Hydractinia symbiolongicarpus: 130625400
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Entry
130625400 CDS
T09218
Name
(RefSeq) protein SEC13 homolog
KO
K14004
protein transport protein SEC13
Organism
hsy
Hydractinia symbiolongicarpus
Pathway
hsy03013
Nucleocytoplasmic transport
hsy04141
Protein processing in endoplasmic reticulum
hsy04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
hsy00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
130625400
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
130625400
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
130625400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsy03019
]
130625400
04131 Membrane trafficking [BR:
hsy04131
]
130625400
Messenger RNA biogenesis [BR:
hsy03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
130625400
Membrane trafficking [BR:
hsy04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
130625400
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
130625400
Autophagy
Other autophagy associated proteins
SEACAT/GATOR2 complex
130625400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
Motif
Other DBs
NCBI-GeneID:
130625400
NCBI-ProteinID:
XP_057296473
LinkDB
All DBs
Position
14:complement(19532775..19548933)
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AA seq
315 aa
AA seq
DB search
MAVNLMTTINTDHEDMIHDAQMDYYGRKLATCSSDRSVKIYEVVGESYKLTADLRGHDGP
VWQVAWAHPMYGTILASCSYDRKIIIWKEAGSDYQALYESQHHDSSVNSICWAPHEYGLL
LVCGATDGAVSIVSFQDGQWEVEKIPNAHSCIGCNAVSWAPPVQYQKSDQISGTGSFTYK
KRFVSGGCDNLIKIWCYSDAEGKWLEEDTLNAHSDWVRDVAFAPNCGLERSILASCSLDC
RVIIWRKNEKEGGSWVPQTLHKFKDAIWHVSWSIAGNILAVSGADNKISLWKEELDGNWV
RISDIEKGHGQPPLM
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atggcggtaaatctcatgaccacgattaacacagatcatgaagacatgattcatgatgca
cagatggattattatggacggaaattagcgacgtgctcttccgatcgatctgttaaaata
tatgaagttgttggtgaaagctataaattaactgcagacctgagaggtcacgatggtcca
gtatggcaagtggcgtgggcacatccaatgtatggtaccatacttgcatcttgctcatat
gatcgaaagattattatatggaaagaggctggtagtgactaccaagcattatatgaatcg
caacatcacgattcttcagtaaattccatatgttgggcaccacatgagtatggtttgtta
ttagtttgtggagctacagatggtgctgtatcaatagtgtctttccaagatggacaatgg
gaagttgaaaaaataccaaatgctcattcatgtatcggttgcaatgcagtcagttgggct
cctcctgtacaatatcaaaaatcagaccagatctctggaacaggtagcttcacgtacaag
aaaagattcgtctccggtggctgtgataatttaataaaaatatggtgttatagtgatgca
gaaggtaaatggttggaagaggatacgttaaatgctcatagtgattgggttcgagatgtc
gcttttgcaccgaattgcggcttagaaagatccatattggccagttgttccttagattgc
agagtcataatttggaggaagaatgaaaaagaaggtgggagctgggtaccacaaacgtta
cataagttcaaggatgctatatggcatgttagttggtccattgctggaaatatattagct
gtttcaggtgctgacaacaagatttcgctatggaaagaagaattagacggtaactgggtt
cgcatcagtgatatagagaaaggtcatggacagccacctcttatgtag
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