Hydractinia symbiolongicarpus: 130630361
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Entry
130630361 CDS
T09218
Name
(RefSeq) DNA polymerase delta catalytic subunit-like
KO
K02327
DNA polymerase delta subunit 1 [EC:
2.7.7.7
]
Organism
hsy
Hydractinia symbiolongicarpus
Pathway
hsy03030
DNA replication
hsy03410
Base excision repair
hsy03420
Nucleotide excision repair
hsy03430
Mismatch repair
hsy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hsy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
130630361
03410 Base excision repair
130630361
03420 Nucleotide excision repair
130630361
03430 Mismatch repair
130630361
03440 Homologous recombination
130630361
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hsy03032
]
130630361
03400 DNA repair and recombination proteins [BR:
hsy03400
]
130630361
Enzymes [BR:
hsy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
130630361
DNA replication proteins [BR:
hsy03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
130630361
DNA repair and recombination proteins [BR:
hsy03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
130630361
MMR (mismatch excision repair)
DNA polymerase delta complex
130630361
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
zf-C4pol
DNA_pol_B_2
Motif
Other DBs
NCBI-GeneID:
130630361
NCBI-ProteinID:
XP_057299818
LinkDB
All DBs
Position
2:complement(26006407..26022850)
Genome browser
AA seq
1078 aa
AA seq
DB search
MASKRKNASLSKPEVKRQKSELDDFPSSFEDDLALLDSLENEKKDNSAHSSNKKWMRPPV
GKLDPKSDPLIFQQVEVDHYVGQHFSGMPGCTTGPTPIIRFYGVTMEGNSVMCHVHGFVP
YFYIPAPVGFKTEDCVTFREALNKTVLGDLRSNKDNVTQAVLNVELVMKENIYGFNGNKK
MPFLCVTVALQKLVAPARRLLECGISVSGYGERSYKTFESNIDFEVRFLVDTNTVGCNWI
ELPTDAYKVRTTNKTSRCQIEVDVAYDRFISHAPEGEWDKIAPLRVLSFDIECAGRKGIF
PEPEIDPVIQIANMVVCQGEKDPFIRNVFTLNTCAPVVGCDIHSYQKEKDLLQAWSDFVN
EVDADIITGYNIVNFDFPYLLNRANTLKIDRFSCIGRILGEKSVVSTTTFQSRAYGKREN
KVINISGTVQFDLLHVLLRDYKLRSYTLNSVSYHFLKEQKEDVQHSIITDLQNGTNQTRR
RLAVYCMKDAILPLRLLEKLMCIINYIEMARVTGVPLSYLLSRGQQIKVVSQLLRKSKLQ
DLILPAQKIDAGDEYEGATVIEPVKGYYNMPIATLDFASLYPSIMMAHNLCYTSLLMKKD
AAKLSPDEYIITPCGHHFVKAHLRKGLLPEILEHLLSARKKAKADLKNETDPFKKKVLDG
RQLALKISANSVYGFTGAQVGKLPCLEISSSVTAFGRQMIERTKQLVEDRYNIKNGYKHD
AKVIYGDTDSVMVKFGTETVPDSMELGKEAAAYVSEYFTKPIKLEFEKVYFPYLLISKKR
YAGLYYSRPDTFDKMDCKGIETVRRDNAPLAAKLINTCLQKLLIERDPDGAVEYTKQVIS
DLLCNRIDISELVITKELTKTEDEYGAKQAHSVLAEKMRKRDAGSAPKLGDRVPYVIVAG
VKGAKAYEKAEDPIYVLENNIPIDTKHYLEHQLMNPLIRIFEPILGEHKANNVLFKGEHT
LVKTVVTAKVGGLARFAKKVATCLGCKAVLRKGRENAAVCEHCENRESDLFQKEITTLHS
LEEKFNKLWTQCQRCQGSLHEDVLCTSRDCPIFYMRKKTQKDLAQQDLLVQRFGDFSW
NT seq
3237 nt
NT seq
+upstream
nt +downstream
nt
atggcaagcaagagaaaaaatgcatctttgagtaagccagaggtaaaacgtcaaaagtca
gagctggatgatttcccaagttccttcgaagatgacttggcattgcttgattcacttgag
aatgaaaaaaaggataactctgcacacagttccaacaaaaaatggatgcgacctccagtt
ggcaaacttgatccaaaatcggatccactaatatttcaacaggttgaggtggatcactat
gttggccagcatttctcagggatgcctggctgcacaactggccccacacctattattcga
ttttatggagtaacaatggaaggaaacagtgtcatgtgtcacgtacatggatttgtgcca
tacttttatattcctgctccagtaggatttaaaacagaagactgtgtgacatttagagaa
