Hydractinia symbiolongicarpus: 130626117
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Entry
130626117 CDS
T09218
Name
(RefSeq) laminin subunit beta-1-like
KO
K06243
laminin, beta 2
Organism
hsy
Hydractinia symbiolongicarpus
Pathway
hsy04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
hsy00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
130626117
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Laminin_EGF
Laminin_N
LAMININ_IV_B
F5_F8_type_C
DUF1128
Motif
Other DBs
NCBI-GeneID:
130626117
NCBI-ProteinID:
XP_057297202
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All DBs
Position
14:complement(12931281..12950694)
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AA seq
1814 aa
AA seq
DB search
MVTRTVFRSTIVLVLLLTIKAQQECQRGGCFPATGDLLVGRASNLSASSTCGLNGRERYC
IVSFLDKTDKCFHCQSTREVDNRRDAYKNSHLPKYMITTSPQDRLKGWWQSQNGVQNVTI
QLDLEAEFIFTHLIMTFKTYRPKAMYIERSWNYGDDWTVYRFFAYDCAKSFPNVRRGPQQ
NIDDVICEERYSRIEPSTGGEVVMKVLDPIIQQKEDPYSVKVQNLLKLTNLRIRFTEFHT
FGDDVLGDRPEINQKYYYAIYEMVVRGSCSCYGHAEQCIAAGVTRNRDMVHGKCNCTHNT
SGRNCEHCKDGYADEPWRPAYKDQLNICRKCNCNGHTEKCHFDPAVYNATGRTSGGVCDD
CQHNTTGRQCEQCKPLYYRDPFKNIFDPDVCKPCDCDPSGSTGGGECETVTDPGARQLNG
QIGTVAGRCRCKANVEGPRCDRCKDGYWNMLESNPDGCQSCNCDGRGTISQQKCNQLDGD
CRCKRYVEGARCSKCLKGYWSLGSAPEGCQACDCDIGGSHNTTCDDISGKCDCRPNLMGR
KCDQVRPGHYFANLDHIKYEGENAIPGRGGTPFKVIRIFTSGEGSTFTGQGYLQVQEGSL
IDFTMIRVPYSGRYNVVMRYDTLSSGDWDDVRLKVSRADGGKLAGATCGYNEQTQFDLQT
VLRKDQKAVFVDKNVCLEKGVVYNVQIDFKSNNGHGNGQTLLDSIILVPKVENLGMFQGV
EGDERRSLYNSYNCRQYYLETNRADEAPEVCKNLQFSISSIMNNGGLPCQCDPVGTETSG
SSDILTCKAAGGQCPCKPGVIGRRCDQCAAGNYGFDADGCKACACNRTGSTSEFCHDTTG
QCQCLPQLVGRKCDSCPVNYYDFPNCKPCQCSGHSSTCDAKTGVCTNCDHNTAGENCEQC
AEGYYGDATKGTENDCQRCQCPGGGSGNQFSNICHEKKNGKVVCTNCTDEYTGDQCEKCG
DGYFGNPVVTGGICIKCDCSGNIDPLANGKCDATIGTCNDCVNNAAGDHCEKCKPGYFGN
AKNQTCKECVCNSLGTEPDYGGICNEVTGQCPCLQNVNGLQCDKCSPGFYNLASGKGCIS
CECDKEGSLEGSCNQLDGQCRCRVGFGGRSCSECEDNKWGNPKIPNGCNACGCNPVGSTT
LQCNRATGVCDCKQNVVGEKCNMCAPRTSDVMPKCENCHACNDQWEDIVKTLEEKVKNLI
KLRGNFTFNASEIALYTKEIQELKTHLKTIEAMFGNRSVEAGEVDDIRRRLQKFRNELMD
LDKEADTYVKIVQNTAIRNKNASDELDKLDIRAAKLKNNTLEFKTNVTEVIESNIGGALN
STRDSLRRSQEAQKVVDSSEQKIKDSKKLRRQIKKEIIMSTPSFEELDNNNNELVDNLTS
RVSDLELKLKELNELLCGDAGTCGGCTAAGCETCGASSNCTGIKQLANMALEKAGEAKST
LLQKKTNAEQTLRDIKMAEIAVNFSFDASEAAEVSSNKAKEIGEAALKNITALIKDVTDF
LNEEFKHPNVSKMLAQETLSLNISLTPAQVKDLARQIKVAVKNISGVDKILNESRKDYDT
AIKLKEEALRAKKFALFVMNKTKNVLDKLEEAMELQNSTTDNIAMARNQIEDVNKIIEQI
KAKLNIIDTDLLKSRNDTDNLGKKQAMISGMFADNRKRLAEAETEVENAEKLANEVNRTS
VTVEHKYDQTKDKLNDKINMTKIVQKRVQRLGDEAIELFAASALKLKQLNDLKRKYTKNE
ERVQDLLDQINRLEIKGATVRNRLQALSACHGDCNADIAQPICVSVLKEVDEEGKVRLKE
LEDAIKNRKSTKDQ
NT seq
5445 nt
NT seq
+upstream
nt +downstream
nt
atggtaacgagaacagtttttaggtccaccatagtcttagttttacttcttactataaaa
gcacagcaagaatgccaaagaggaggatgtttcccggctaccggtgatttacttgttgga
