Hydractinia symbiolongicarpus: 130630292
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Entry
130630292 CDS
T09218
Name
(RefSeq) patched domain-containing protein 3-like isoform X1
KO
K12385
Niemann-Pick C1 protein
Organism
hsy
Hydractinia symbiolongicarpus
Pathway
hsy03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
hsy04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
hsy00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
130630292
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
130630292
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hsy02000
]
130630292
Transporters [BR:
hsy02000
]
Solute carrier family (SLC)
SLC65: NPC-type cholesterol transporter
130630292
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sterol-sensing
Patched
MMPL
ACR_tran
Motif
Other DBs
NCBI-GeneID:
130630292
NCBI-ProteinID:
XP_057299714
LinkDB
All DBs
Position
2:24201539..24224838
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AA seq
934 aa
AA seq
DB search
MPPQGLNDQDMAANSVRDMQVADDNETVDSPGCCKRCTDRIILALEGWFAKLGYFVASYP
VPTIVIAVIVSLTCLAGLVEYYAENRGEKLWVAADSQGLKHQEWVEDRYPPQFRVVTIIV
EDSNVLTTATFKALIEVDQKIKKIGNGTDISWDKMCLPPCIPNTILSLWNYNYAKIKSLD
QNAILKDVNNPKPVKFGDPVPLTLLLGEISYDNNKNITGAKATKMSYFLKNQEVFVKSKG
RKIDEKGEEWETEFDNVFKIEIPGVKIYRYSITGFQEDSRSSLGNDLQFLFVGYILIIVY
LAVMLGSFSRINHKVWLAFAGVICIGLSIGIAYGLSSAFQLFVSPVHNILPFLLLGIGVD
DVFVIVQNWNNFGGPENKDNAIPENVAVAMRHAGVSILVTSFTDICAFLIGATTVLPALR
SFCIFAGIGVFAVFILTCTFFVAWLALDSRRQRAFRDACLCCITIRDSWQPLECSKRNYL
QSFMANTYSKAILSVPGMVVCMTIFVGLLAGGCYGLSELKQDFDFDWFLPPDSQTVAYNK
AIDKYFSTEGINTNVYVGEVDYFAEQSKLDELYNKITKDKHIVSELTLSWYENYKQFLKT
EINSTLLNETTSLPKSEADFYTYLWRFLDSPSGLRFKGDVKNNTKTEKIMTTRIRATHVK
LEGAANEIKAMDSLQESVNEVVFNNGFETFAYTRFYISWETNKIISTELIRNLALAGIIV
FLVTLFLIANLWVSLLVVTCVVFTLINIAGYMHFWGLTVDTVTTIQLILAIGLSVDYSAH
IGHGFMASRDGDRKARAAHALEEIGPAVVHGGFSTFLAFVFLAGSESYVFSTFFKLFFLV
VVFGMFHGLVYLPIMLRLIGPKPYAKVISHEKTPVEMKSVNHEDRFSPIPDPHHKQNGNA
DNNQLSPQTIYDKENSEIKNEKNGSISVDNEAYE
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
atgcctcctcaaggactgaatgatcaagacatggctgcaaattctgtcagagatatgcag
gttgcagatgataacgaaacagtggatagtcctggttgctgtaagcgatgtactgacaga
atcatactggcattagaaggatggtttgcaaaattaggctattttgtcgcatcttatcct
gttccaacgattgtgatagccgtgattgtttccttgacttgtcttgctggcctagtggaa
tattatgccgagaatcgaggggaaaaattatgggtagctgcagattctcaagggctaaag
catcaggaatgggttgaggatagatatccaccacagtttcgtgttgttacaattattgta
gaagattcaaatgttttaacaactgcaaccttcaaagcacttattgaagttgatcaaaaa
ataaaaaagattggtaatggtacagatatatcctgggacaaaatgtgtttaccgccttgc
ataccgaatacaattctgtcactttggaattataattatgcaaagatcaagtccttggat
caaaatgccatattgaaagatgtaaataacccgaagccagtaaagtttggtgatcctgtt
cctcttacgctattacttggtgaaatatcttatgacaataataaaaatatcactggagca
aaagcaaccaaaatgtcttactttcttaaaaatcaggaagtgtttgtcaaaagtaaaggc
agaaagattgatgaaaaaggagaagaatgggaaacagagtttgacaatgtttttaagatc
gaaataccaggtgtaaagatatatagatattcaataacaggatttcaagaagattctagg
tcaagtcttggcaatgacttgcagtttctcttcgttggctacattctcatcattgtctat
ctagctgttatgctgggtagtttttcacgaatcaatcataaagtttggctggcatttgct
ggagtgatttgcatcggtttgtctatcggcattgcgtatgggctatcaagtgcattccag
ctttttgtctcgcctgttcacaatattctgccattcttattgttaggcattggtgttgat
gatgtgtttgttattgtgcagaactggaataactttggtggtccagaaaacaaagacaat
gcaataccagagaatgtcgcagttgctatgcgtcatgctggcgtatccattcttgtgacg
tcatttactgacatatgtgcgtttctcattggtgctaccaccgtgcttcctgcgttaaga
tcgttttgtatctttgctggaataggagtatttgcagtttttattctgacttgtacattc
ttcgttgcatggcttgcattggatagcagaaggcaaagagcctttcgcgatgcttgtctt
tgttgtataactattagagattcgtggcaaccattggaatgttcgaagagaaattacttg
caatcgttcatggcgaatacttactcgaaagccattttatccgtgccaggaatggtcgtg
tgcatgactatattcgtgggtttgttagcaggcggttgttacggtttgtcagaattaaaa
caagactttgatttcgactggtttcttccaccagactctcaaactgtcgcttataataaa
gctatcgataagtatttctcaacagagggtataaacacaaatgtttatgttggagaggtg
gattattttgcagaacaatcgaaacttgacgagttgtacaataaaatcaccaaggataaa
catatcgtgtctgaactcactttaagttggtacgaaaattataaacagttcttgaaaacc
gaaatcaactcgacgttgttgaatgagactacttcacttccaaaatctgaggcggatttt
tacacatacttatggcgatttctggatagtccctcgggacttcgttttaaaggtgacgta
aagaataataccaagaccgaaaaaattatgacgactcgtatccgtgctacgcatgtgaaa
ttagaaggagccgcaaacgaaataaaagcaatggatagcttacaggagtcagtcaatgaa
gttgtttttaacaatggctttgaaacatttgcatacactcgtttttacatatcgtgggaa
acgaataagatcatcagtacagagttgatacgcaacttagcgttagctggaatcatcgtt
tttcttgtcactctgtttttgattgccaacttatgggtgtctttacttgtggtcacatgc
gtcgtcttcaccttaattaacatagctggctatatgcacttttggggattaacagttgat
acagtgaccacgatccaactcatccttgctattggtctttcggtggattattccgctcat
attggacatggttttatggcgagtcgtgacggtgatcgcaaagctcgagcagcacacgcc
ttagaggagattggtcctgcagtcgtccacggcggatttagtacatttctagcttttgta
tttctcgctggttccgaatcgtacgtgttctcaacgttttttaagttgttcttcctggtg
gtcgtttttggtatgtttcacggcttagtctatctgccaatcatgcttcgattaattgga
ccaaagccttacgcaaaagtcattagccatgaaaaaacacctgtagagatgaagagtgtt
aatcacgaggatagattttcaccaatacccgatccacaccacaagcagaacggaaacgca
gataacaaccagttaagcccgcaaacaatctacgataaggaaaatagcgaaataaaaaac
gagaagaatggatcaataagtgtggataacgaagcatatgaatga
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