Hydractinia symbiolongicarpus: 130628803
Help
Entry
130628803 CDS
T09218
Name
(RefSeq) plakophilin-4-like isoform X1
Organism
hsy
Hydractinia symbiolongicarpus
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
HEAT
HEAT_2
Motif
Other DBs
NCBI-GeneID:
130628803
NCBI-ProteinID:
XP_057297794
LinkDB
All DBs
Position
15:11164078..11185429
Genome browser
AA seq
1352 aa
AA seq
DB search
MAEGGVALHQNNFMNHHQNFYYSQTSSSRQTSKQYSQRENSSESYELNTTPSSRSRNNSH
GTDVLSSPEVIPRNRQINGQNPNQLGANNTINQFHTAENKYSRGQRRGEKLDMNNNAAGK
IQFFTPQVSRKDEHGERRHRPHSRSGYLSDGNRNNSRKKHQSIQNNNKGQLHLPSKFGHN
NGNRTDGSYYWDPNHFDQSDDESIQSDVLAEPFLSDQKSNRMYDNRISQTKQSSYSYTQQ
GNTNYSSHNGDVQYNASYQGNYEYNNEDPDISIGSLRSHDIMEHEEMYHFGTNMKRSASN
RSANRIPSRPSSVRSNRSSIRNGDLEEYDIITADQYSRPVSRQSSLSRRSEPPPYRQTNQ
FQTNSQSRTRNSSGSYAVKRSQTLPKNNGHAYYREEFRSSTLPRRPASTNTPEPTSEAIV
EEERVNADGSTVLIRRVVTATTTQAYHENEVPKVEVHISPATETLISPPLSPNHQLNTHL
HQQQTNSSSQMNSMSQYEQVTTTSYNHDNRYEMRADHQYNEDNDERVSVRGSERAYSGSG
SQPNSNPPYRPASQASSVHNRSSYGDNNQSRTMNTSFEYTEYQTRNDQSQRRSSKSSSVK
LPYGLQADGGGQSYITEEVITQNNIYLDEGAASGGLMDDDFNSGVVGSSTFGMEQTDYYG
SENHADSTKKSAQQNGVDLLDLLMYLKTDDSALKANTAGYIMHLSYNDDDAKRRIREVDI
IPLLVQLLDHEDEDCHRNAAGALKNLSYGHFIEDNKMAIRNCGGITACTRLLYRTSWIEV
REHVTGVLWNISSIETIKQDVLNEAVEAVAELIVIPLSGWEKEFAEMGKKPGVVTWSTLL
RNSTGVLRNVSSAGFEGRSKLRSIDGLVDSLVWILKAAIASKNNDINNKIVENVTCTLRN
LSYKVDVEIDRNVYPDAAKVTIKDGTDSNINDNQVNDNSNKNGSKGAKKEPTTELVPQDA
TKTGCIGMKKKPFVKRKTNRSKHPLSNGNKKPPPEQWKYLVPVQEHRPTPLGVELLWQQE
TVTIYSYLLTNSTNPITLEAAAAAIHNLCGCKWNWAGLLRVHIRLQKGIPPMHDLLSVDQ
EYVVRSIAYALRNLSIDRTNKWSIGKFAHTGLLQVLPTVKTYETDLKPADSTICAVLSVL
QTLAYKDYYNSKYIKDGGGIEKLIGLTREASSGRKQDEKPLRVYSERVILEANRVLLYMW
EFKDCRDAIKERPWSHSKAEDNEKAFKNASLKKSKSNTDAYAQMDRAEDVVIASRDSRRY
VDVEAEDDNENIDQSRVEKPPLEEYEMSNIGHGDVAHDETQDDEPLVRKNSSQKKKKNNW
FKKDNTEESKKGSKNKQDEKAKLVKGEEDSFV
NT seq
4059 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaggtggtgttgcattgcatcaaaacaactttatgaatcatcatcaaaatttt
tattattctcaaacttcatcatcgcgtcaaacatctaaacaatattcgcagcgagaaaac
tcttctgaaagttacgaattaaatactacaccaagctctcgcagtcgcaacaatagtcac
ggtacagatgtcctatccagtccggaagtgataccgcggaatcgacaaataaacgggcaa
aatcctaatcaattgggagcaaataatactattaatcaatttcatacggctgagaacaaa
tattcaagaggtcaacgtcgtggagaaaaacttgatatgaataacaacgctgcagggaaa
atacaattttttacgccacaagtttcgcgcaaagatgaacatggcgaacgacggcatcgg
ccgcattccagatcaggatacttaagtgacggcaaccgtaacaattccagaaaaaaacat
caaagtattcaaaataataataagggtcaacttcatttaccctcaaaatttggtcacaac
aatggcaacaggactgatggttcatattattgggatccaaatcattttgaccaaagtgac
gatgagtcaattcaatccgacgtgctagctgaaccttttctatctgaccagaaatcaaac
agaatgtatgataaccgaatttcacaaacaaaacaatcttcatacagttacacacaacaa
ggcaatacaaattactcatcacacaatggagatgttcaatacaacgcatcttatcaagga
aattatgaatacaacaacgaagatccagacatatcaattggttccctcagaagtcatgac
ataatggaacatgaagaaatgtaccacttcggaacaaatatgaaacgaagtgcatctaat
cgcagcgccaataggattcctagtcgacccagttctgtgcgatctaatcgttcatcaatc
cgaaatggggatttggaagaatatgatattataactgcagatcagtatagtcggccagta
tctcgtcaaagttccttatcacgtcgcagtgagcctcccccatacaggcaaacaaaccaa
tttcaaacaaacagccagtcacgtaccaggaacagcagtggtagttatgccgtgaaacgt
