Hydractinia symbiolongicarpus: 130629245
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Entry
130629245 CDS
T09218
Name
(RefSeq) E3 ubiquitin-protein ligase Siah1-like
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
hsy
Hydractinia symbiolongicarpus
Pathway
hsy04120
Ubiquitin mediated proteolysis
hsy04137
Mitophagy - animal
hsy04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
hsy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
130629245
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
130629245
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
130629245
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hsy04121
]
130629245
Enzymes [BR:
hsy01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130629245
Ubiquitin system [BR:
hsy04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
130629245
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_3
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
130629245
NCBI-ProteinID:
XP_057298367
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All DBs
Position
15:complement(603414..605916)
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AA seq
327 aa
AA seq
DB search
MTFLCIISSLYVHFRVENIKKNDINGLERIAIFVSLIMKMAGNRPVGTASPTTINTVLPM
NQSTTVPMNISSSSPTNPDLASLFECPVCFDYVLPPIFQCSSGHLVCSNCRPKLTICPTC
RGPLGSIRNLAMEKVANTVLFPCRYNSSGCLVTLPHTAKTDHEESCEFRPYACPCPGASC
KWQGSLDTVMPHLLHVHKSITTLQGEDIVFLATDINLPGAVDWVMMQSCFGHHFMLVLEK
QEKFEGHQQFFAVVQLIGSRKQAENFAYRLELNGHRRRLAWEATPRSIHDGIQSAILNSD
CLVFDTSIAQLFADNGNLGINVTISSC
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgacttttctatgtattatatcatccctttatgttcattttagagttgaaaatattaaa
aaaaatgacataaatggattagaaagaattgctatttttgtttctctcatcatgaagatg
gctggtaaccgaccggtgggtactgcaagtcctacaacaataaatactgttttacctatg
aatcaaagcactactgttcctatgaatatatcctcatctagccctaccaatccagatcta
gccagtttatttgaatgtcctgtctgttttgattatgttcttccacccatctttcagtgc
agtagtggacatttagtttgctccaattgtcgtccaaagttaacgatatgcccaacatgt
cgtggaccccttggcagtatacgcaaccttgccatggaaaaagttgcaaatacagttttg
tttccgtgtcgttataattcatcaggatgccttgttacattgccgcatacagcgaagaca
gatcacgaagagtcttgtgaattcagaccatatgcttgtccttgccctggtgcttcatgt
aaatggcaaggttctctagatactgttatgccacatttgttacacgtgcacaaatctatc
acaactcttcaaggtgaagacattgtatttttagccacagacataaatttacctggtgcg
gttgattgggtaatgatgcagtcttgttttggtcatcattttatgttagtcttagaaaaa
caagagaaattcgaggggcatcagcaattctttgcagttgtacaacttattggatccaga
aaacaggctgaaaattttgcctatcgattagaattaaatgggcatcgtcgaagacttgca
tgggaagctacccctagaagcattcatgatggtatacagtcagctattttaaatagcgat
tgtttggtgtttgatacaagcatagcacagttgtttgctgataatggtaacttggggatt
aatgtaacaatatcaagttgttaa
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