Hydractinia symbiolongicarpus: 130629555
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Entry
130629555 CDS
T09218
Name
(RefSeq) nipped-B-like protein
KO
K06672
cohesin loading factor subunit SCC2
Organism
hsy
Hydractinia symbiolongicarpus
Brite
KEGG Orthology (KO) [BR:
hsy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hsy03036
]
130629555
Chromosome and associated proteins [BR:
hsy03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
130629555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
HEAT
Cnd1
Motif
Other DBs
NCBI-GeneID:
130629555
NCBI-ProteinID:
XP_057298794
LinkDB
All DBs
Position
2:complement(14054082..14083325)
Genome browser
AA seq
2048 aa
AA seq
DB search
MNKKENVPIATLAGTASLTDIASELPLPSSSGTKELPIFGNAQQASEANLLIHQPLHNGI
QLESITQLLGSVNNAYLDFKNSMYNRPSHFNEPSHLPTALQQVLSKSPTVLQPHFDTYHG
SPLKTNAMSALAYSPNQRNAFILHHQQQQQQQQQQMLYYHQPANMGQASPLIQGSQFSSG
SSSPMKSPHIQQFFKANNMSMHSPLVMHGNMTSPVINSPNVYSQQQQLKLIQQQQQQQLE
QTQQQQKLQHLQRMPELSNQEHTRNFGCSAAQPELRASTPLAKTTENLYNTATQNHNMIS
TSGQQAEEYFSPLKTRRQRHSTSTGTAKSHLTQPDDVRRNLTESQSFDGQNFHEIPVLTL
SKPPLLKKLHKKHRESSEGQLLNNVPHRNVHDQNHKQQDSVLPNSTALQDQKFELKVPKL
IVRKVKRLEGNDEIETLEVFSPDKEKQICRIQTPINNEECMNDYPEVRRSSKRSRSKSSS
VSSADSVKARKRKKANNRLSSDGEKTDLSFGSSVVKKLKHNEITDIEGIEVKAEVKKFVF
LMDKILDRELELEADGELDINEDAEIPPEALLPRPLITSLCVEVAKMKNSGMLNQIPVDQ
LVRIMSVMDRHVKDTSQLVISQEEDEEESKNWYSIQVERIIRSAEAASVILHITTTPNMP
KQVYLEEAIEHVASLCQFHLENTIYPEFDPIYKVTPDTKDSAFLPKSKRARNIGTNNKFT
LQVYNKFCEVVSLLGDLIGIESLTDSIILKMSQIGISPFFVEQVNILQLEALKVARIIFR
NYVKHRDLILDDILASLTKLPSSKRSLRSYRLQENICIQMFTALVLQLVQCTVQIPNKVE
TSDSQGDNLVDKDVLIVKSYEDALRAARNFMSVFLKKCSSNSRDENDFRPLFENFLHDLF
TVSNLPEWPAAEVLLTQLGRLFVVTFSNAKLDMSLRLTALDYLSQITTHLRKFALKSQAE
GEQEKLKLVVEKLLNTKECEDVPVIEDMEVYEEKLRKALLLYLQSCSDSDPSFKYAREFY
LGQWIRDVQMEIEKSMIAPMLSIPGAATKAEDDEAEQSKADLTAEKLQVLRETKEFYHKL
IGDKTTSLLRSGQSLNYETACTVVDHLASSRSFSQSFDLYMQQIFKMLSEQAIGLRTKAV
KALTMIVSVDSNILAREDVQASVHGRLLDPSTNVREAAVDLIGQFILKCPDLIKQYYDMI
IARILDTGVSVRKRVIKILRDICIEHPNFEKIPEMCARMVRRVDDEIGIKKLVTDVFRTM
WFQPVNDVHRQSNELYQKAVNITKVVSLCKDTGFDWLESLLHNLLDPDNQACKSTTICAC
QQLIDCLFHRLLKPELKSDTNTVVSCLITLYLFCKSYPKLLIPHAMTLQPYLSSKVNSST
DSLIMQHVSKILELVVPLMEHPNPKFLAELEEDTMKLMLQQSQNVVQSCASCLASIINNV
THNYKFIVDGFSQFMKFLTYYKREHVKSSNNPLLKTKKPTLLRALFTVGLFCRYFDLDVH
VPVKDEKNKATSSATSEVVFDICMYFTDFSDEEITTKAMLAIGFIGIRYPSLLLRDNCKR
