KEGG   Hydractinia symbiolongicarpus: 130628818
Entry
130628818         CDS       T09218                                 
Name
(RefSeq) DNA-directed RNA polymerases I, II, and III subunit RPABC1-like
  KO
K03013  DNA-directed RNA polymerases I, II, and III subunit RPABC1
Organism
hsy  Hydractinia symbiolongicarpus
Pathway
hsy03020  RNA polymerase
hsy03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:hsy00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    130628818
  09124 Replication and repair
   03420 Nucleotide excision repair
    130628818
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:hsy03021]
    130628818
   03400 DNA repair and recombination proteins [BR:hsy03400]
    130628818
Transcription machinery [BR:hsy03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     130628818
  RNA polymerase III system
   RNA polymerase III
     130628818
  RNA polymerase I system
   RNA polymerase I
     130628818
DNA repair and recombination proteins [BR:hsy03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      130628818
SSDB
Motif
Pfam: RNA_pol_Rpb5_N RNA_pol_Rpb5_C NA-iREase1
Other DBs
NCBI-GeneID: 130628818
NCBI-ProteinID: XP_057297816
LinkDB
Position
15:complement(9026155..9031592)
AA seq 210 aa
MDDEAEVYKMWRIRKTVMQMCHDRGYLVTQDELDQTLEQFIEQFGDRPSDGRPSRGDISV
LVAHNDDPTDQMFIFFPEEEKVGIKTIKQYCTRMQEESINRAIIVVQQGMTPSAKQALVD
MAPKYILEQFLENELLVNVTEHELVPEHVVLTPEEKAELLDRYKLKDHQLPRIQQGDTIA
RYYGLKRGQVIKIIRPSVTAGRYVTYRIVQ
NT seq 633 nt   +upstreamnt  +downstreamnt
atggatgatgaagcagaggtgtataaaatgtggcgcattcgcaaaactgttatgcagatg
tgtcatgatcgtggatatcttgtcactcaagatgaattggatcaaactttagaacaattt
attgaacaatttggtgataggccaagtgatggcagaccaagtcgtggcgacatatctgtt
ttagttgcacataatgatgatcccacagaccaaatgtttatttttttcccagaagaagaa
aaagtaggaatcaaaaccataaaacagtattgtactcgtatgcaagaagaaagcatcaat
cgtgcaatcatagttgtgcaacaaggaatgacaccttcagccaaacaggctttagttgac
atggctccaaaatatattttggaacagtttcttgaaaatgaattgttggtcaatgtgacg
gagcatgagttagtaccagaacacgtcgtgttgacacccgaagagaaggccgagcttttg
gacagatacaaactgaaagatcatcaacttccccgaatacaacaaggagacaccatagca
cgatactatggtttaaaacgaggacaggttatcaaaattattcgacccagtgtgactgca
ggccgttacgtgacatatcggattgttcaataa

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