Hydractinia symbiolongicarpus: 130629620
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Entry
130629620 CDS
T09218
Name
(RefSeq) general transcription factor 3C polypeptide 3-like
KO
K15201
general transcription factor 3C polypeptide 3 (transcription factor C subunit 4)
Organism
hsy
Hydractinia symbiolongicarpus
Brite
KEGG Orthology (KO) [BR:
hsy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hsy03021
]
130629620
Transcription machinery [BR:
hsy03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIC
130629620
TFIIIC, fungi type
130629620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_14
TPR_19
TPR_2
TPR_16
TPR_8
TPR_6
TPR_12
ANAPC3
TPR_1
TPR_CcmH_CycH
TPR_9
TPR_15
HAT_PRP39_C
ARM_TT21
TPR_11
TPR_Slam
DUF7017
PknG_TPR
BTAD
HrpB1_HrpK
TPR_EMC2
DALR_1
CC
Motif
Other DBs
NCBI-GeneID:
130629620
NCBI-ProteinID:
XP_057298872
LinkDB
All DBs
Position
2:complement(15260483..15279582)
Genome browser
AA seq
999 aa
AA seq
DB search
MDPTLYLSHPELLRYLSGEISFETWLDNQQGNSASSHRDESQSIALNVPVNNLGTPYDSM
ESTAAIFSSWGSAFTGSCSTGTSVTDNQSKNSGSNNKDIDTEDDNVVDDEDEDERDIFQP
KLTDDVFIVDKPSFQQLPPLAEDAQGIQGRQLIPFIESLVDIIPTCKVRDLGKQKQGLAE
NDDAPDIMKDFQNFQFRKRRRKGQSIVRNKLPELLRLQMGQANLLVAKGDFKKAADICME
IVREAPYSGLAFKTLAFIYEEQDNKEMSLQYSLISAFLDCRDSQEWQELSKKCLEAGNMK
QALVCFERACRYAPGNISLHWERAKMYLEVQEYKKCLDIYQQIVKLLHPSEPAPYMQLAK
EMAQFYHKNGMTEKAGETLEAAFATCPHYPDVEGVNMLSEILIGAKKYQEVIKLICSHCD
VVIPSSLQDFTHKEVKKREEDSINNLNAFVKKTTSTGFEELTLNIASQLAESAISSTNPL
LSSDGTYANTSKAYTTLQPMKHANLNPVNDKTYTNTFTIPSDLPLDIRIKLALCLIHTGQ
TLSIETVIEPLLKEDMNNVGDLVLDIAESFFENGRFQESLDYLLRLVESEKYNQAAVWLK
VAECYENLGEVHNSIEAYYQVISLAPLHASVRLTLANALRSVGRNEDAINVLADYDEACV
DDDGDEKIAINEENRLKLEQYEEWYKKCLVMYQEGRFRDFIYHSYILMCNYLMSGYNLQK
KQTVGKAHMWELLLKILNVSVKLKENKKAMNLLDQALQYKPYTESKKYRLELDYLQTTLY
FVSGEYSKAFDSFRVLISHEREAQINGTDVWNLFTQIANKMLDKRHHRYTLRFLFKKPKL
IPLILHNGNNSHMSGTYKYAIGEFSRAFREWPKYPLSSLLLAISFLHLSCQKFHKTRHTS
ILHGVIFLFQYFNLREGNQEAYYNVGRAFHQIGLVHVAVYYYQKALEFPLHAESTDASNA
TYHPFIDLHREAAYNLSLIYKNSGNIDLARKTLYKYCWI
NT seq
3000 nt
NT seq
+upstream
nt +downstream
nt
atggatccaacgttgtatttatctcatccggaattgttacggtacttgtctggagaaata
tcatttgagacatggttagacaatcaacaaggaaactctgctagctctcacagagatgaa
agtcaatccattgctttgaacgttccagtgaataaccttggcactccttatgatagcatg
gagtccacagctgccatattttcatcctggggaagcgcttttactggtagttgtagtacc
ggaacttctgttaccgacaaccaaagtaaaaacagtggtagtaacaacaaggatattgac
actgaggatgataatgtggtggatgatgaggatgaggatgaacgggatatatttcaaccg
aaattaactgatgatgtctttattgtggacaaaccatcctttcagcagttgccaccactg
gcagaagatgctcaaggaattcagggaagacagttgattccatttatagaatcgttggtg
gatatcataccaacctgcaaagttcgtgacctaggaaaacaaaaacaaggcttggctgaa
