Hydractinia symbiolongicarpus: 130624965
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Entry
130624965 CDS
T09218
Name
(RefSeq) uncharacterized protein LOC130624965 isoform X1
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
hsy
Hydractinia symbiolongicarpus
Pathway
hsy03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hsy00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
130624965
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hsy03041
]
130624965
Enzymes [BR:
hsy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
130624965
Spliceosome [BR:
hsy03041
]
Complex C
Other components
Step II factors
130624965
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
NIBRIN_BRCT_II
KH_DEAH11
IBR
DEAD
OB_NTP_bind
FHA
BRCT
AAA_19
IBR_1
PTCB-BRCT
AAA_22
zf-RING_UBOX
RTT107_BRCT_5
IBR_2
zf-C3HC4_2
zf-C3HC4
zf-RING_2
ATPase
RING_XB3-XBAT31
AAA_30
NAT10_TcmA_helicase
RRM_DEAH11
Flavi_DEAD
zf-RING_5
Exonuc_VII_L
AAA_25
WHD_HA2
nSTAND_NTPase5
Motif
Other DBs
NCBI-GeneID:
130624965
NCBI-ProteinID:
XP_057296014
LinkDB
All DBs
Position
14:11007526..11028987
Genome browser
AA seq
2043 aa
AA seq
DB search
MWILKEQSGRGNCFRLLSGKTYTIGFDGSNHFILPEGNGISWKHAMFICEDEGKLEGAAV
RAEVILRDMSKYGTTVGSNFLQNSSVILNEGDTIQLGMQSYTFRFEIARHVVTSCITDPH
LLNKLKENLLLIGGTYVDRWSQNVTHLVMSKINLKLKLTCALASGVPIVTPEFFNDVISI
DSQYPAKKSYLPPIAVKEFEDQEFLFHVNTDRMKLLHRKTFVSLSKGQFDYIKPAIQSAA
GEIYIMQQFDTHILNCLTSKKMIVLELTTMDRKNETQEEKEWRATVEDAVKKSRIRMIPE
SEVCKAVITNSLEKYCNPSFSSSLDVSSRTVENNSPGSHGNPDVRKKLIPVTVKGEEKKS
YDVKVIFKDGISNKNGKKILKGVLGKKEYTLTSNERFTLVHMSKRKDAKSVSYALSKDRR
IKKAFFVEASDDEKGCTDLSNRDIVKAANFVKSCTDLRNAGIVKASNVGKSWTDLRNAGV
KKNDEQHRTAQNKVDHLWKQIIQQVDDASAQHEQKLEQAKEELRQVEERKKMNNQTLDQL
TSTLQLVTAKEKVVKELTDQKLEFFDNVKMIQDVFLRVPEPVTKLKQLQELALNVSLECQ
RLNAALPIYSKRSEIIRNISNHQVTILTAETGSGKSTQVVQYLYQVGYATSGVIVCTQPR
KVAALSLAKRVADEMKTNVGERVGYSVGTSKKKGQTTSILFMTDQVLLNECLRDRRLTKY
KCIVIDEAHERSIATDLLLAMIKQALKERPELRLIISSATIDPTVFEHYFQGMASRIHVA
GRTFPVGVYWEQVNKRHSYLEAAVEKAKQVHQEEHAGDILVFLTTPLETEKAQERLSNDR
NLQNKTSCLVLHGRLKQEEQQLVFDPAPDGKRKIVFATNSAETSITIPGIRYVIDTGMVK
EKHFDAKKNSSSLRIGPISKSSAEQRMGRAGRTQEGKCYRLYTEDEFDEMEDIMLPEILR
ENLGLALLKLFQFGVEDPLHYDFVESPPKHALESALKELIKLDAVRGNCLTETGEKMAAL
SIEPKLAKFVTLGIEGDFPLEAVIIAAICSVGGNVFFRAGSDEEKQIADRLKTRFCSSFG
DVLTLLEVYKEWLSIDDRSKNKWCTTNSMNAKTLRFTRELVNEMRSSLSKLCDIKFGDDF
NDMSLVSKKVPKMLFRCFKRNLAYYSGHQRGGYYRLGDTEEPYFIHPSSALSFLTMTPGW
VLFEEVLTTSRPYLLNVTAIPEEISNSLVGRDEESVVTAVCRKIVGKETAMRLGLGRYNG
