Hydractinia symbiolongicarpus: 130625641
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Entry
130625641 CDS
T09218
Name
(RefSeq) short transient receptor potential channel 4-like isoform X1
KO
K04967
transient receptor potential cation channel subfamily C member 4
Organism
hsy
Hydractinia symbiolongicarpus
Brite
KEGG Orthology (KO) [BR:
hsy00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
hsy04040
]
130625641
Ion channels [BR:
hsy04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
130625641
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
GCN5L1
VPS28
Motif
Other DBs
NCBI-GeneID:
130625641
NCBI-ProteinID:
XP_057296722
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Position
14:9527780..9537691
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AA seq
724 aa
AA seq
DB search
MTADITTIKTEIDFLLCEAVHRDCYDAVSLLLDFITGKDDSNQLTETNCNQCSVLTGTDR
NKVFVKSEFCDFQEHAVSKALINSAQHGNFQILKLFLSNGFGISEPHDFGCLCSVCSVDR
LGQSKRRIEHLKALSNPVWIGLTSTDPFLTAFKIYKKCKTLGRQEDCFEKTYHQLKDDCQ
RFCCQLLDQLESENEVICLMKYDEIRVKENGHLSFIKLAIEYEQKEVVAHPIPQHVISSL
VFDNVPGWRTSGLLYRICYIFLVACLFPLTSIMHVIAPCSVFGEFVKNPLVKFVNGAASF
VTLLVLLAVIATSEKAGIRTGETPTPIEATLFVWTISLLVHEFKQLIYQGKQEYFSIGWN
WIDISMITLMLCSYFMWTIMYFRNPSHKDESFKFFVSFADGFYALAIVLSFFRMVYLCQI
TRFLGLLQLCLGRMLQVIFQFAFISCVVLWSFSVGMVFLFHSSGKYEEIVRLADLKNQNQ
SAVHEMLSGGYNGLPATMVTLAWASMNMANLDSLEGLNDGTMIHLWSYFLFTLYHGVSMI
VLLNMLIAMMSNSYQQIENNIEVEHKYARTNLWLEYISGGNTLPCPFNLIPSHDALKKAC
RFFKSLHRRRSGKCKELENTSRVKSREEYTKLCKTLISRYFSQVKGVYFDDKDIPTNSPS
NEKFVTKLKSKLKAWSNLLQTSIPQDIIPGAEDGHYNPFFSENDSSTEMNGQKTRKENIE
VCRL
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgacggctgatataacgacgattaaaactgaaattgattttttgttatgtgaagccgtc
catcgggattgttacgatgctgtatctctactacttgatttcataacaggtaaagacgac
agtaaccagttaactgaaacaaactgcaaccagtgtagtgtgctaactggaacagacaga
aataaagtttttgtaaaaagtgaattctgtgattttcaagaacatgcagtaagcaaagcg
ttgataaattccgcgcaacatggcaactttcaaattttaaaattatttttatcaaatggc
tttggtatttcagaaccgcatgattttggctgtctttgttccgtgtgctcagttgatagg
ttgggacaatcaaaacgacgtatagaacatttaaaagcattgtccaaccctgtttggatc
ggcctaacatccactgatcccttcctgacggcttttaaaatctacaaaaaatgcaaaaca
ttggggaggcaagaggattgctttgagaagacctatcaccaattgaaagatgactgccaa
aggttttgttgtcaattgcttgaccaacttgaatcggaaaacgaagttatttgtttgatg
aaatatgatgaaataagagtaaaagaaaatggacatttatccttcataaagttggcaatt
gagtatgagcagaaagaggtggttgcgcaccctattccacagcatgttatctcatctctt
gtatttgacaatgtaccaggatggcggacctcaggtctattatacagaatatgttacatt
tttctcgtggcctgtctttttccactgacgtctataatgcatgttattgcgccgtgttcg
gtgtttggtgagtttgtgaagaatccacttgtgaagtttgtcaacggtgcagcttcattc
gtcacattgttagttctattagcagttattgctacgtctgaaaaagctggcatccgaaca
ggagaaactcccacaccgattgaagcaaccttgttcgtatggactattagtttacttgtt
catgagtttaaacagttgatatatcaaggcaagcaagagtattttagcattggatggaat
tggattgacattagcatgattactttaatgctttgctcgtacttcatgtggacaatcatg
tactttcgaaatccgtcacacaaagacgagtcctttaaattttttgttagctttgcggac
ggattttacgccctggcaattgtgctgagcttcttccgtatggtttacttatgtcagatc
acaagatttcttggtctactgcagctttgtttggggagaatgcttcaagttatttttcaa
ttcgcctttatcagctgtgtggtactgtggtcgttttctgttggtatggtgtttttgttt
cattcatctggcaagtacgaagagattgtacgattagctgacctgaaaaatcaaaatcaa
tcagccgtgcatgaaatgcttagcggaggctacaacggattacctgctactatggtaacg
ttagcctgggcaagtatgaacatggctaatctggacagtttagaaggtctcaatgatggt
acaatgattcatctgtggagctactttttgttcactctctaccacggtgtttccatgatc
gtgctgctaaatatgttgattgcaatgatgagtaattcctaccaacaaatagaaaacaac
attgaagtcgaacataagtatgctcgtacaaatctttggcttgaatacatcagtggtgga
aacacccttccttgtccgttcaatttaattccatcacacgatgctcttaagaaagcctgt
cgttttttcaagtcattgcatagaagaagaagtgggaagtgtaaggaattggaaaatact
tcgagagtaaagtcaagagaagaatacacgaaattatgcaagacacttatcagtcgttat
ttctctcaagtaaaaggggtttattttgatgataaagatataccaacaaattcaccatca
aacgaaaagtttgttacaaaattaaagtcgaaactaaaagcatggtcaaatttacttcaa
acatcaataccacaagatataatcccaggcgcggaggacggccattacaacccatttttc
agtgaaaacgattcaagtacagaaatgaatggacagaagacaagaaaagaaaatatagag
gtgtgcaggctatga
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