Hydractinia symbiolongicarpus: 130630319
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Entry
130630319 CDS
T09218
Name
(RefSeq) polypyrimidine tract-binding protein 1-like
KO
K13218
polypyrimidine tract-binding protein 1
Organism
hsy
Hydractinia symbiolongicarpus
Brite
KEGG Orthology (KO) [BR:
hsy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsy03019
]
130630319
03041 Spliceosome [BR:
hsy03041
]
130630319
Messenger RNA biogenesis [BR:
hsy03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
130630319
Spliceosome [BR:
hsy03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
130630319
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_occluded
RRM_8
RRM_PARP14_3
RRM_NFXL1
RRM_3
RRM_MARF1
POTRA_1
Motif
Other DBs
NCBI-GeneID:
130630319
NCBI-ProteinID:
XP_057299760
LinkDB
All DBs
Position
2:complement(24920291..24932311)
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AA seq
510 aa
AA seq
DB search
MSDNSLANRNSVGNKRTHPDDLNDMENNKKVKHEQQTPSKVIHIRQLPHDANEAEVKALG
LPFGRVTNMLLMKNKSQAFLELQDVDSAKTMINYYTYVSPTVRNTPVFLQFSQHQELRTN
NQNRDVDQQNGGSADSGRQSGRVLKVIVSNIIYPVTIEVLQQVFQRCGDLQKIVTFIRND
QYHALIQYSNPKEAAAAKTLFDHQNIYNGCNTLHVEFSKMTELVVKYNNDKMRDFTKPDR
QSLDPMNAQIQAIQAQMNPGMLPVPGSFPPQLFPQGLNLGGGFPGMMGNVSPGSNMNFGQ
QMMGHHHHGMGSRHGSVLLVSNLTEEEITCDDLFILFGHYGDVQRVKILFNKKDTALIQF
ADPSQASTALQNLNNITLYGQEMRVSRSKHDNVNMPKAEDEGKELTKDYSNSPLHRFKKP
GSKNFQNIFQPIRTLHLSNIPESVSEEELQEMFSENGSISNFRFFPKDRRMALMQMSSVE
EAIVCLIKLHNKKLNESSHLRVSFAKNEMQ
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atgagtgataattcactggctaatcgcaattctgttggaaataagcgtacacacccggat
gatttaaacgatatggaaaataataaaaaagttaaacatgagcaacaaacaccgtctaaa
gttatacacattcgtcaacttccgcatgatgcaaatgaagccgaagtaaaagcacttgga
ctaccttttggtagagtcactaatatgcttttaatgaaaaataaatctcaagcatttctc
gaacttcaggacgttgatagcgcaaaaactatgataaattattacacatacgtttcacct
actgtccgaaatacacctgtcttcttacagttttctcaacatcaagagcttcgaacaaat
aatcaaaacagagatgtagaccagcaaaatggtggtagtgcagactctggccgacaaagt
ggtcgcgtattaaaagtaattgtttcaaacatcatatatcctgtcacaattgaagtacta
caacaggtttttcagcgttgtggggaccttcaaaagattgtcacgtttattcgcaatgat
cagtaccatgcattgatccagtactctaatccgaaagaggcagcagctgccaaaacactt
tttgaccaccaaaacatatacaatggttgcaacacactacatgttgaattctccaaaatg
actgagctggttgttaaatataataacgataaaatgagagattttactaaacctgatcga
caaagcctagacccaatgaatgcacagatacaagcaattcaagcacaaatgaatcctgga
atgcttccagtcccgggatcttttccaccacaactttttcctcaaggattaaacttagga
ggtggttttcctggtatgatgggtaatgttagccctggctccaacatgaattttggtcaa
caaatgatgggccatcatcatcacggcatgggaagccgccatggcagcgttctacttgtc
agcaatttgactgaagaagaaataacttgtgatgacttgttcattcttttcggtcattat
ggtgacgtgcaacgtgtaaaaattttattcaataaaaaggatactgcattaatacaattt
gctgacccatcacaagcatcaacagcactgcaaaacttaaataacataacattatacggt
caagagatgagagtatctcgctcgaaacacgataacgttaatatgccgaaagctgaagat
gagggaaaggagttgactaaggattattcaaactcccccttacacagattcaagaaacca
ggatcaaagaattttcaaaatatctttcaaccaattcgaactcttcatctttccaatata
ccggagtctgtaagcgaagaagaactccaggaaatgttttccgagaacggttccatctcg
aacttcaggtttttcccaaaagaccgccgaatggcgctcatgcaaatgagttctgtggag
gaagccatcgtctgcttaataaaactccacaacaaaaaattaaatgagtcaagtcacttg
cgcgtttcgttcgcaaaaaatgaaatgcaataa
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