Hydractinia symbiolongicarpus: 130629257
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Entry
130629257 CDS
T09218
Name
(RefSeq) DNA repair protein XRCC4-like
KO
K10886
DNA-repair protein XRCC4
Organism
hsy
Hydractinia symbiolongicarpus
Pathway
hsy03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
hsy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
130629257
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hsy03400
]
130629257
DNA repair and recombination proteins [BR:
hsy03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
130629257
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XRCC4
XRCC4_CC
CC_Bre1
XLF
TMF_TATA_bd
DUF745
SKA2
Fib_alpha
Pox_A_type_inc
ERM_C
NPV_P10
Motif
Other DBs
NCBI-GeneID:
130629257
NCBI-ProteinID:
XP_057298378
LinkDB
All DBs
Position
15:complement(9691992..9699274)
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AA seq
211 aa
AA seq
DB search
MVERMHKISLNDKSFYLFSNQSVDDNLSSLTITNGDELYLGELSMQDIQEMASEVDMSIE
KYQALIKESFGYKSGSHDLGRFAYLLHGDGESYKFIIKQELEGGILFKLGSIVVHKQETS
SGKVIEIFDHLQDQLKSLQTEVSNFKSLSKSLEADKKDMCKRLEAYTSIKNSLEQDLYTK
FSLVLNEKKARIRELKTQLSRFWITYQNNTT
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
atggtagaacgtatgcataagatttcattaaatgacaaatcattctacctattctcgaat
caatctgtggacgacaatctttcatctttgacgataacaaatggtgatgagttatatctt
ggagagctgtccatgcaagatattcaggagatggcatctgaagtagatatgtcaattgaa
aagtatcaagccttgataaaagaaagttttggttataaaagtggctcacatgacttgggt
agatttgcatacctgttacatggtgatggtgaatcttacaagtttatcataaagcaagaa
ttagaaggtggaatattgtttaaacttggcagtattgtagtacacaaacaagagacatca
tctggcaaggttatagaaatatttgatcacttacaagatcaactgaagtcgctacagact
gaagtgtccaattttaaaagcttgtcaaaatcacttgaggcagataaaaaggacatgtgc
aaaagactagaagcatatacgtcaataaaaaacagtttggaacaagacttgtacactaag
ttttcgttggtgttaaatgaaaagaaggcacgaatcagggaattaaagacgcaactctcg
cgattctggatcacctatcaaaacaacacaacctga
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