Hydractinia symbiolongicarpus: 130630375
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Entry
130630375 CDS
T09218
Name
(RefSeq) WD repeat-containing protein 18-like
KO
K14829
pre-rRNA-processing protein IPI3
Organism
hsy
Hydractinia symbiolongicarpus
Brite
KEGG Orthology (KO) [BR:
hsy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hsy03009
]
130630375
Ribosome biogenesis [BR:
hsy03009
]
Eukaryotic type
Pre-60S particles
5-FMC complex
130630375
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
Beta-prop_EML_2
EIF3I
Beta-prop_CAF1B_HIR1
WD40_WDHD1_1st
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
WDR55
Beta-prop_EML
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
NBCH_WD40
WDR90_beta-prop_4th
WD40_MABP1-WDR62_2nd
Beta-prop_NWD2_C
Beta-prop_IFT140_1st
Beta-prop_IFT122_1st
ANAPC4_WD40
Beta-prop_DCAF4
WD40_RFWD3
WDR54
Beta-prop_Vps41
Beta-prop_VPS8
Beta-prop_SPT8
Beta-prop_SCAP
Candida_ALS_N
Motif
Other DBs
NCBI-GeneID:
130630375
NCBI-ProteinID:
XP_057299834
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Position
2:complement(25921332..25931170)
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AA seq
440 aa
AA seq
DB search
MEVGVFTDSTGEQSCVSLWNLSNGVLLKSFKNGACAKNGVSFVGDDYVIAAQHQKQLLHI
YDTHKEQLVKKIVCPGKITAMAVTPDGKYCVVALVEKIYVWQLCTGDLMAILSKHYQAVT
CIRFVQDGSFFMTAGDDNLLLVWKFANVLQPKDPISNHNVCEHPFHTLSHHSMPVKSIHV
GVGGMRCRIATCSLDQTCKLFDLISGKMLCSFVFNVGCSAVTMDIPESRLFAGTMDGRIY
NVKLYDKKAKETHVSSESVIKAHTKEVTSLSVCMDGTKMLSGSLDSSVKLWHINSQQCLR
TFSFKGEVTNAFVMPYPTFLQDRAVAPIKCGIENFKRTTTVRGGDTCSWSTMSDENTIPV
VLKDIREDEETHASWYLEQALLECSYQESSSTKNTLKTATRSELLQRISALESMAQEFYT
YAGEKLIKDATSTEQSTGQT
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atggaggttggagtatttacagacagtactggagagcagtcatgcgtatcactatggaat
ctatccaatggcgtgctattgaaaagttttaaaaatggcgcatgtgctaaaaatggtgtc
agtttcgttggtgatgactacgtcattgcagcgcaacatcagaagcaacttctacatata
tacgacacacataaggagcagctggtgaagaaaattgtatgtccgggtaaaattacagct
atggctgttacaccagatggaaaatattgtgttgttgcactggtggagaaaatttatgtc
tggcagctatgtacaggtgacttgatggctatattaagtaaacattaccaagctgtgaca
tgtattcgcttcgttcaagatggtagcttttttatgacggcaggagatgataacctgttg
ttagtgtggaagtttgccaacgtactacaaccaaaagatccaataagcaatcataacgtg
tgtgaacacccttttcatacactttcacatcattccatgcctgtcaaatccattcacgtt
ggagtcggtggaatgagatgtcgtatcgccacctgctcactggatcaaacatgtaaattg
ttcgatttaatctctggaaaaatgctatgttcgtttgtttttaatgtcggatgttctgct
gtaaccatggatataccggaaagtcgcttatttgctggaacgatggacggtagaatctac
aatgtaaagttatacgacaagaaggcgaaagaaacacatgtatcaagcgagtcagtcata
aaagcacatactaaagaagtgacatcactttctgtgtgtatggatggaactaaaatgctt
tctggttcactggattcatctgtcaagttatggcatataaacagtcagcagtgtttgaga
acgttttcatttaaaggtgaagtaaccaatgcttttgtaatgccatacccgacgttcttg
caagatagggctgtcgcaccgattaaatgtggtatcgaaaactttaaaaggacaacaact
gtgcgtggtggtgatacatgcagttggagcacgatgagtgatgaaaacactattcctgtg
gtcctcaaagacatacgagaggatgaagaaacacatgcatcgtggtatttggaacaagca
cttcttgagtgttcgtatcaagagagcagttcaacaaaaaatacattgaaaacagccaca
cgttcggaattactacaacgaatatcagcgctggaatctatggcgcaagaattttataca
tacgctggtgagaagttgatcaaagacgcgacgagtactgaacagtcaactggacagacg
taa
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