LYKEILSPTYTATKVKFTVMRSLQNHLMEEENRLQQAEKTQGKQKTLKKEKLEDKNIKEF
GDVLSGTTSEIVQVLIKDIMKGFLHTEKQIRVSALQVVAIILRQGLIHPAQCIPYLIAIS
TDNERLCNIKAEQCLNDLDSRYPGFIHMKAFQGVKMSYELQTIIQKNNNGYLCGYRETEN
KIALISHVYGLVRSNKQYRRPFLLSLLKQFDDQNSSCDMLYYITENLAYLVYSSHEEPLF
VIYHIDTAVSVTGTNVLQNFKELFHPRVNSKSGKSPRNTSDSDDDEDTKQLSDVKVDKKA
LEKLVRQSFGCVLLLQLKQYLKSTFGFTDSKCQKYSPSEPSKLYDKTLTRKSEADFHSEY
KEMFFSPTIQYDAMIRYYVQFKEMMMSLDTDEESDSETPEKADVKHEDHDLATKTAAPIE
STDEKPPGEIVTGVVPQPVETTSLPGLSINIPVIPAHVYDEAPKQQKRGRSGSRRSSRSS
RASMTADG
NT seq
6147 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaaaagaaaatgtgccgattgcaacattggcaggaacagccagtttaacagac
attgcatcagaattgcctctaccatcttcatcaggaacaaaagaactccccatatttggc
aatgcacaacaagcgtcagaggccaatttattaatacaccaacctttgcacaatgggata
caattggaaagcattactcagttacttggtagtgtcaacaatgcttatctagatttcaaa
aattcaatgtacaatcgaccgtctcacttcaacgaaccatcacatttgccaacagctctt
cagcaagtactcagtaaaagtccaacagttttgcagcctcatttcgatacttaccatgga
tcaccactcaaaactaatgccatgtctgcgttggcttattcgccaaaccaaagaaatgca
tttattttgcaccatcaacagcagcagcaacaacaacaacaacaaatgctgtattaccat
caaccagcaaatatgggacaagcttctcctcttatacaaggatcgcaattttcatcagga
tcgtcttcaccgatgaagagtccacatattcagcagttttttaaagcaaataacatgtca
atgcacagtcctctagtgatgcatggtaatatgacaagtccagtaataaactcacccaat
gtctactcacaacaacaacaacttaagctaatacaacaacaacagcaacaacaacttgaa
caaacgcaacaacagcagaaactgcagcaccttcaacgtatgccagagctgtcaaaccag
gagcacacaagaaattttggctgctcagctgctcaaccagaattacgagcttcaacgcca
ctggcaaaaactacagagaatctatacaataccgcaacacagaatcacaacatgatctca
acctccggacaacaagccgaagaatatttctcaccattgaaaactagaagacagaggcat
agcacctctactggaacagccaagtctcatctaacacaaccagatgatgtccgaagaaac
ttaacagagtctcagtcttttgatggtcaaaatttccacgaaattccagttttaacttta
tctaaacctcctctgttaaaaaaattacataagaaacatagagaatcgagcgaaggacag
ttacttaataatgtacctcatcgaaatgttcatgatcaaaatcataaacaacaagactcc
gttcttcctaatagcactgctctgcaagatcaaaaatttgaattaaaggtccctaaactg
atagtacggaaagtgaaacgacttgaaggaaatgatgagattgagacgttagaagttttt
agtcctgataaggaaaaacaaatttgtcgaatacagactcccataaataatgaagaatgc
atgaatgattatccagaagttcgaagaagcagcaaacgttctcgtagtaagtcttcctct
gtgagctcagctgactctgtgaaggctcgaaaacgcaaaaaagcaaacaatagattatca
tctgatggagaaaaaactgatctatctttcggtagtagtgttgtgaagaaacttaaacac
aatgaaataactgatattgaaggcatagaggttaaagctgaagttaagaaatttgtattt
cttatggataaaattttggaccgtgaattagaattagaagcggatggagagcttgatatc
