Hydractinia symbiolongicarpus: 130629654
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Entry
130629654 CDS
T09218
Name
(RefSeq) pre-mRNA-splicing factor 38A-like
KO
K12849
pre-mRNA-splicing factor 38A
Organism
hsy
Hydractinia symbiolongicarpus
Pathway
hsy03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hsy00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
130629654
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hsy03041
]
130629654
Spliceosome [BR:
hsy03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
130629654
Complex C
U4/U6.U5 tri-SnRNP related factors
130629654
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Gene cluster
GFIT
Motif
Pfam:
PRP38
PRP38_assoc
CDC45
Motif
Other DBs
NCBI-GeneID:
130629654
NCBI-ProteinID:
XP_057298917
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All DBs
Position
2:complement(15938993..15948178)
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AA seq
275 aa
AA seq
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MANRTVSDAKTIRGTNPQYLVEKITRTRIYESKYWKEECFALTAELLVDKAMALEHIGGT
FGGNIKPTPFLCLVLKMLQIQPEKDIIVEFIKNEDYKYVRALGAYYMRLVGTSLECYKYL
EPLYNDYRKMKRKDKNGVFHVIHMDEFIDEMLREERVCEIMLPRIQKRHVLEELEELEPR
VSALEDDIDDMESDDDDDMKDSPPRKRSETPERRRRKSRSPERRRRSRSASPHRRSRRSP
SPRRHKHRSRSRSRSPRRRRHRSRSRSRSPKRSRR
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atggctaacagaacagtgtctgatgctaaaaccatcagaggcacaaatcctcaatacctt
gtcgaaaagattacaagaactagaatttatgagagtaaatactggaaagaagaatgtttt
gcacttacagctgaactgctggttgataaagccatggctttggagcatattggtggaacg
tttggcgggaacatcaagcctacacctttcttgtgtttggttttgaagatgttacaaatt
caaccagaaaaagatatcattgttgagttcatcaaaaatgaagattataaatatgttcga
gcgcttggtgcgtattacatgagactcgttggaacatccttagagtgttacaagtatctg
gaacctctttataacgattacagaaaaatgaaaagaaaagataaaaatggagtgttccat
gttattcacatggatgagttcatcgacgaaatgttaagggaagagcgagtttgtgagatc
atgctaccacgaatacagaaacggcacgttttagaggaactggaagaacttgaacctaga
gttagtgcgttggaagatgacattgatgacatggagtctgatgatgacgacgatatgaag
gattctccaccgaggaaacgcagtgaaacaccagagaggaggagacgaaagagtcgctct
ccggagagaagacgcaggtctcgctcagcatcgccacaccgtcggagtcgtagaagtcca
agtccacgacgccacaagcatcgaagtagaagtcgttcgaggtcacctagacgaagacgt
caccgctcacgatctcgttctcgatctcccaaacgcagtagaagatag
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