cgcgcaagtaatttatctgcatcatcaacttgcggtttgaatgggcgagaacggtattgt
attgttagtttcctcgataagacagacaagtgttttcattgtcagtcaacacgcgaggtc
gacaacagaagggatgcatataaaaatagtcatttaccaaaatatatgataacaacctca
cctcaagaccggcttaagggatggtggcaatctcaaaatggtgtccagaacgtcactata
caactagacttagaagctgagtttatatttacgcatttgattatgacgtttaaaacttac
agaccaaaggcaatgtatattgagcgctcgtggaattacggtgatgactggacagtgtat
cgatttttcgcttacgactgcgcgaaatcttttcccaacgtgcgtcgtggaccacaacaa
aacatcgatgacgtgatttgtgaagaaaggtattcaagaattgagccaagcacaggggga
gaggtcgtaatgaaagtgttggatccaatcattcaacagaaagaggatccctacagtgtt
aaagtccaaaatctattaaaactgaccaacttgcgaattcgttttactgaatttcatacg
tttggcgacgacgttctaggagatcgaccagaaatcaatcaaaaatattactatgcgata
tacgagatggttgttcgtgggagttgttcatgttatggacatgccgagcaatgtattgca
gctggggttacacgaaatcgtgatatggtgcatggcaagtgtaactgtacccataacact
tccggtcggaattgtgaacactgtaaagatggttatgctgatgaaccatggagaccagcc
tacaaagatcaactgaacatttgtcgaaaatgcaattgcaatggacacacagagaaatgt
cattttgatccagcagtctacaacgccacagggcgcaccagtggcggagtgtgtgatgat
tgtcaacacaacacgacaggtcgtcaatgtgaacagtgcaaaccgttatattatcgagat
ccattcaaaaatatttttgaccctgatgtgtgcaaaccttgtgattgcgacccatctggt
tcaactggtggtggtgaatgtgaaacagtcactgatccaggtgcacgacaattaaatgga
cagataggtacagtagctggacgttgtcgttgtaaagcgaatgtagagggtccacgttgt
gatcgatgtaaggatgggtattggaatatgttggaatcaaatccagatggttgtcagtct
tgcaactgcgatgggagaggaaccatttcgcaacagaaatgcaaccagttggatggtgat
tgcagatgcaagcgttacgtagaaggtgctcgatgtagcaaatgtttgaaaggatactgg
agtcttggttctgcccctgagggatgccaagcatgcgattgcgacattgggggttcacac
aacaccacatgtgacgatatctcaggaaagtgcgattgtcggccaaatttaatgggacga
aaatgtgatcaagtccgacctggacattattttgccaacctcgatcatatcaagtacgaa
ggagagaatgctattccagggaggggagggactccgtttaaagtcatacgcatattcacg
agcggagaaggttcgacatttactggtcagggatatctccaagttcaagagggatctctc
attgatttcactatgattcgtgttccatattcaggacgttataatgttgtcatgagatac
gataccttgtcttctggagactgggatgacgttcggctgaaagtgtcgagagccgacggt
ggcaaactagcaggtgcaacgtgtggatacaatgagcagacacaatttgatttgcaaact
gtgttacgaaaagatcaaaaagctgttttcgtcgataaaaatgtttgtctcgaaaaagga
gttgtttacaacgttcaaattgattttaaatcaaacaatggacatggcaatggacaaacg
ttgcttgattcaattatccttgtcccgaaagttgagaacctcggtatgtttcaaggagtc
gaaggtgatgaaagaagaagcctttacaatagctacaattgtcgacaatattatcttgaa
accaacagagcagacgaagcaccagaagtttgtaaaaatcttcaattctctatttcatct
attatgaataatggcggactgccttgtcaatgtgatccggtaggtacagaaacttctgga
tcaagtgatattttgacttgcaaagcagcaggaggtcagtgtccgtgcaagcccggtgta
attggacgcagatgtgaccaatgtgcggcagggaattacggatttgatgcagacggatgt
aaagcatgcgcttgtaatcgcactggttcaacaagtgaattctgtcacgacacaactgga
cagtgtcaatgtttaccacaactagtgggtaggaaatgtgactcgtgtccagtcaattat
tatgactttccaaactgcaagccatgtcaatgtagtgggcactcctccacatgtgatgcg
aaaaccggggtttgtacgaattgtgaccataacacggccggtgagaattgtgagcagtgc
gctgaagggtactatggtgatgccactaaaggtaccgaaaatgattgtcaacgctgtcaa
tgtccaggcggtggtagtggaaatcagttcagtaatatctgtcatgaaaagaaaaatgga
