Hydractinia symbiolongicarpus: 130628919
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Entry
130628919 CDS
T09218
Name
(RefSeq) transcription factor sox-3-like
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
hsy
Hydractinia symbiolongicarpus
Brite
KEGG Orthology (KO) [BR:
hsy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hsy03000
]
130628919
Transcription factors [BR:
hsy03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
130628919
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
130628919
NCBI-ProteinID:
XP_057297960
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All DBs
Position
15:4542437..4545409
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AA seq
302 aa
AA seq
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MYEKSNIPKVEPVEMVSNPMTSLNPHSQILAQQQQQHNGSGSPSPTLMTMPQQTNLSSGQ
TTLSPSQTNGDVAKKPDHVKRPMNAFMVWSREKRRKMAQINPRMHNSEISKILGAEWKRM
GEIEKQPYVEEAKRLQTQHSIEYPNYKYKPRRRKPKTMIKKDKMGFPYATDPNGIPTGMK
FPYPSPFPQDSMYAPIYQMPGAPPGYAMYADYGSPAIARQAMVPAQVRHSPGATTTASSV
HDFYSSMAMQTARITSAEMMPMTNDRYSSVVTQSNMPSFTTTPSLHIPSDSIAYSQMYAQ
RH
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atgtacgagaaatctaacataccgaaagttgagccagtcgagatggttagcaacccgatg
acaagcttgaatcctcactcgcagatacttgcacagcaacagcaacaacacaacggatca
ggttcaccctcccccacactgatgaccatgccacaacaaactaatctatcatctggacag
actacgttaagtccgagccagacgaacggagatgttgcaaaaaaacccgatcatgttaaa
cgaccaatgaacgcatttatggtgtggtcacgtgaaaaaagaagaaaaatggcgcagatc
aacccacgtatgcataattctgagatctcaaaaatcctcggagcagaatggaaacgaatg
ggtgagattgagaagcaaccatacgtcgaagaagcgaaacgtctccagacacagcacagc
atcgagtatcccaattataaatacaaaccgagaagacgaaagccgaaaacaatgataaaa
aaagataagatgggattcccttacgctacagatccaaatggcattccaactggcatgaaa
ttcccatatccttctcccttcccacaagactctatgtacgctcctatttatcaaatgcct
ggagcaccgcccggttacgctatgtacgccgattatggttcgccagccattgcaagacag
gctatggttcccgcacaagtacgtcattctcctggagctaccaccactgcatctagtgtc
cacgacttttactctagcatggctatgcaaacggctcgtattacatctgctgaaatgatg
ccgatgacaaatgatcgatatagttcagtagttacacaatcgaatatgccatcgttcacg
actacaccaagcttacacatccctagtgactctattgcttattcacaaatgtacgcccaa
cgacactga
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