Hydractinia symbiolongicarpus: 130630258
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Entry
130630258 CDS
T09218
Name
(RefSeq) ubiquitin-protein ligase E3C-like
KO
K10589
ubiquitin-protein ligase E3 C [EC:
2.3.2.26
]
Organism
hsy
Hydractinia symbiolongicarpus
Pathway
hsy04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
hsy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
130630258
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hsy04121
]
130630258
Enzymes [BR:
hsy01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
130630258
Ubiquitin system [BR:
hsy04121
]
Ubiquitin ligases (E3)
HECT type E3
130630258
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
IQ
Motif
Other DBs
NCBI-GeneID:
130630258
NCBI-ProteinID:
XP_057299665
LinkDB
All DBs
Position
2:23749094..23763138
Genome browser
AA seq
1038 aa
AA seq
DB search
MYNFDGQHKAGLKVSLGGVSKKIDKSTLLQSARDERIKREKTRKENGAAVTLQSWIRGCF
VRNILSKSYRNEFDREFMLLQKDLHNMNIRLAGLVQKLCLFYKASEDYQRLVSICQMLLK
LSSGKKLNLLMNEDLSSWILKIKTLLVLCCSNLHTLINPNITIPLRMIEVFTEAHTYNWL
GESKSINISTDITVNLVLKGYFHHLRELVNKRVPSSIEPSPHPPTPFAAAAKDLFLKPLL
LQDKYTTSPASANSRQLVYSTFITDLLSPSMSEQVCFFVVPAIASEIPFSSFLQCIATTQ
HHHTVWTLYSFLHVCECHIENTSPDEIKNIVSALRILIPKLKPQKENGSSATNSYESDSD
DSDVEMDAVVTVPDSRCLSYVKEKCMSVLNEKNITAAILNFIKHRQAFSCDDYSRYIRDL
CAISHHLLVHMHTPVHRWKLLYSLAFNADFMYSCWSELMALKTNTFSGKDVNLIHQLSHG
YTMSREDQSRLLPLLGVFASLFRYALFSIYDSDFYGDTKTTGSRLMPFSLRELADMSQIL
RDVVLGLITFMYPDIKSAPETENWQLLCQTVTLLLKQLYSRDSRHRFCPENHWLSTKAAV
SQESLNISSFMKQEDDDVQLEEIFKPGMSTINARSLAILRYVPFAVPFMQRVRIFQRILT
EDKNDSLNVEQTVIPSHGLNITVNRKYLYQDAYDQLSEDRASDVKKPVRVHMINAQGLNE
AGIDGGGVFREFMSQLLKTGFDPSYGFFKTTSQQLLYPNPDVERIQPDYIKHLHFLGRML
GKIIYESMMVELPLADFFLCKLLSKQGADVDIHQLESLDPELYKNLLYLKNYEGDVDDLA
LNFTVVQSDYGETRVEELKPGGRDICVTNSNRIEYIHLMADYRLNKQIRSHCNAFRAGLA
DVINIEWLQMFDHRELQILISGAEIPVDMHDLRQNTNYSGSYTGDEAYINEFWNILYSLT
DKQKRQFLKFVTSCSRPPLLGFSELYPQFCIHYGGEEDRLPTASTCMNFLKLPRYKNTEL
LRARLIYAIEAEAGFELS
NT seq
3117 nt
NT seq
+upstream
nt +downstream
nt
atgtataattttgatggccagcacaaagctggcttgaaagtatctcttggaggggtatct
aaaaagattgacaaatcgacactccttcagtctgccagagatgagcgtattaaacgtgag
aaaacacgaaaagaaaacggtgctgcagtaacgttgcaatcttggattcgtggttgtttt
gttaggaatatattgtcgaagagctaccgaaatgaatttgatcgtgagtttatgctgttg
caaaaagatttgcacaacatgaacatacgcttggcaggcttagtccaaaagctttgtttg
ttttataaagcatcagaggactatcaaaggctcgtttcaatttgtcaaatgttgctaaag
ttgtcatctggtaaaaaattgaatttgctgatgaatgaggatttatcaagttggattctg
aaaatcaagaccttactcgtcctttgctgcagtaacctacataccttaatcaacccgaat
ataaccattcctctacgaatgattgaagtgtttactgaagcacacacatataactggctt
ggagaaagtaaatctatcaatatatctacagatataacagttaatttagttttaaaagga