aatgatgatgcaccagacataatgaaagattttcagaattttcaatttcgtaaacgtcgg
cggaaaggacaaagcattgtgcgaaacaaactaccagagcttttacgtttacaaatgggt
caggctaacctgttggttgcaaaaggagattttaaaaaagcggctgatatctgtatggag
attgtacgagaagcaccatacagtggtttagcgttcaaaaccttggcttttatttatgaa
gaacaagacaacaaagagatgtctctgcaatattctctgatatctgcttttctggactgt
agagattcacaagagtggcaagaattatcaaaaaaatgtcttgaagcaggaaacatgaag
caggccttggtttgttttgagcgagcatgtcgatatgcaccaggaaatataagtcttcat
tgggagagggcaaagatgtatttagaagttcaagagtacaaaaaatgcttagatatatac
caacaaattgtcaagctacttcatccatcagaacctgctccctacatgcagttagccaaa
gaaatggcacagttttatcataagaatggtatgacagagaaggctggtgaaactttggaa
gctgcatttgctacatgcccacactatccagatgttgaaggagtcaatatgctaagtgag
atattgattggagctaaaaaatatcaagaagtcataaagttgatatgctctcattgtgat
gttgtgataccgtcttctctgcaagatttcactcataaggaggttaaaaagagagaagag
gacagcataaacaatcttaatgcttttgtcaaaaagacgacaagtacaggttttgaagaa
ctcactttaaacatagcatcacaacttgctgagtcagcaatttcaagcaccaatccgctc
ctttcatcagatggaacatatgcgaacacaagcaaggcgtatactactttacagccaatg
aaacatgctaacttgaatccagtaaatgataaaacttacaccaatacgtttactatacct
tctgatcttcctctggatattcgaatcaaacttgcattgtgtttaatacacactggccaa
accttatctatagagacagtaattgagccactgttgaaagaagacatgaataatgtgggt
gacttggtgttggatatagctgaatcttttttcgaaaacggtagatttcaagaatcactt
gactatttgttacgattggtagaatctgagaaatacaatcaggcggcagtgtggctgaaa
gttgcagaatgctacgaaaacttaggagaagtacacaacagtattgaagcatattaccaa
gtcatatctcttgcaccattgcatgcctctgtgcggttaactttggcaaatgcattgcgc
tctgtcggtcgaaacgaagatgctataaacgtgttagcagattatgatgaagcttgtgtc
gatgatgatggagatgaaaaaattgccatcaatgaagaaaacagattgaaacttgagcaa
tacgaggagtggtataaaaaatgtttggttatgtatcaagagggaagatttcgtgatttt
atttatcacagttacatcctgatgtgtaactacctaatgtctggatacaatcttcaaaag
aaacagacagtcggaaaagcacatatgtgggaattgttactcaaaattttaaatgtgtcg
gtgaagttgaaagagaacaagaaagctatgaaccttctcgatcaagcccttcaatataaa
ccgtacacggaaagtaaaaaatacagactcgaactagactacctgcagaccacattgtat
ttcgtgtctggagaatactccaaggcgttcgactcttttcgagtcttgatatcacacgaa
agggaggcccaaatcaacggtaccgatgtgtggaatttgtttactcagatagccaataag
atgctggataaacggcatcacagatatactcttcgatttctgtttaaaaaacccaagttg
attccgttgattttacacaatgggaataactctcacatgtccggtacttataaatacgct
atcggtgagttttcccgagcgtttcgtgaatggcccaagtacccactgagcagtttgcta
ctagctatctccttcttgcatttgtcttgtcagaagtttcacaaaacacgtcatacctcc
atacttcacggtgttatttttctctttcaatattttaatcttcgtgaaggaaaccaggag
gcgtattataatgtcggaagggcgtttcatcaaatagggcttgtacacgtggctgtatat
tactatcagaaggcgttagaatttccacttcatgcagaaagtacagacgctagcaatgcg
acatatcatcctttcattgacctgcatcgagaagcagcatacaatttgtcgttgatttat
aagaacagtggaaacatagacttagctcgtaagaccctgtacaagtattgttggatttag
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