Hydractinia symbiolongicarpus: 130629646
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Entry
130629646 CDS
T09218
Name
(RefSeq) transitional endoplasmic reticulum ATPase-like
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
hsy
Hydractinia symbiolongicarpus
Pathway
hsy04137
Mitophagy - animal
hsy04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
hsy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
130629646
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
130629646
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsy03019
]
130629646
03009 Ribosome biogenesis [BR:
hsy03009
]
130629646
04131 Membrane trafficking [BR:
hsy04131
]
130629646
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hsy04147
]
130629646
Messenger RNA biogenesis [BR:
hsy03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
130629646
Ribosome biogenesis [BR:
hsy03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
130629646
Membrane trafficking [BR:
hsy04131
]
SNARE
SNARE associated proteins
Others
130629646
Autophagy
Aggrephagy
Other aggrephagy associated proteins
130629646
Exosome [BR:
hsy04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
130629646
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
AAA_33
CDC48_2
AAA_5
AAA_2
AAA_22
TIP49
AAA_14
RNA_helicase
NPHP3_N
AAA_28
Parvo_NS1
Mg_chelatase
nSTAND3
AAA_17
AAA_18
AAA_7
IstB_IS21
ABC_tran
Vps4_C
ATPase_2
DUF815
ResIII
Viral_helicase1
AAA_24
NB-ARC
Sigma54_activat
TsaE
NACHT
SLFN-g3_helicase
AAA_lid_PRS2_C
KAP_NTPase
Zot
Motif
Other DBs
NCBI-GeneID:
130629646
NCBI-ProteinID:
XP_057298906
LinkDB
All DBs
Position
2:complement(15696878..15708496)
Genome browser
AA seq
810 aa
AA seq
DB search
MAQNQDELATAILKTKAKPNRLMVEEAVTDDNSVVTLSPEKMEELQLFRGDTVLLKGKRK
KETVCIVLSNDDASTNDKIGMNRVVRQNLRVRLGDIVSVQACPDVKYGKRIHVLPIDDTV
EGLTGSIFDVYLKPYFLEAYRPVCKGDLFQIRGGMRAVDFKVVETDPSPYCIVAPDTVIH
CEGEAIKREDEEEALNEVGYDDVGGCRKQLAQIKEMVELPLRHPQLFKALGIKPPRGILL
YGPPGTGKTLIARAVANETGSFFFLINGPEIMSKLAGESESNLRKAFEEAEKNSPAIIFI
DEIDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRSHVIIMAATNRPNSIDPALRRFGRF
DREVDIGIPDATGRLEIIRIHTKNMKLDDEVDLEQIAAETHGYVGSDMASLCSEAALQQI
REKMDLIDLEEESIDAEVLDSLAVSMDNFRFAMGATNPSALRETVVEVPNVTWNDIGGLE
KVKRELQELVQYPVEHPEKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIK
GPELLTMWFGESEANVRDVFDKARMAAPCVLFFDELDSIAKSRGGSAGDGGGASDRVINQ
ILTEMDGMGAKKNVFIIGATNRPDIIDSAILRPGRLDQLIYIPLPDEPSRMSILKANLRK
TPISTEIDLGYLAKVTHGFSGADLTEICQRACKLAIRESIEKDIEREKQRDANADNDMDM
EDEEDPVPEIRRDHFEESMKFARRSVSDNDIRKYEMFAQTLQQSRGLGTNFRFPGAQQGG
GGGGGGAAPGGGNSQQPNLYEENADDDLYS
NT seq
2433 nt
NT seq
+upstream
nt +downstream
nt
atggcacaaaatcaggatgaactggccactgctatacttaaaacaaaagctaagccaaac
aggctcatggtggaagaagcggtaacagatgataactcagtcgtcacattatctccagaa
aaaatggaagaattacagttgtttcgtggtgatactgtgctattaaaagggaaaaggaaa
aaggaaactgtttgtattgtgttgtcaaatgacgatgccagcacaaatgataaaattgga
atgaacagagtagtacgacaaaatctgagagttcgacttggagatattgttagcgtgcaa
gcatgtccagatgtgaaatacggcaagaggatacatgttcttccaatagatgacactgta
gaaggattgactgggagcatatttgatgtatacttaaagccctacttccttgaagcttac
agaccagtgtgcaaaggagatctttttcaaattcgtggaggcatgagagctgtcgatttt
aaggttgttgagactgatcctagcccgtattgcattgttgctccagacactgttatacat
tgtgaaggggaggctatcaagcgagaggatgaagaagaagcattaaacgaagttggatat
gatgatgttggtggctgtagaaaacagttagcccaaataaaagaaatggttgaacttcca
ttgaggcatcctcaattgttcaaagctcttggtataaaaccaccaagaggtattcttctg
tatggccctcctggaacaggaaagacactgattgctagggctgttgctaatgaaacagga
tcattcttctttctaatcaatggtcctgagatcatgagtaagcttgctggtgaatctgaa
agtaatctgcgaaaagcttttgaagaggcagaaaagaattcaccagcgattatcttcatt
gatgaaattgacgccattgcacccaaacgagagaaaacacacggtgaagttgaaaggaga
attgtatcacagctgttgacacttatggatggcttgaagcaaagatcacatgttataatt
atggctgctacaaacagaccaaacagtatcgaccctgcgctaagacgatttggtcgtttt
gacagagaagtggacattggtatcccagacgcaacaggccgattagaaattatacgcatc
cacacaaagaacatgaaattagatgacgaagtcgatttggagcaaattgctgctgaaact
catgggtatgtgggatcagacatggcttcactctgctccgaagcagctcttcagcagatt
cgggaaaaaatggatttaattgatcttgaagaggaatctattgatgctgaagtgttggac
tcacttgctgtttctatggataactttagatttgctatgggagcaactaatccatcggcg
ttacgagaaactgttgttgaagtgccgaacgtaacctggaacgacattggtggacttgag
aaagtaaagcgtgagttgcaagaactggtacagtacccagtcgaacatcccgaaaagttc
ttgaagtttggaatgaccccatccaaaggtgtcttgttctacggtccgcctgggtgtggt
aaaactctgttggccaaagccattgctaacgaatgccaggcaaatttcatttcgatcaaa
ggtcctgagttgttgacgatgtggttcggagaatctgaagccaacgtcagagacgttttt
gacaaggctagaatggctgcaccgtgtgtgctgtttttcgatgaattagactctatcgcc
aaatctcgtggtggaagtgcgggtgatggcggtggtgcttccgatcgtgtcatcaatcaa
attctcacagaaatggacggtatgggagctaaaaagaacgtgtttatcatcggagctact
aacaggccagatattatcgattctgcaatcttacgtccaggtcgtcttgatcagcttata
tacattccactaccagacgaaccatctaggatgtccatcttgaaagctaatctccgtaaa
actcctatctcaaccgagattgacttgggatatctggctaaagtaacacacggtttcagt
ggtgctgatctgaccgagatttgtcaacgggcatgtaaattagctattcgagaatctatc
gagaaagatatcgaaagagaaaaacaaagagatgctaacgctgataatgacatggacatg
gaagatgaagaggatccagtacccgagattcgtcgtgaccatttcgaagagtcaatgaaa
ttcgctcgtagatcagttagcgacaacgatattcgaaaatacgaaatgttcgcgcaaacg
ttgcaacaaagtcgtggtttaggaactaattttaggtttccgggtgctcaacaaggaggt
ggcggtggcggtggcggagctgctcctggcggtggaaactctcaacagcccaatttatat
gaagagaatgctgacgacgatctgtacagctaa
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