RLEVSMQKLLHQKVFIDLDENIGEATLYTVRSIANEAIERFDEAISKEMKRGRIKIMEVP
ISDGNPYSLIIGEGGQSKNLLSQAEYTSVLFGNVKIKGENQVKTVEKIFARFGEVSDVIK
FKDGSFLWGKIVFTRPTDAQDAVCNKAALDDLEKMDTDKRIEVKPDLKNKLQAVTSQALK
IRANWTRRQGKGYGFLSFDNDEHRRDLLRHRSLLVGNTLYRFKGSNKNLNEVHVTGIDRF
YSNDQVKSAIAGYLPNVKITKCVIPRQESEIETPEVISALQRQLTMKIKQALDMEDSGKE
ALKVTVLPTKNQKDYDFRSLLCFQKVTTGQKLLRTNITMGQAMVRFTPELQSTVCIKERM
YRLFQEDIKTFQMNAEGYEVKIAEKTVRREKFFEIAISSKDMENLSVARQRLYDTTRGIN
MQCTEGLFRFYLTPMGRQFIDDVKKSIDCIIEIDRRSKCIIGYVRKDFSEGFQSLFEKQK
ANVNKDEEIFTIYLTKEKYPRGFIKRLLEKFGVDFKQLYDKSKANYIEMNFLRHTLEIFG
KQRSIDICSDMIQKLVSEVSEANIVVDETKTCPICFDSLSSRSHQLESCGHSYCKECIAN
MCKHAVKNNNLPIGCAAEDGCDDLVSIADISKFVETKVLVAAALDKMIVDNKSEYAYCVT
PNCCMIYRKSEIPDEEPFQCPICQQLICTFCSVEYHTNISCAKHKRGGEEDDDSIQIWLS
EPGKDRGICPKCTAPIERYDGCLHITCSKCKKHVCWRCKKAYFDRAEHCYDHICNCSGIL
NNS
NT seq
6132 nt
NT seq
+upstream
nt +downstream
nt
atgtggattttgaaagaacaaagtggtcgaggaaattgttttcgattgctttctggaaaa
acctatactataggttttgatggtagcaatcatttcatccttcctgaaggtaatggcatc
agctggaaacatgcaatgtttatatgtgaagacgaaggaaagcttgaaggtgctgcagta
agggctgaagtaatattacgggatatgtcaaagtatggcacaacagttggaagtaacttt
ctacaaaatagttcagtaattttaaatgagggtgacactatacagctaggaatgcaaagc
tatacatttagatttgaaatagctcgccatgtagtcacatcatgtattacggatccacat
ttgttaaacaagttgaaagaaaatcttcttttaataggaggcacttatgttgatcgttgg
tcacagaatgttacccatttggttatgagcaagattaatttaaaactaaaactcacttgt
gcactggcatcaggagtaccaatagtcacaccagaattttttaatgatgtcatttccatt
gacagtcaatatcctgctaagaaaagctatcttccacccattgctgtaaaagagtttgaa
gatcaagaatttttattccatgtcaacacagatcgtatgaaattgttgcataggaaaacg
tttgtttccctttcaaagggacagtttgactacatcaaaccagccattcaatctgctgca
ggagagatttacattatgcaacaatttgatacacatatactgaattgtctaacatcaaag
aaaatgattgtgttggaattaacaactatggatcgaaagaacgagacacaagaagaaaag
gagtggagagcgacagtagaagatgcggtaaaaaagtctcgtatccgaatgataccagaa
tctgaagtttgtaaagctgttatcacaaacagtctggaaaaatactgcaatcctagcttt
agcagcagtctggatgtgagttcccgcacggttgaaaacaatagcccgggttcacatggt
aacccggacgtaagaaaaaaactaattccggtaacagttaaaggagaagaaaagaaatct
tacgatgtgaaagttatatttaaagatgggataagtaacaagaatggaaagaaaattctg
aagggtgtgcttggaaaaaaagaatatactttgacaagtaacgaaagattcactttagtt
catatgtcaaaaaggaaagatgcaaaatccgtctcatatgcgctgagcaaagacagaaga
ataaagaaagcgttttttgttgaggcgtccgatgatgagaaaggttgcactgatttgagt
aatagagatattgtgaaggcggccaattttgtgaaaagttgcactgatttgcgtaatgca
ggtattgtaaaggcgtccaatgttgggaaaagttggactgacttgcgtaatgcaggtgtt
aaaaaaaatgatgaacagcatcggacggcgcaaaacaaagttgaccacctttggaagcaa