gcgttaaataaaactgtgcttggggacttgcgctcaaacaaagacaatgtgacacaggct
gttctcaacgttgagctggttatgaaagaaaatatatatggctttaatggtaataagaag
atgccatttttgtgtgtcactgtagcgctgcaaaagcttgttgcacctgcaagacgcttg
ttagagtgtggtatttcggtttctgggtatggcgaaagaagctacaaaacattcgaaagt
aatatcgattttgaggttcgttttctggtggatacaaacacagtgggttgcaactggata
gaactacccactgatgcgtacaaagtaagaactactaataaaacatcccggtgtcaaatt
gaagtcgatgttgcttatgacagattcatcagtcacgcacctgaaggtgaatgggataag
attgcgccgttacgtgttttaagtttcgatattgaatgtgctggcagaaaaggcatattt
cctgaaccggaaattgatccagtcatccagatagccaatatggtggtgtgtcaaggagaa
aaagatccatttatccgcaatgtttttacattaaacacatgtgcaccagtagttggctgt
gatatacattcatatcaaaaggagaaagacttgctgcaggcatggtcagattttgtaaac
gaagtcgatgctgacatcatcactggctacaacattgttaactttgatttcccatacttg
cttaaccgtgcaaacaccttaaaaattgatcgcttctcatgcataggacgtattttgggt
gaaaaaagtgttgtttctactacaacgtttcaatcaagggcatatggaaaacgtgaaaat
aaagttataaatatatcgggaactgtacaatttgatttgttacatgttttgttgcgagat
tataagttgagatcatacacactgaactctgttagttatcattttctaaaagaacaaaaa
gaagatgtacagcattcaattattacagatttacagaatggtaccaaccaaactcgtcgt
cgtttggccgtgtattgtatgaaagatgcaattctaccattaagacttcttgaaaagttg
atgtgtattataaactatattgaaatggcacgtgtgactggtgtaccattgtcatatcta
ttgtcacgtggtcaacaaataaaggtggtatcacagttgctaagaaagtcgaagcttcaa
gatctgattcttcctgcacagaaaattgatgcaggtgatgaatatgaaggtgcaactgtt
attgaacctgtgaagggatattacaacatgccaatcgcaacgctggattttgcttctttg
tatccctctatcatgatggcgcacaatttgtgttacacatcccttctcatgaagaaagat
gctgctaagcttagtcctgacgaatacatcatcacaccttgtggtcaccatttcgtgaaa
gcacatcttagaaaaggcctgttaccggagatcttagagcatttattaagtgctcgaaaa
aaagctaaagctgatttgaaaaatgaaacagatccatttaaaaagaaggttttggatggt
cgacagttagctttgaaaatcagtgctaattctgtgtatggttttactggtgcccaagtt
ggtaaactaccctgtttagagatctcgtcaagtgtgacagcctttggtcgacagatgatt
gaaagaacgaaacaacttgttgaagatcggtataatattaaaaatggctacaaacacgat
gctaaggtcatatatggtgacacagattcagtaatggtaaagtttggcactgaaactgtt
cctgacagtatggagttaggaaaagaagcagcagcctacgtttctgaatatttcactaaa
cctatcaagcttgaatttgagaaggtctattttccatacttgttaatcagtaagaagagg
tacgcgggtctgtattattcacgtccagacactttcgataaaatggattgcaagggaatt
gaaacggtgcgtcgggacaacgccccgctggcagccaaacttatcaacacgtgtttacag
aaactgttgatagaaagagatccagacggcgcggttgaatatacaaaacaagttatatca
gatctactttgcaatcgtatcgatatttccgagctggtcattacaaaagaactgacgaaa
acggaagacgaatatggcgcaaaacaggcacattcagttttagcagaaaaaatgcgtaaa
agggatgctggttctgctccaaagttgggtgatcgagtcccttatgttattgttgcaggg
gtaaaaggagcaaaagcgtacgagaaagcggaggatccaatatatgtgcttgaaaacaac
attccaatcgatacgaaacattatcttgaacatcagctgatgaatcctcttattcgaatc
tttgagccaatcttaggagagcacaaagcaaacaatgtcttgtttaaaggtgagcacaca
ctagttaaaactgtcgtcacagccaaggttggtggattggcaagatttgcgaaaaaggta
gcaacctgtcttggatgtaaagcagtattaaggaaaggcagagagaatgcagcagtgtgc
gaacattgtgagaatcgtgaatctgatttatttcaaaaggagatcacaacgttgcattcg
ttagaagagaaatttaacaaactgtggacacagtgtcaacgatgtcagggaagtttacat
gaagatgtgttgtgtacgagtcgagattgtccaatcttctatatgcggaagaagactcaa
aaagatttagcacaacaggacctgcttgttcaacgtttcggagatttttcctggtga
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integrated database retrieval system
