa
tttcctcaaaattcaaactggtttgccgatgatcttattcaacacagacggtacagagga
agtattcgagttatggactttacaaaagacacattcaatttcaccgttcctcacgaatgt
cgagcggagtataacaatataactggttatgattacaacattcaactgatcgctccctac
gatgatgttgcagcgctgaacttaccgaaattgtag
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