aacgaagatgcagaaatccctccagaagcattattacctagacccttgattacatctctg
tgcgttgaagttgcaaaaatgaaaaattctggaatgctaaatcaaattccagttgatcag
ctggttcgaattatgtcagtgatggatcggcatgtgaaagacacgtcacaacttgttata
tcacaggaggaggatgaagaggaaagcaaaaattggtattctattcaagttgagagaatc
attcggtcagccgaagctgcatctgttatacttcacattacaacaactcccaatatgcca
aaacaagtttatttagaagaagctattgagcatgttgcttcactttgtcaatttcacctt
gaaaatactatttatccagaatttgatccgatttacaaagtcacgccagacacaaaagat
tctgcatttcttccgaaatctaaacgtgctcgcaacattggtacgaacaataagttcact
cttcaagtttacaataaattttgtgaggttgtctcgcttcttggtgacttgataggcatt
gaaagtttaacagattccattattttaaaaatgtcacagataggtatatctccgttcttt
gtggagcaagttaacattctacaactggaagcattaaaagttgctcgaataatttttcgc
aattacgtgaagcacagagatttgatactggacgatattttggcatctttaacaaaatta
ccgtccagcaaacgaagtttacgaagttataggttacaagaaaatatttgtattcaaatg
ttcacggctttggtgctccaacttgttcaatgtacagttcaaattcctaacaaagttgag
acgtctgattcacaaggagacaatttggttgacaaagatgttcttattgtgaagagttat
gaagatgcactgagagctgctcgaaattttatgtctgtttttttaaagaaatgcagttca
aactctcgagatgaaaatgacttccgtccacttttcgagaattttttacatgatttattc
actgtctccaatttaccggagtggcctgcagctgaagtattactgacgcaattaggccgt
ctctttgtagtaacgtttagcaatgctaagcttgacatgagccttcgattaaccgcattg
gattatttatcacagattacaactcatttgagaaaatttgctcttaaaagtcaggctgag
ggagagcaggaaaaattaaaactagtggttgaaaaattattaaatacaaaagaatgtgaa
gatgttccagtgatcgaggatatggaagtatatgaagaaaaacttcgcaaagcgttattg
ttgtatctacaatcatgcagcgacagtgacccatcttttaagtatgcccgtgaattttac
ttgggacagtggatacgtgatgtgcaaatggaaatcgaaaaatcgatgattgctccaatg
ttatctattcctggtgctgccacaaaagccgaagacgacgaagctgaacagtcaaaggcc
gatcttacggccgaaaagttacaagtattgcgggaaacgaaagaattttatcataaacta
ataggtgataaaacaacatcacttctaagatctggtcaatctttaaattatgagacggct
tgtactgtggtcgatcatctagcatcttctcgttctttctcacaaagctttgatttatat
atgcagcaaattttcaaaatgctgagtgaacaagctattgggttaagaacaaaggctgta
aaagctctcaccatgattgtcagtgtcgattcaaatattctagcgagggaagatgtgcaa
gcaagcgtgcatggacgacttctcgacccatccactaacgtacgtgaagctgctgttgat
ttgattggtcaatttatattaaaatgtccagatttaataaaacaatattacgacatgatc
attgctaggatattagacactggtgtaagcgttcgtaaacgtgtcattaaaattttacga
gatatatgtattgaacatcctaactttgaaaagattcctgaaatgtgtgcaaggatggtc
agaagagtcgatgatgagattggtatcaagaaactagtaactgatgtatttcgtaccatg
tggtttcaacctgtcaatgatgttcatcgtcaaagcaatgagctataccagaaagctgtc
aacataacaaaagttgtatcgctatgtaaagatacaggatttgattggctggaaagtctt
cttcataatttattggatcccgacaaccaagcttgtaaatctaccacaatatgcgcatgt