aaagtcgtctgcactaattgtaccgatgaatatactggtgaccaatgtgagaaatgcggt
gacgggtactttggtaatccggttgtaaccggaggtatctgtattaaatgtgattgcagt
ggaaacattgatccattggcaaacgggaaatgtgacgcgacaattggaacttgtaacgat
tgtgtaaacaacgcagccggtgatcattgtgaaaaatgcaagcccggttactttggaaac
gcaaaaaatcagacatgtaaagagtgcgtatgcaacagccttggaactgaaccggactat
ggcggtatttgcaacgaggtaaccggtcaatgtccttgtttacaaaatgttaatggttta
caatgcgacaaatgttcacctgggttttacaatctcgccagtggaaaaggatgtatatct
tgtgaatgtgacaaagaaggttcactggagggaagctgcaatcagttggatggccagtgt
agatgtcgagttggttttggtggaaggtcttgctctgaatgcgaggataataaatggggc
aatcctaagataccaaatggctgcaacgcatgtggctgcaacccggttggttccacgact
cttcaatgtaatcgcgcaactggagtgtgcgattgcaaacaaaatgtggttggagaaaag
tgcaacatgtgcgccccacgtacgtctgacgtgatgccgaaatgtgaaaattgtcacgct
tgtaacgaccaatgggaagacatcgtgaaaacgcttgaagagaaagttaaaaacttgata
aaattacgaggaaatttcacttttaatgcgagtgagattgctttgtataccaaagaaatt
caagaacttaaaactcatttaaagaccatcgaggcgatgtttgggaacagatcagtggaa
gctggcgaagtcgatgatatcagaagacgattgcaaaaatttagaaacgagttgatggat
ttggataaagaagctgatacgtacgtcaaaattgtacaaaatacggctataagaaataaa
aatgccagcgacgaattggataaactagacatccgagctgctaagttgaaaaacaacacg
cttgagtttaagactaatgtcacagaggtcattgaaagtaatattggtggagcgttgaac
agtacccgtgatagcttgcgacgttcgcaagaagctcaaaaggtcgtcgatagctctgaa
cagaaaatcaaagattctaaaaaattgagaagacaaattaaaaaagaaattatcatgtct
acaccctctttcgaagagttagacaacaataacaacgaattggtagacaatttaacatcg
cgagtaagtgatcttgaattgaagttaaaagaattaaatgagttattgtgtggagacgca
ggaacatgtggtggttgcacggccgccggttgcgaaacctgtggcgctagttcgaactgt
accggcatcaaacaacttgctaacatggctttagaaaaagctggagaagcaaagtcgact
ttacttcaaaagaaaactaatgcggaacaaacgctacgagacatcaaaatggcggaaata
gctgtaaatttctctttcgacgcttcagaagcggccgaagtatcttcaaataaagcaaaa
gaaattggagaagctgcattgaagaacataacagcgttgatcaaggatgtcaccgatttt
ctcaatgaagaattcaaacatccaaatgtgtcgaaaatgttggcacaagaaacgcttagt
ttaaacatatccttaactcctgcacaagtgaaagatctagccagacaaatcaaagttgct
gttaaaaacatttccggagttgataagattttaaacgaaagtcgaaaagattacgataca
gctatcaaattaaaagaagaagcattaagagcaaagaaattcgctttattcgtgatgaac
aaaacaaagaatgtattggataagcttgaggaagcaatggaactgcaaaacagcacaact
gataatattgcaatggcgagaaatcaaattgaagatgtgaacaaaattatagaacagatc
aaagctaaattgaatatcattgacacagacctactgaagtctagaaatgatactgataat
ttgggaaaaaaacaagccatgatctccggcatgtttgcagataatcgaaaacgacttgcc
gaagctgaaaccgaagttgagaatgcagagaagttagccaacgaagtaaataggacatcg
gttaccgtggaacacaagtatgaccaaacaaaagacaaactgaacgataaaattaatatg
accaaaattgttcaaaagcgcgttcaacgattgggcgacgaagcaatcgaattattcgca
gcgtcagcattaaaactaaagcaactaaatgatttaaagagaaaatataccaaaaacgaa
gaaagagttcaagatctactagatcagatcaaccgattggaaattaaaggtgccaccgta
cgcaatcgcctgcaagcgttatcagcgtgtcacggtgactgcaacgcagatattgcgcaa
ccaatttgcgttagtgttctaaaagaagtggatgaagaagggaaggttcgattgaaagaa
ctcgaagacgccattaaaaaccgtaaatcaactaaagatcaataa
DBGET
integrated database retrieval system