tcacaaacattgccgaagaataatggccatgcttattatcgtgaggaatttcgttcaagt
acattgccacggcgaccagcctcaaccaacacgccagagccaacttctgaagctatagta
gaagaggagcgtgtaaatgctgatggttcaacagtgcttattcggcgggttgttacagca
acgaccacacaagcctatcatgaaaacgaggtcccaaaagttgaagtacatattagccct
gctacagaaactctcatatctcccccattgtcaccaaatcatcaattaaatacgcactta
caccaacagcagacaaactcatccagtcaaatgaactcgatgtcccaatatgaacaagtg
actacaacttcatacaaccatgacaacagatatgagatgcgtgctgaccatcagtacaac
gaagataacgatgagcgagtttctgttcgaggtagtgaaagagcgtattcaggctcaggc
tcacagcctaacagtaaccctccatacagacctgctagccaggctagttctgtgcacaat
agatcaagttatggcgataacaatcaaagccgaacgatgaatacctcgtttgaatacaca
gaataccaaacacgtaatgatcaaagccagcgtcggtcatcaaaatcatcatctgtgaaa
ctgccgtacggtctacaagcagatggaggtggtcagtcttatattactgaggaagtgata
acacaaaataatatttacctcgatgaaggagcagctagtgggggtttaatggatgatgat
ttcaatagtggtgtagttggtagttctacgtttggaatggaacaaacggactactatgga
agcgaaaatcatgcggatagtacgaagaaatctgctcaacaaaatggcgtcgacctgctt
gacttactaatgtacttaaaaaccgatgatagcgccttgaaagcgaatactgcaggttat
atcatgcatctcagttataatgatgatgacgccaaaagaagaataagagaagtggacatt
attccactgttggttcaactgcttgatcacgaagacgaagattgtcatcgaaatgctgca
ggagcgctcaaaaatctctcctatggacatttcattgaagataataagatggcaattaga
aattgcggaggtatcacggcttgtaccagactactttaccgaacatcgtggatagaagtc
cgcgagcatgtcactggtgttctgtggaatattagctcaattgagacgatcaaacaagat
gttctgaacgaggccgtcgaagctgttgccgaactcatcgttattcctctctccggatgg
gagaaagagtttgcagagatgggaaagaaacccggtgtggtcacgtggtctacactatta
cgtaactctacaggcgtgttacgaaatgtttcgtctgccggttttgaaggacgctcaaag
ttgcgctccattgacgggctagttgactcgttggtgtggattttaaaagccgccatagca
tccaagaataacgatatcaacaataagattgttgaaaacgtaacttgcacactgaggaat
ttatcgtacaaagtcgatgtagagatagaccgaaatgtttacccagacgctgccaaggta
acaattaaagatggtaccgatagtaacatcaatgacaatcaagtaaatgacaacagtaat
aaaaatggtagcaaaggagcgaaaaaggagccgaccacagaacttgttccacaagacgca
actaaaaccggttgtatcgggatgaagaaaaaacccttcgtgaagcgaaagacaaatcgt
agcaaacatcctttatcaaacggcaacaaaaaaccaccccctgaacagtggaagtacctt
gtgcccgttcaagaacacagacccacgccccttggtgttgaattactatggcaacaagaa
acagtgactatttatagctatttgttgacgaattcaacgaatccaatcacgctagaggct
gctgctgcggctatccacaatttgtgtggttgcaagtggaattgggcaggcttacttcgt
gtacatatacgtctacagaaggggattccccctatgcacgatttgctctccgttgatcaa
gaatatgtagtgcgctccatcgcatatgctttaagaaatctgtctatagatcgcactaac
aaatggtccattggtaagtttgcccacactggcttactgcaagttttgcccacggtaaaa
acttacgaaactgacttgaagccagctgactcaaccatctgtgcagtattatctgtcttg
caaactctggcttacaaggattactacaactcgaagtatattaaagatggcggtggtatt
gaaaaactaattggcttaaccagagaagcatcgagcggacgaaaacaagatgaaaagccg
cttcgagtgtattccgaacgtgtcatcctcgaagcgaatagggttttgctctacatgtgg
gagtttaaagattgtcgtgatgctattaaagaacgtccgtggtcacacagcaaagcggaa
gataacgaaaaagcatttaaaaatgcatcattaaagaaaagcaagtcgaacactgatgcc
tacgcgcaaatggatcgcgctgaagatgttgtgatcgcgagccgcgattcaaggcgatac
gttgatgttgaagcggaagacgataacgagaacatcgatcagtcgcgtgttgaaaaacca
cctctggaggagtacgaaatgagcaacatcggtcatggtgacgttgcgcatgacgaaaca
caggatgatgaaccattggttcgtaaaaacagttcgcagaagaaaaagaaaaataactgg
ttcaaaaaagacaatacagaggagagtaaaaaggggtctaaaaataaacaagatgaaaaa
gccaagcttgtgaagggtgaagaggattcctttgtatag
DBGET
integrated database retrieval system