cagcaactcatagactgtttatttcatcgcttgttaaaaccagaacttaaatccgacaca
aacacagttgtgtcctgtttaataactttatatttgttttgtaaatcgtatccaaagttg
cttatacctcacgctatgacgttgcagccgtatttaagttccaaagtgaattcatctaca
gatagtctcataatgcaacatgtgagtaaaatattagaacttgtcgttccactcatggaa
catcccaatccaaagtttttagcagaattagaagaagatacaatgaaacttatgttacag
cagtcacaaaacgttgttcaatcatgcgctagttgtttagcctcgattattaataatgtt
acgcataattacaaattcatcgtggatggttttagtcagtttatgaaatttttaacgtac
tacaaacgagagcatgtaaagtcatcaaataatccgttattaaagacgaagaaaccgacc
cttcttcgtgcactgttcactgtcggtcttttttgtcgctattttgatttagatgtacat
gttcctgtgaaagatgaaaaaaacaaggcgacatcgtctgcaactagtgaagtagtattc
gatatatgcatgtattttacagatttttcagatgaagaaataacgacaaaagctatgctt
gctattggttttattggtattcgatatccatccttgctgttacgtgacaactgtaagagg
ctgtacaaagaaatactgtccccaacgtacacagcgacaaaggttaaatttactgttatg
agaagtttacagaatcatctgatggaagaggagaataggttgcagcaagctgaaaagaca
caagggaaacaaaaaacgttgaagaaagaaaaattagaagataagaacataaaggaattt
ggtgatgttctttcaggcacaactagtgaaattgtacaagtgctgatcaaagacatcatg
aaaggttttttacacactgagaagcaaataagagtttcagcattacaggtcgtcgctatc
atcttaagacaaggtctcattcatccggctcagtgcatcccgtacctgatagcaattagt
acggacaacgaaagattgtgtaacatcaaagctgagcaatgcttgaacgatcttgatagc
cgctatcctggttttatccacatgaaagcatttcaaggagtgaaaatgtcgtacgaattg
cagacgatcatacagaagaacaataatggttatctatgtggctatcgtgaaacggagaac
aagatcgccttgattagtcatgtgtatggtcttgttcgttcaaacaaacagtatcgaaga
ccttttttgttgtctcttttaaaacaattcgatgatcagaattcgtcatgtgatatgtta
tactatatcacagagaatctcgcctacctggtgtacagttcacacgaggagcctcttttc
gtgatctatcacatcgatacagctgtgtctgtgactggtacgaacgtattgcagaacttc
aaagagttgtttcatccacgtgtaaactcgaagagtggtaagtccccacgtaacaccagt
gatagcgacgatgacgaagatactaaacagctgtcagatgtaaaagtcgacaagaaagcg
ttagaaaaacttgttcgacaatcgtttggttgtgtgttgttgttacaactaaaacagtat
ttaaaatcgacatttggtttcacggatagtaaatgtcaaaagtattctccgtcggaacct
tcaaagttatacgataaaactctcactcgtaaatcagaagcagatttccattcagagtac
aaagaaatgtttttctcacccacgatacagtatgatgccatgattcgttactacgtacag
tttaaagagatgatgatgagcctggatacagatgaagaaagtgacagcgagacgccggaa
aaagcagacgttaaacatgaagaccacgaccttgcgaccaagacggcagcgcctattgag
tctactgatgaaaagccacctggagaaattgttactggtgttgttccgcaaccggtcgaa
acaacttcgttaccagggctttctataaacatacctgttattcccgcgcatgtgtatgat
gaagcgccaaagcagcaaaaaaggggacggtcagggagtcgaagaagctcccgttcaagt
cgtgcatcaatgacagctgatggttga
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