Hydractinia symbiolongicarpus: 130630486
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Entry
130630486 CDS
T09218
Name
(RefSeq) low-density lipoprotein receptor-related protein 4-like
KO
K20053
very low-density lipoprotein receptor
Organism
hsy
Hydractinia symbiolongicarpus
Brite
KEGG Orthology (KO) [BR:
hsy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hsy04131
]
130630486
Membrane trafficking [BR:
hsy04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
130630486
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
FXa_inhibition
cEGF
Ldl_recept_b
DUF5050
EGF_CA
BRCT_TopB1_SLF1
Motif
Other DBs
NCBI-GeneID:
130630486
NCBI-ProteinID:
XP_057299986
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Position
2:27963828..27977801
Genome browser
AA seq
1097 aa
AA seq
DB search
MKSTKTLLSYLLFMISLEWKSVYALPGSCSKDQFTCKNKECITNTWQCDGENDCGDNSDE
SDCDSIKKHRPCDESTNFRCKNKKCIPKSWTCDHVDDCGDNSDESNVDGPLCVKSDQCAR
DDFKCKVNGFCILQTFVCDGSNNCGDNDNSDEHDCKSRTCGEHQMKCDNGRCVSNDWKCD
KSDDCGDASDERNCSSKACPANRFKCVRSGHCIRGEYKCDGAKDCLDGSDEVGCIKTTQK
IPPMTTATTTTNTKVSSTLANSNQTHTDSLTFFKLLSTTSVSCNRYEYQCRFSKRCVHIS
WLCDGASDCRYGEDEDKKLCSENKCSDKEFRCLNGQCIDNVYRCDEKSNCYDGSDEKNCS
EILLPCSKHTHHCNNSDKCIDNSLLCNNKKDCPEGDDESNSCGVNECSSNNGGCLHYCRD
LPIGHICTCKPGYKLALDNKTCVDIDECSIFGRCSQGCVNFKGSFGCQCDKGYILDPVNR
RTCHAQAPHPRLILGDMGNIREMSTNDRKYKPLISDARSVRSIAVHVETEMIYWTGLTKK
KIYRASMSTGKIEVVLDSKTNKPEALAIDWVGHKLFWIDTFHNERICVSNLNGSHIKTLV
NASAKEQLIALAVYAEKGFIYWKSFHPDMPSPIKRANLDGTDRMTIVEKSNASDIAVDKT
LERIYWAGSESIYSCAVDGSDVRKVLSHIYPYLLTVFEDSVYWIDGGNHKLYTANKFTGR
FKKAFKEEFTFVTDILVYHPLVQNTVLHPCLKNNGGCSHLCFVSPNFNRTCACPDLMMLG
EDNKTCTRAGFLATTISIAATTSISMATTNSMATTTSMTTTSVKSTINTRTSSPSSRGAD
STSTATSTTPATSSITSAAASPTAADTTTMALTSAASTFTVDSSTPSTSSSITTHSLTAE
STFKVTSLSTSSTEANVTKVPLSNVKCTTQQYRCVSTGKCIPVRFICDGKSDCAQGEDEK
NCIDSRTKPSKSLSTIGVAFASCAALLFFVVVAVIVYRKKRRRSEFKMTYEMNRGMFYGK
NDGTEPEIKYLTNPSSSSENCKKNLNFDNVNFKEMDELKVPLHVSEMYGETVDNQPSDDS
SNDLCFDDTRPIISHML
NT seq
3294 nt
NT seq
+upstream
nt +downstream
nt
atgaagtctactaaaactttgctttcttatttactttttatgatttcgttggaatggaaa
tccgtttatgctctccctgggagctgttcaaaagatcagtttacttgcaagaataaagag
tgtattactaacacatggcaatgcgacggtgaaaacgactgtggagataacagcgatgaa
tcagattgcgacagcattaaaaaacacagaccctgtgatgaatcaaccaattttcgctgc
aagaataaaaaatgtattccaaagtcctggacttgtgatcatgttgatgattgtggagat
aacagtgatgaatcaaatgtggacggccctctttgtgtaaaatcagatcaatgtgcaaga
gacgacttcaaatgtaaagtcaatggattttgtattcttcaaacattcgtttgtgatgga
tcaaataattgtggtgacaacgataactctgatgaacatgattgcaagagccgtacatgc
ggggaacatcaaatgaagtgtgacaatggaaggtgtgtctctaatgattggaaatgtgac
aagagtgatgactgtggtgatgcaagtgatgaacgcaattgcagttctaaggcttgccct
gccaaccgatttaaatgtgttcgaagtggtcactgcattcgtggagagtataagtgcgat
ggtgcaaaagattgtcttgatggttcggatgaagttggatgcataaaaacaacacagaaa
