Hydractinia symbiolongicarpus: 130628683
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Entry
130628683 CDS
T09218
Name
(RefSeq) ATP-dependent DNA helicase RecQ-like
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
hsy
Hydractinia symbiolongicarpus
Pathway
hsy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hsy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
130628683
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsy03019
]
130628683
03400 DNA repair and recombination proteins [BR:
hsy03400
]
130628683
Enzymes [BR:
hsy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
130628683
Messenger RNA biogenesis [BR:
hsy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
130628683
DNA repair and recombination proteins [BR:
hsy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
130628683
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
RecQ_Zn_bind
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
130628683
NCBI-ProteinID:
XP_057297650
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All DBs
Position
15:complement(7705502..7707524)
Genome browser
AA seq
474 aa
AA seq
DB search
MDVLKRLDFVFNLHEGFPSHCFKPKQVQCFEALLKEDQVQFLNSVGISAMSLHCNNSSTS
SYESLFAEMKTHEEINISKKVQEGDINLLFAHPEAILSEQGRNLLKSTVYQDNVVGIVID
EAHCVEFWGEEFRKDFKELSTVRTYFPKASPHHITSLVKSLNMSTAKVIRVNPNRKNIFL
DKKIRKSNASGFESYENILLPIANSLNSVREQFPMTIIYMKLKYCGLAFNLFERILSTFQ
YVGFEKTPSSRLFCQYHAPQTKAMKQIIIKEISKKNSWIRVIFATTALGMGVNISHVEDV
YHITPPSNLEAYVQEIGRAGRSEQPATAILFYNNSDVSANKTNVDKNMKLYCQTSTCLRE
HIQKHFGFKHELQEKCCLICEKVELVEKPTTVRTRLTAKLRNELNKELCMALSNISEENS
IFLFGTPKELAADICYTSSQSNTGTPDLSMLHENIAKEVQNILSKKKPIQNHHK
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atggatgtgttgaaacgtttggattttgtatttaatttgcacgaaggttttccttctcac
tgctttaagcctaaacaagttcaatgttttgaagctcttttaaaggaagaccaagtgcag
tttttaaacagtgttggtatttcagcaatgtcacttcattgcaataatagttccacaagc
tcttatgaaagtttgtttgccgaaatgaaaactcatgaagaaatcaatatatcaaaaaag
gtgcaagaaggggatataaatctactcttcgctcatccagaggcaatactttccgagcaa
ggcagaaatttattaaagtcaactgtgtatcaagataatgttgttggaattgttattgac
gaggcccattgtgtagaattttggggagaagaatttagaaaagattttaaagaactttcc
acagtgcgcacttattttccaaaagcctcacctcatcatataacaagtttagtgaagtca
ttgaatatgtcaacagcaaaagttatcagagtaaatcccaaccgcaaaaacatatttctt
gacaaaaagatccgcaaaagtaatgcttctggattcgaaagctatgagaatatattgtta
cctatagcaaattcattaaattcagtaagagaacaatttccaatgacaatcatttatatg
aaattaaaatattgtggtcttgcctttaatctatttgaaagaattttaagcacatttcaa
tacgtgggatttgaaaaaacaccatctagtcgtttgttttgtcaataccatgcaccgcag
acaaaagctatgaaacaaattatcataaaggaaatttctaagaagaactcatggatcaga
gttatctttgctaccactgcgctcggaatgggtgttaatatttcacatgtagaagatgtt
taccacattaccccacccagcaatcttgaagcttatgttcaagaaataggacgagctggc
agaagtgagcaacctgcaacagctattttgttttacaataattccgatgtttcggcaaat
aaaacaaatgtggataaaaatatgaaattgtactgccagacatcaacttgcctaagggag
catattcaaaaacattttggtttcaagcacgaacttcaagaaaaatgttgtttaatctgt
gaaaaagtggaattggtagaaaaaccaaccactgtaagaactcgtttaacagcaaaatta
agaaatgaattaaataaggaactatgtatggccctatccaacattagtgaagaaaattca
atatttttgtttgggactcccaaagagcttgccgctgacatttgttacacaagctcacaa
tcaaacacaggtacccctgatttatccatgttacatgagaacattgctaaagaagttcaa
aatattttgtcaaaaaaaaaacccatccaaaaccatcacaaataa
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