ataattcaacaagtggacgatgcttcggcgcaacacgagcaaaagttggaacaggcaaaa
gaagagttacggcaagtagaggagagaaagaaaatgaataaccaaacacttgatcaacta
acgtctacgttacagctagttactgcaaaagaaaaagttgttaaggagctaactgatcaa
aagttagaattttttgataacgttaaaatgattcaagatgtgtttcttcgcgtacccgaa
cctgtcacaaagttaaaacaattgcaagaattggccttgaatgtcagcctagagtgtcaa
cgcttaaatgcggcgttacctatctattctaaaagatccgaaatcattagaaatataagc
aatcatcaagtgacgattctaacggccgaaaccgggtcgggtaaaagcacacaagttgtg
cagtacctttaccaagttggctacgctacaagtggcgtgattgtgtgcacacaacctcgc
aaagtggcggcgttaagcttggctaaacgtgttgcagacgaaatgaaaacaaacgttgga
gaaagggttggctactctgttggcacgagtaaaaagaaaggacagacaacttccatcctg
tttatgacggatcaggtattactcaatgaatgtcttagagatcgcagacttacgaagtac
aaatgtattgttattgatgaagcacatgaacgaagtatcgccacagacctcttacttgca
atgatcaaacaagcgttaaaggaaagaccggagttgcgattaatcatttcgtcagccacc
atagatcctaccgtttttgagcattactttcaagggatggcttcgagaattcacgtagca
ggccgcacgtttccggttggggtttattgggagcaggtgaacaaacgacatagctatttg
gaggcggccgtagagaaagcgaagcaggtccaccaggaggagcacgctggtgatatactt
gtgtttttaacaacaccattggaaactgagaaagcacaagagagactgagcaacgatcga
aatttacaaaataaaacttcctgtttggtgctacatggaagactgaagcaagaagaacaa
caactggtcttcgatccagccccggatggcaaacgaaaaattgtgtttgcaacaaacagt
gctgagacatctataaccattcctggtattcgttacgtaatagacaccggcatggtcaaa
gagaagcatttcgatgcgaagaaaaattcaagttctttaagaattggcccaatctcgaaa
agttctgctgaacagaggatgggacgcgcagggcgtacccaggaaggtaaatgctacaga
ctgtacactgaggatgaattcgatgagatggaagatataatgctaccagaaatcctgcga
gaaaatctcggtctagcattgttgaagttatttcaatttggtgtggaagatcctctgcat
tacgactttgttgaatcgccgcccaaacacgccctagagtcggctttgaaggaactgata
aagttagatgccgtgagaggtaattgcttgacagaaacgggggaaaaaatggctgccctt
tccatcgaaccaaagttagctaagtttgtcacgttgggtatcgaaggcgatttcccgttg
gaagcagtgatcatcgcagccatttgttccgtgggtggtaatgttttctttcgtgctgga
tctgacgaggagaaacagattgctgatcgcttgaagacgaggttctgcagcagtttcggt
gacgttttaaccttgttggaagtgtataaagaatggttaagtatagacgatcgcagcaaa
aataaatggtgtacgacgaacagtatgaacgcaaaaacattacgttttactcgtgaacta
gtcaacgagatgagaagcagcctgagcaaactttgtgacatcaagtttggcgatgatttt
aacgatatgtctctcgtaagtaaaaaggtgccgaaaatgctgtttcgatgtttcaagaga
aatcttgcctattattctggtcatcagcgaggaggatactatcggttaggtgataccgag
gaaccctactttatacatccttcgtctgccttgtccttcttgacaatgacaccgggttgg
gtgttattcgaggaggttttgaccacgtctcgcccctacctgctcaacgtgactgctatt
ccagaggaaattagtaatagtcttgtgggacgtgacgaagagagcgtagttaccgctgtg
tgtcggaaaatagtcgggaaagaaacagctatgcggttaggacttggcaggtacaatggt
agactggaagtgagtatgcagaaattacttcatcaaaaagtttttatcgatctggacgag
