Hydractinia symbiolongicarpus: 130629908
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Entry
130629908 CDS
T09218
Name
(RefSeq) probable ATP-dependent RNA helicase vasa-like
KO
K13982
probable ATP-dependent RNA helicase DDX4 [EC:
5.6.2.7
]
Organism
hsy
Hydractinia symbiolongicarpus
Brite
KEGG Orthology (KO) [BR:
hsy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hsy03036
]
130629908
Enzymes [BR:
hsy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
130629908
Chromosome and associated proteins [BR:
hsy03036
]
Eukaryotic type
Gene silencing
piRNA pathway
130629908
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
zf-CCHC
Helicase_C
zf-CCHC_2
zf-CCHC_3
ResIII
CMS1
HEM4
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
130629908
NCBI-ProteinID:
XP_057299267
LinkDB
All DBs
Position
2:complement(19138512..19147275)
Genome browser
AA seq
792 aa
AA seq
DB search
MADEWDETPSSNGGFESSTSGGGFGGGFGGSKGGGFGTGGGGGGFGGGNNGFANGDKGSS
GGGGGFGRGGGGGFGRGGGGGGFGRGGGFGGSSSSGGSGCRKCGEEGHFARECPQGGGGG
GGSRACFKCGEEGHISRDCPQGGGGGGGNRTCHKCGEEGHISRDCTNSSNTGGGFGGGST
SGGFGGGFGGGSTKPSSGFGGGFGSSSNSNPNGFGGGFGGGDDDTAGGGGGFGGGSGGGD
DCCRICKQSGHFARDCPDKPERDDKCRRCGESGHFVKDCTQEPTLDPDRPAPVTYVPPEP
SEAEEDMYKTIAQGINFDNYDNIPVEVTGPGNIPAAIRSFSEAGLSESIQKNIEKAKYVK
PTPVQKYAIPIILGERDLMSCAQTGSGKTAAFLLPVLASIMQNKDQLTSQLSEVQAPLGL
VIAPTRELANQIYQEARKFSFQTSVRPVVVYGGVSVAYQLRQVQSGCHLLVGTPGRLKDF
IGKRKISLENLKYLVLDEADRMLDMGFMPDVKEIIHGFGMPAKEDRHTLMFSATFPEEIQ
KLAGEFLNNYVFLTIGKVGSTHSDIEQTVIEVDNASKRDKLVEMLGQEGGNKNLVFVQTK
RQADFLASYLCQNGFPTTSIHGDRFQQQREEALREFRAGQQTVLIATAVAARGLDIADVK
QVINYDLPDEIEEYIHRIGRTGRIGNKGRATSFFSRGNDEGLARALVKTLADSEQVVPDW
LEEVAETALGTGYGPKGGRFASKDTRRGGGMAGGGGRFNAVGNDDGWNNSNDTNGSGGTT
INSGGGGEDEWD
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atggctgatgaatgggacgagactccaagttccaatggaggttttgaaagtagcacatca
ggtggtggctttggaggtggctttggtggcagtaaaggtggtggttttggaacaggtggt
ggtggtggtggttttgggggtggaaacaatggctttgcaaatggtgataagggcagttct
ggtgggggtgggggtttcggtagaggtggtggtgggggtttcggtagaggtggtggtggt
gggggtttcggaagaggtggtggttttggtggtagtagtagcagtggaggaagtggctgc
agaaaatgtggtgaggaagggcattttgctagagagtgtccgcaaggaggaggtgggggt
ggagggagcagggcttgttttaagtgtggtgaggaaggtcacatttctagagattgtcca
caaggtggtggtggtggtggtggtaacagaacatgtcataagtgtggtgaagagggtcat
atttccagagattgcacaaacagcagcaatactggtggaggattcggtggtggaagtacc
tctggtggctttggaggtggttttggtggaggcagtacaaagccatcaagtggttttggt
ggtggctttggcagcagcagtaacagcaatcccaatggctttggaggaggatttggaggc
ggagatgatgatactgctggtggtggtggtggttttggaggtggcagcggaggaggtgat
gactgttgtagaatatgcaagcaatcaggacattttgcacgagattgcccagacaaacca
gaaagagatgataagtgcaggcggtgtggtgaaagtgggcattttgtaaaagactgtaca
caagagcccactttagaccctgatagacctgcaccagtcacatatgtaccgccagagcca
tctgaagcagaggaggacatgtacaaaacaatagcacagggcattaattttgataactac
gataacatccctgttgaagtaacaggccctggaaatatacctgctgctatcagaagcttc
tcagaagcagggctatcagagtctatacaaaaaaacatcgaaaaagcaaagtatgtaaaa
cccacaccggtccagaaatatgctattccaattattcttggggaaagggatttgatgtct
tgtgctcaaactggttctggaaaaactgctgcattcttattgccagttttggccagtatt
atgcaaaataaagatcagctcactagccaactaagtgaagtacaagccccccttggtttg
gtcattgccccaacacgtgaattggctaatcaaatataccaagaggctcgcaagttttct
tttcaaacaagtgttcgtccagttgttgtttatggtggtgtgtcggttgcgtaccagtta
cgacaggttcagagtggttgtcatttactcgtcggaacaccaggcagactaaaagatttt
attggaaaaagaaagatatctcttgaaaatttaaaatacctagtccttgacgaagcagac
agaatgcttgacatgggttttatgccagacgttaaagaaatcatccatggtttcggaatg
ccggccaaagaggaccgtcacacgttgatgttcagtgccacgtttcccgaggagattcaa
aaattggctggcgagttcttaaataactacgttttcttaactattggtaaagttggaagt
actcactctgatattgaacaaacagtcattgaggtcgacaatgcgtctaagcgagacaaa
cttgttgaaatgctgggacaagaaggtggcaataaaaacttagtatttgtgcaaacaaaa
agacaggcggatttcctggcaagttatttgtgtcaaaatggctttccaacgactagtatt
cacggcgatcgatttcaacagcaacgagaagaagctctgcgcgaatttcgagccggccag
caaactgttcttatcgctacagccgtggccgcacgcggtttggatattgcggatgtaaag
caggtaatcaactacgacctaccggatgagatcgaggagtatattcatcgtatcggtcgt
actggtagaatcgggaacaaagggcgtgctacgtcgttcttttcgcgtggaaatgacgaa
ggactggcgagagcgttggtcaaaacattggctgattctgaacaagtagtacctgattgg
ttggaagaggttgccgagacagctttaggtactggatatggaccaaagggtggcaggttc
gcctccaaagacactcgacgtggtggaggtatggccggtggaggtggccgatttaacgcc
gttggaaacgacgatggttggaataacagcaacgacactaacggtagcggcggaacgacc
ataaacagcggtggtggtggggaggacgagtgggactaa
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