tactttcaccatctgcgagaattagtgaataaacgagttccttccagtatagaaccttca
ccacatcctccaacaccattcgctgcagcagcaaaagacttattcttaaaaccactttta
cttcaagataaatataccacgtctccagcgtcagcaaattcgaggcagctggtttattct
acatttatcaccgaccttttgtcaccttccatgtccgagcaagtttgcttcttcgttgtt
cctgcaattgcaagtgaaattccattctcatcatttcttcaatgtatcgctacaactcaa
catcatcatactgtgtggacattatattcgttcttacatgtttgtgaatgtcatatagaa
aacacatcaccagatgaaataaagaacatcgtttcagcattaagaattctaattccgaaa
cttaaacctcaaaaagaaaatggtagcagtgcgacgaacagttacgaatctgactctgat
gatagcgacgttgagatggatgcggttgtcacggtacccgacagccgatgtttatcatat
gttaaagagaaatgcatgagtgtgttgaatgagaaaaacattacggcggctatcttaaac
tttataaaacacaggcaagcatttagttgcgatgactacagccgttacattcgagaccta
tgtgctattagccatcacttgctggtacacatgcataccccagtccataggtggaaacta
ctctattcgcttgcatttaatgctgacttcatgtattcatgctggtctgaactaatggcg
ttaaagaccaacactttttctggaaaagatgtgaatctcattcatcagctttctcacggg
tacaccatgtcaagagaggatcagtctcgattattaccactactgggagtttttgcctcg
ctttttcgctatgctttattttctatctacgattcagacttttatggtgatacaaaaacc
accggttcaaggttaatgcctttctctctgcgagaacttgctgatatgtctcagattttg
agagatgttgtccttggcctcatcacatttatgtatcccgacataaaatctgcaccagaa
accgagaattggcaacttttatgtcaaacagtgacactgttactgaagcagttatactcg
cgggattcgagacatcgcttctgtccagaaaatcactggctttccaccaaagcggctgtg
agtcaggaaagtttgaatatttcgtcgttcatgaaacaagaggatgatgatgtgcaacta
gaagagatctttaaaccaggaatgagtacgatcaacgcgagaagtttagccatcttaaga
tacgtgccattcgctgtcccttttatgcagcgtgtcaggattttccaacgtattctaact
gaagacaaaaacgactctttaaatgtcgagcaaactgtcattccatcgcacggcttgaat
ataaccgtcaaccgaaagtatttataccaagacgcatatgaccagttatctgaagatcga
gcctccgatgtgaaaaagccagtccgtgtgcacatgattaatgcgcaaggtcttaatgag
gcagggattgatggtggaggcgtgttcagagaatttatgtctcagctcttaaaaactgga
tttgatcccagctacggcttcttcaagaccacgtctcaacaacttctctacccaaatccc
gatgttgagcggattcaaccggattatattaagcacttacattttcttggtcgaatgctt
ggtaaaataatctacgaatcaatgatggttgaattaccgttagccgatttctttctgtgc
aaattgttaagtaaacaaggcgccgatgtggatattcatcaactggaatcgttagatccg
gaactttataaaaatttgttatatctaaaaaattatgaaggagatgtggatgatttggcg
ttaaatttcaccgttgtgcaaagtgattatggagaaaccagggtggaagagcttaaacct
ggtgggcgagacatctgtgtaactaatagcaacaggatcgaatatattcatttaatggcg
gactacagattaaataaacagattcgcagtcattgcaacgcttttcgcgcaggtttagct
gacgtcatcaatatcgaatggttgcaaatgtttgaccacagagagttgcaaatcttaata
tcaggagcagaaattccagttgatatgcacgatcttcgacagaacacaaattattcaggt
tcatatacgggggacgaagcgtacatcaacgagttttggaacattttatactcactcacc
gacaaacaaaaaagacaatttttaaaatttgtgacaagctgttcgagacctcccctgttg
ggattttcagagttatatccacagttttgtattcattatggcggcgaagaagacagatta
cccactgccagtacttgcatgaactttttaaaactaccaagatataaaaacacagaactg
ttgcgagcaaggttgatatacgcgatcgaggcggaggctggttttgagttaagctaa
DBGET
integrated database retrieval system