aacattggagaagcgacgctatacactgttcgatctattgctaacgaagctattgaacgc
ttcgacgaagccatcagtaaggagatgaaacgtggacgaattaaaataatggaggtacca
attagcgatgggaacccttacagtttaatcatcggagaaggcggacagtccaaaaacttg
ctgtcacaagccgaatacacatctgttttatttggaaatgtaaaaataaaaggcgaaaat
caagtcaaaactgtcgaaaagattttcgctagattcggtgaggtatctgacgtaataaaa
tttaaggacggctcctttttatggggtaagatagtttttacacggcccacagatgcacaa
gacgctgtatgcaacaaggcagcgttggatgacttagaaaagatggacaccgataaaaga
attgaggtgaaacctgacctgaaaaataaactacaggcggtgacttctcaagccctaaaa
atacgagctaattggacacgaagacagggtaaagggtatggttttctttcatttgacaat
gacgagcatagaagagatttacttagacatcgttctctacttgttgggaatacgttgtac
cgttttaaggggagtaataaaaatctcaatgaagttcatgtaactgggatcgatcgtttt
tacagtaatgatcaagtcaaatctgctatcgcaggttatttacccaatgttaaaatcact
aaatgtgtgattcctagacaggagagtgagatcgaaacacctgaggttatttccgcgctg
cagaggcagttaacaatgaaaatcaaacaagctttggatatggaggatagtggaaaagaa
gctttaaaagtcacggtgttacctacaaagaaccagaaggactatgatttcagaagtctg
ctgtgctttcaaaaggtcaccacaggccagaagttactccgcaccaatataaccatggga
caggccatggttcgctttactcctgaacttcaaagcactgtatgcatcaaagaacgcatg
taccgcttgtttcaagaggatattaaaacattccaaatgaatgccgaaggttatgaagtt
aaaattgcagaaaaaacagtccgtcgtgaaaagttttttgaaattgcgatctcttcgaaa
gatatggaaaacctctctgtggcacgccagcggctttatgatactactcgtggtataaat
atgcaatgtacggaaggattgttccggttttacttgacaccgatgggtcgtcaatttatc
gatgatgtcaaaaagagtatcgactgcattatcgagattgatcgacgaagcaaatgtata
attggctacgttcgaaaagatttttccgagggattccagtcgttgttcgagaagcagaag
gcaaatgttaataaagacgaagaaatttttactatatatttgaccaaggaaaaatatccg
agaggttttattaagcgcttgcttgagaagttcggtgtggacttcaagcagctttatgac
aaatcgaaagcgaattatattgaaatgaattttctgagacataccttagaaattttcggc
aaacagagaagcatcgacatttgcagcgacatgatacagaaacttgtttcggaagtaagc
gaggcaaacatagtggtagacgagacgaaaacatgtccgatatgtttcgacagcttgagc
tcaaggagtcaccaactggaaagctgtggtcactcttactgtaaagaatgcattgccaac
atgtgtaagcacgcagtaaagaataacaacctacctatcggttgcgctgctgaagatggg
tgtgatgatcttgtcagtattgctgacatcagcaaatttgtcgagacgaaagttctcgtc
gcagccgcgctggataaaatgatcgtagataataaaagcgaatatgcttattgtgttaca
ccgaactgctgtatgatctacaggaaaagcgaaatacctgacgaagaaccatttcaatgt
cccatttgccaacagcttatttgtacattttgttccgttgaatatcacacaaatatatcc
tgtgcaaaacacaaaagaggaggagaggaggatgacgatagtattcaaatatggctgtcg
gagcctggtaaggatagaggcatttgtccgaaatgtacggctccgattgaaagatacgat
ggttgtctacatatcacgtgttctaaatgtaaaaaacacgtgtgttggagatgcaagaaa
gcatactttgatcgtgcagagcattgctacgatcatatttgcaactgttcaggaattctt
aataactcgtga
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integrated database retrieval system
