Hydractinia symbiolongicarpus: 130630475
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Entry
130630475 CDS
T09218
Name
(RefSeq) nuclear pore complex protein Nup155-like
KO
K14312
nuclear pore complex protein Nup155
Organism
hsy
Hydractinia symbiolongicarpus
Pathway
hsy03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
hsy00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
130630475
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsy03019
]
130630475
Messenger RNA biogenesis [BR:
hsy03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
130630475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_C
Nucleoporin_N
Motif
Other DBs
NCBI-GeneID:
130630475
NCBI-ProteinID:
XP_057299970
LinkDB
All DBs
Position
2:27797770..27821884
Genome browser
AA seq
1349 aa
AA seq
DB search
MEVLPGKQFVPEMLTMSLKEVDQQMLNDSKSPLLEEQLSCNVYPTLSGMKDFDYPLIPIF
TDNASTTSTYEKQLTSIKRVPLPDELVEQFSHMQCNCVMGVFPEISRAWLAIDSDIYFWI
YEDGTDVAYYDGIKEVILAAGLIQPKEGVFHDHIKYLLCVTTPVTIYLFGISFSPKDPIM
CGNSHGSIQLHPEALFTVPTDNIYMTSVCGTNNGRIFLAGKDSCLHEIVYKTQSSWFGKQ
CYRVNHTASKMSFLVPAFLSYVFSSDDPVCQLAIDNSRGTLFCRTEAGDIKVYYLGQNME
HMNFVAGLNMSSITKQAQYVVRTVDSRYFEKIVHVAPVPRTDSAYIHAVAITQAGVRLYF
TTTNINDPHGEPSCLKLVHVRMPTGFAPSIAYEKPSNVHTGFYRKGTSLLIANVSEGLDR
MWCFGQDLFPFKSPLKESQSVARIDGHTWCLTEIPDFSDTSGVPYYLFNEEFPDPPAVVT
EHVLPIRRFVLLSAQGSHIITTLRPLDQLRMLLHASCSGESDTIESFFKHYGVDQACAIC
LILICQCVESEGQLIDLATQAFFRYGGETSETSGYLGRTTVSANNFNAIPNTICSPIQGG
SSEGSYLSTPHGYHPQSIQTPAPPSILNSTVIQPGAGTEQVSSHSGKHNGLYLYFSRILR
PVWNFPMIHLVAMEPKPQQFSSRLSASELSWFIELLTKLKNFIGSHSHIVAAQSPTYIHT
FVNSSSTDVQCANEKRSLDAFHQLLTLSIEALELWRILCEHNISTLYEALPMDVKEKLLH
TAFKDLFAPTGRELSSNLINAVMSMYLHDNSAVESISSKLRSVCPSLYSANDALCSKANE
LLIGISLLHNPVEKEKLAQEAIMIYSKVPDLVDLKWICNQLKSSSCYNEIVQLCLTTALK
QDPKGIALHFYKSGEPRDDIEGMESFAIRRESYMYIMDTLQELLASINTYPISSSLPSKP
GPPAPSENLISQETARKHFHGMLSQCLKSGDELFHVTLYQWFIRTNQTDRLLEIKSPFLE
QYLIATAAEQHPNNKEVLDLLWKFYEKNKNFMSAAKLLMKLSEKEGPTLTIQNRLEYLSR
ALISAKSAPVNTDIDGEFLQEVEEKLEVAQIQLKIFDQLSQKNIQANTKDKALIELNLKL
LDISTLYGDFAEVYSLHECKLAIVQCAGHSDVTLVEKIWQDIIETSFNECKSLSPASKMQ
TISQQIIHLGNTYVQHPRYFPINFLLLYLEKKSCEMHFNEPWVFTMLQQIGVSFPVLLQN
YVALHQSREKIWQRLGKPLHMFHVISCLFVNFLENITEYRAESLSLTRSIDERTTTFLVE
LETMNTSDLEVKNLLTRFKGVQARLKRML
NT seq
4050 nt
NT seq
+upstream
nt +downstream
nt
atggaggtgttacctgggaagcagtttgttcctgaaatgctaacaatgtcattaaaagaa
gttgatcaacagatgttgaatgattcaaaatctccacttctagaagaacagctgagttgt
aatgtgtatcctactttatctggtatgaaagactttgattacccgttaattccaattttc
actgacaatgcatcaacaacatcgacatatgaaaaacagttaacatccatcaaaagagtt
ccattgccagatgaacttgtggaacagttttcacatatgcaatgtaattgtgtgatgggt
gtatttcctgaaatcagcagagcatggttggcaattgacagtgatatttatttttggata
tatgaagatgggacagatgttgcatattatgacggaattaaagaagttattttagccgct
gggctaattcaacctaaagaaggtgttttccatgatcatatcaagtacctgctctgtgtt
acaacaccagtcaccatatatttatttggaataagcttctcaccaaaagacccaattatg
tgtggaaactctcatgggagcattcaactacatccagaagctttgtttactgttcctaca
gacaatatttacatgacctctgtgtgtggcacaaacaatggaagaatttttcttgctgga
aaagacagttgtttgcatgaaattgtatacaagacacaatcaagttggtttggtaaacaa
tgctacagggtcaaccatacagccagcaaaatgtcatttctcgttcctgcttttttatca
tatgtcttttcttcagatgatccggtatgccaacttgccatagacaattcacgaggaact
ttattttgcagaacagaagcgggtgatataaaggtttactacctaggacagaatatggag
catatgaatttcgtagctggccttaacatgtctagtataacaaaacaagcacaatatgta