attccaccaatgacgacagccacaacaactacaaacacgaaggtctcaagtacactagct
aattctaaccaaacccatactgactctctgacattcttcaagttactatcaacgacttct
gtatcatgcaacagatatgaataccaatgccgattctcaaaacggtgtgtccatattagt
tggctgtgtgatggtgcaagtgattgcagatatggagaagatgaagacaaaaaactttgt
agtgaaaataaatgtagtgacaaagaatttcgatgtttaaatgggcagtgcattgataat
gtatatcggtgtgatgaaaaaagtaattgttatgatggttcagatgaaaagaactgctct
gaaattcttttaccatgctccaagcatacacatcattgcaacaacagcgacaaatgtatt
gacaacagcttgctctgtaacaacaaaaaagattgtccagaaggcgatgatgaatcaaat
tcttgtggtgtcaatgaatgttcatccaataatggtggttgtcttcactactgcagagac
ttgccaattggtcatatatgcacgtgtaaaccaggctataaattggctctggacaataaa
acttgtgtggatatcgatgagtgttcaatttttgggcggtgcagccaaggttgtgtaaac
tttaaaggctcgtttggatgtcaatgcgacaagggttatatcttggatcctgtaaacaga
agaacatgtcacgcgcaagctcctcaccccaggctcatacttggagatatgggtaatatt
cgagagatgtcgacgaatgatcgaaagtacaaaccacttatatcagatgctcgaagtgta
agatccattgcagtacatgttgaaacagaaatgatttattggacaggtctgacgaaaaaa
aagatatatcgtgcttcaatgtctacgggcaaaatagaagttgtcctcgacagtaaaaca
aacaagccagaagcgttagcaattgattgggttggacataagttgttttggattgatacg
tttcacaacgaaaggatctgtgtttcaaatcttaatggttcccacataaaaactttggta
aacgcttcagctaaagagcaacttatagctcttgctgtttacgctgaaaaaggtttcatt
tactggaaatcattccacccagacatgccttcaccaattaaacgtgcaaacttagatggc
actgacagaatgactattgtagaaaaatcgaatgcaagtgacatcgcagtggacaaaacg
ctcgaacgaatttattgggcaggttcagaaagtatttattcttgtgcagtggatggtagc
gatgttagaaaagtactgtcgcatatatatccttacttgttgactgtgtttgaagactcg
gtttactggattgatggagggaaccataaactgtacactgctaataaatttaccggcaga
tttaaaaaggcctttaaggaggaattcactttcgtcactgatattctggtgtatcatcct
ttagtacaaaatacagttttgcatccatgccttaaaaacaatggcggatgtagccatctt
tgttttgtcagcccaaactttaatcgcacttgcgcatgtcccgatctcatgatgcttggt
gaagacaataaaacgtgcacgagggcgggtttcctggcaacaacaatttccatagcagca
accacttcaatttccatggcaacaacgaattccatggcaacaacgacttccatgacaaca
acttcggttaagagtaccattaatacacgtactagttcaccttcctctcgtggcgctgac
tctacatctactgctacttcgacaacaccagcaacatcttcaataacctcagcagcagca
tctcccacagctgctgataccactacgatggctttaaccagtgcagcctccacttttaca
gtcgattcttctacaccttcaacgtcctcgtccattaccacccattccttgactgcagaa
tccactttcaaagttacttctttatcaacgtcatcaacagaagcaaacgttacgaaggtg
ccactaagcaatgtgaagtgtactactcaacaatacagatgtgtctctacgggaaaatgt
attccagtaaggtttatctgcgatggtaagtctgactgtgcacagggcgaggacgaaaaa
aactgcattgacagcagaacaaaaccttcgaaatcgttatcaacgattggtgttgcgttt
gcttcgtgtgcagcgctacttttctttgttgttgttgctgttatcgtgtaccgtaaaaaa
agacgtcgttctgagttcaaaatgacgtacgaaatgaatcgaggtatgttttatggtaaa
aacgacggaaccgaacctgaaataaaatacttaacgaacccttcatcatcatctgaaaat
tgcaagaaaaatctgaactttgataatgtgaattttaaagaaatggacgaattaaaagtt
ccccttcacgtctcggaaatgtatggtgaaacggttgacaatcaaccgtcagacgattcg
tctaacgacttatgttttgatgatactagaccgataatatcgcatatgctatag
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