gtcaggactgttgattctcgttactttgaaaaaatcgtacatgtggcaccagttcccagg
acagattctgcatatattcatgcagttgccataacacaagcaggtgtccgcctgtatttt
actactactaatatcaatgacccacatggggagccatcatgtctaaaacttgtgcatgtg
agaatgccaactggatttgcaccatcgatagcttatgaaaaaccatcaaatgtacacaca
gggttttacagaaaaggtacatctcttttgatcgcaaatgtgtctgaaggattggataga
atgtggtgctttggtcaagatttgtttccattcaaatctcctttaaaagaaagccagtct
gtggctcgtattgatggtcatacttggtgccttacagaaatacctgacttttctgacact
tctggggtgccatattatttatttaacgaagaatttccagatccacctgcagtagtaact
gagcatgtcttacccatccgaagatttgttctcctgagtgcacagggtagtcacatcata
actacattgagacctctggatcagttacgaatgttgttacatgcgagttgcagtggtgaa
tccgataccattgaatcttttttcaaacactatggtgttgatcaagcatgcgctatttgt
ctaatacttatatgtcaatgtgttgaatcagaaggtcagctgattgatcttgctacacaa
gcatttttccgttatggaggagaaactagtgaaactagtggctatctagggcggactaca
gtatcagcgaataatttcaatgcaatcccaaacacaatatgtagcccaatacaaggtgga
agcagtgaaggaagctatttatcaacaccacatggatatcatccacaatcgattcaaact
cctgcaccaccaagcattttgaattcgactgttatccagcctggtgctggtactgaacaa
gttagctcacactctggcaaacataatggactgtatttatatttctcaagaattttacgc
cctgtttggaattttccaatgattcatcttgtcgctatggaacccaaaccacaacagttt
tccagtcgtctctctgcttctgaattatcttggttcattgagctactgacaaaattaaag
aacttcattggttcacattcacacattgttgcagcgcaatctccaacttatatacatact
tttgtcaactcttcttcaacagatgttcaatgtgcgaatgaaaaaagaagtttagatgct
tttcatcagttgttgacgttgtccatagaagcactggagttatggagaatactgtgtgaa
cataacataagcaccctatatgaagctttacccatggatgttaaagaaaagcttttgcat
acagcatttaaggatctgtttgcaccaactggcagggagttaagctccaatctcataaat
gcagtgatgtcaatgtatttacatgacaactcggctgtcgagtcaatcagttcgaaactt
cgatcagtgtgtccgtcattatattctgctaatgatgcactctgcagcaaggcaaatgaa
ctgttaattggaatatcgttattacataatccagtcgagaaggagaaacttgcacaagag
gcaataatgatttattcaaaagtacctgacctggtcgatttaaaatggatatgtaaccag
ttgaaatcaagttcttgttataatgaaatagtacaattatgtctaacgactgctctaaaa
caagaccccaaaggaatagctcttcatttttataaaagtggtgaacctcgagacgacatt
gaaggaatggagagtttcgccataaggcgtgagagttacatgtacattatggatactctg
caagaactgttggcatctatcaacacgtatccgatctcttcttcactaccatcaaagccg
ggaccaccggcaccttcggaaaatttgatatcacaagaaacggctagaaaacattttcat
ggtatgctttcacaatgtttgaaatctggagatgagctgtttcatgtgacgttgtatcaa
tggttcattcgaactaatcagacagataggttgttagagataaaatcgccgtttcttgag
cagtacctgatcgccacagcagcagaacagcatccaaacaataaagaagttcttgatttg
ttgtggaagttttatgagaaaaataagaactttatgtctgccgccaaactgttgatgaag
ctgtctgaaaaagagggaccaactcttacaattcaaaatcgtttggagtatttatctcgt
gctttgattagtgctaaaagtgctcccgtaaatacagacatagatggagaatttcttcaa
gaagtagaggagaaactagaggttgctcagatccaacttaaaatatttgatcaactctcg
cagaaaaatatccaagccaacaccaaagataaagctcttattgagttaaatttgaaattg
ttggacatatctacgttgtatggcgattttgcagaagtttattcattgcatgaatgtaaa
ctggccattgtacaatgtgctggtcacagtgatgttactttggtggaaaaaatatggcag
gatattattgagacaagcttcaacgaatgtaaatcactaagcccagcaagtaaaatgcaa
acaatttcacaacaaataattcaccttggaaatacatatgtgcagcatccaagatacttc
ccaataaacttcttacttctgtacttggaaaagaaatcatgtgagatgcattttaatgaa
ccttgggtattcacaatgctccaacagattggtgtgtcatttccagttcttttacaaaat
tacgtcgctcttcatcaatccagagagaaaatctggcagcgtttgggaaagcctctgcac
atgtttcacgtgatatcgtgtttgtttgtcaactttctggaaaatattactgaataccga
gccgaaagtttatcactgacaagaagtatagacgagcggacaacaacctttcttgttgaa
ttggaaaccatgaacacaagtgatctggaagtcaagaatttgctaactcgatttaaagga
gtacaagctagattgaaaagaatgctgtaa
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